36 projects for "structure" with 2 filters applied:

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  • 1
    Obsidian Visual Skills Pack

    Obsidian Visual Skills Pack

    Generate Canvas, Excalidraw, and Mermaid diagrams from text

    LLM-TLDR is a Python-based tool designed to dramatically reduce the amount of code a large language model needs to read by extracting the essential structure and context from a codebase and presenting only the most relevant parts to the model. Traditional approaches often dump entire files into a model’s context, which quickly exceeds token limits; LLM-TLDR instead indexes project structure, traces dependencies, and summarizes code in a way that preserves semantic relevance while shrinking input size by up to 95 %. ...
    Downloads: 2 This Week
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  • 2
    Architecture as a code

    Architecture as a code

    Visualize, collaborate, and evolve the software architecture

    Architecture as a code is an open-source modeling language and toolkit that enables software teams to describe, visualize, collaborate on, and maintain software architecture as code. Inspired by the C4 Model and other architectural DSLs, LikeC4 lets you define your system’s structure in a textual DSL and then automatically generate consistent diagrams that reflect that design, ensuring that architecture documentation stays in sync with source code changes. The project includes command-line tooling, IDE integrations, live preview servers, and diagram exporters, letting developers instantly see architectural diagrams update as the model evolves. ...
    Downloads: 3 This Week
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  • 3
    city-roads

    city-roads

    Visualization of all roads within any city

    ...Because road topology reflects historical, geographic, and planning decisions, the resulting images serve as both analytical tools and generative art. Developers can integrate it into web pages or interactive dashboards where geographic structure is central, and users can pan/zoom to compare different cities or neighborhoods.
    Downloads: 0 This Week
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  • 4
    ProbabilisticCircuits.jl

    ProbabilisticCircuits.jl

    Probabilistic Circuits from the Juice library

    This module provides a Julia implementation of Probabilistic Circuits (PCs), tools to learn structure and parameters of PCs from data, and tools to do tractable exact inference with them. Probabilistic Circuits provides a unifying framework for several family of tractable probabilistic models. PCs are represented as computational graphs that define a joint probability distribution as recursive mixtures (sum units) and factorizations (product units) of simpler distributions (input units). ...
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  • 5
    Jmol

    Jmol

    An interactive viewer for three-dimensional chemical structures.

    Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...
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    Downloads: 587 This Week
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  • 6

    libsombrero

    Astronomical object/structure detection from 1D and 2D data sets.

    Sombrero is a fast wavelet image processing and object detection C library for astronomical images. Sombrero is named after the "Mexican Hat" shape of the wavelet masks used in image convolution and is released under the GNU LGPL library.
    Downloads: 0 This Week
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  • 7

    GTB: Graphics Toolbox

    C++ libraries and apps for computer graphics and data visualization

    The Graphics Toolbox (GTB) is a collection of C++ libraries and apps for computer graphics and data visualization. Wagner Correa initially created GTB as part of his Ph.D. research at Princeton University in collaboration with Professor Claudio Silva and Dr. James Klosowski. Several other researchers later contributed to GTB (see the AUTHORS file).
    Downloads: 0 This Week
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  • 8
    Scaffold Hunter
    Scaffold Hunter is a JAVA-based software tool for the analysis of structure-related biochemical data. It enables generation of and navigation in a scaffold tree hierarchy annotated with various data.
    Downloads: 0 This Week
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  • 9
    Flux3D.jl

    Flux3D.jl

    3D computer vision library in Julia

    Flux3D.jl is a 3D vision library, written completely in Julia. This package utilizes Flux.jl and Zygote.jl as its building blocks for training 3D vision models and for supporting differentiation. This package also have support of CUDA GPU acceleration with CUDA.jl.
    Downloads: 2 This Week
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  • 10
    pancake

    pancake

    Experimental charting library for Svelte

    ...The project was created for developers who want charts that feel integrated with Svelte components rather than added as a separate heavyweight visualization framework. It supports chart composition through Svelte-style structure, making visual elements easier to reason about inside an application. Pancake is best suited for experiments, prototypes, and Svelte projects that need flexible chart rendering. Its main value is exploring how charting can feel more declarative, responsive, and component-driven in the Svelte ecosystem.
    Downloads: 0 This Week
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  • 11
    Gabedit is a Graphical User Interface for FireFly (PC-Gamess), Gamess-US, Gaussian, Molcas, Molpro, MPQC, NWChem, OpenMopac, Orca, PSI4 and Q-Chem computational chemistry packages.
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    Downloads: 107 This Week
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  • 12
    JuliaFEM.jl

    JuliaFEM.jl

    The JuliaFEM software library is a framework

    The JuliaFEM software library is a framework that allows for the distributed processing of large Finite Element Models across clusters of computers using simple programming models. It is designed to scale up from single servers to thousands of machines, each offering local computation and storage. The JuliaFEM software library is a framework that allows for the distributed processing of large Finite Element Models across clusters of computers using simple programming models. It is designed...
    Downloads: 2 This Week
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  • 13
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
    Downloads: 0 This Week
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  • 14
    Visualization of Protein-Ligand Graphs

    Visualization of Protein-Ligand Graphs

    Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools

    NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
    Downloads: 0 This Week
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  • 15

    Crygr

    Compare and visualize charge densities from various file formats.

    ...Thanks to the cooperation with the author of Jana2006 Vaclav Petricek, the program supports also multipoles obtained by measurements on a diffractometer. With all those file formats available to it, it can compare and visualize the differences between various sources describing the same chemical structure.
    Downloads: 0 This Week
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  • 16

    Py3DN

    Morphometric analysis and visualization of the 3D structure of neurons

    ...The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. Py3DN is described in the paper: Aguiar P et al, "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics, 2013, 11(4):393-403 doi: 10.1007/s12021-013-9188-z
    Downloads: 0 This Week
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  • 17
    NanoCap

    NanoCap

    Carbon Fullerene and Capped Nanotube Generator

    ...The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code.
    Downloads: 0 This Week
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  • 18
    Nuclei

    Nuclei

    Feature rich GUI for nuclear decay schemes

    Nuclei is a software tool for the displaying of nuclear decay schemes and estimated energy spectra, the calculation of angular γ emission anisotropies, and the automated search for appropriate decay cascade properties. It uses the Evaluated Nuclear Structure Data Files (ENSDF). A description of Nuclei's functionality and results obtained using its search method was published in Nuclear Instruments and Methods in Physics Research, Section A: M. Nagl, et al., NIM A 726 (2013), 17-30 [doi:10.1016/j.nima.2013.05.045] ------------------------- © 2012-2013, Matthias Nagl, II. ...
    Downloads: 0 This Week
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  • 19
    Chemitorium
    Free Organic Chemistry Analysis and Visualisation Tool; Chemical formula editor, calculation of threedimensional molecular structures, high-quality realtime rendering, ...
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  • 20
    JTreeMap is a Swing Component which represents a tree structure with rectangles (a TreeMap. See http://www.cs.umd.edu/hcil/treemap/). KTreeMap is the SWT component for treemapping (see http://en.wikipedia.org/wiki/Treemapping). It is an Eclipse plugin.
    Downloads: 1 This Week
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  • 21
    VarPlan is a web application to visualize and manage variants as tree like graph view. The approach is to keep the overview on hundreds of variants with their meta informations.
    Downloads: 0 This Week
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  • 22
    A topological data structure to handle 2D, surfaces and 3D simplicial meshes. This data structure is implemented in C++ using templates. It is based on Corner-Table and CGAL data structure.
    Downloads: 0 This Week
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  • 23
    NOC is a open source development toolkit and a powerful molecular explorer for protein structure visualizing,analysis,crystallographic mapping, modeling, and refinement, Gromacs/Amber MD trajectories displaying,movie making...
    Downloads: 2 This Week
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  • 24
    Finite rotations describe the motions of tectonic plates through geological time ("plate-tectonic reconstructions"). ReconTreeViewer implements a novel visualisation technique to enable visualisation of the temporal structure of a plate-motion model.
    Downloads: 0 This Week
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  • 25
    Structure is a framework for two-dimensional molecular visualization written in Java and based on Octet.
    Downloads: 0 This Week
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