BBMap short read aligner, and other bioinformatic tools.
High-performance read alignment, quantification and mutation discovery
Somatic fusion-genes finder for RNA-seq data
City of Hope CpG Island Analysis Pipeline
Reinforced Recommendation toolkit built around pytorch 1.7
tumor epigenetic database
a A suite designed to study mRNAs, miRNAs and circRNAs
A Web-based genome-wide Position Weight Matrix (PWM) Scanner
An End-to-End Analysis Pipeline for BS-seq
Genobuntu Package for Next Generation Sequencing
Tools for genomic analysis
OLego – short or long RNA-seq read mapping to discover exon junction
Identification of chromatin accessibility from NOMe-seq
Reference-based transcriptome reconstruction software
Bacterial Intergenic Region Analysis Pipeline
Analyze time-course data with significance tests, clustering, modeling
Population simulator to solve next generation sequencing questions
Realistic simulation of RNA-Seq short reads
Tools for mapping RNA-Seq reads to eukaryotic genomes
Identification of transcriptional regulatory modules (TRMs)