Tuque

Tuque includes 4 programs:
tuqueIndex to prepare Bowtie indexes that include spliced sequences
tuqueMap to map reads using the prepared indices
tuqueSplice to find splice junctions from the reads
tuqueCount to count the reads mapping within annotated sequence intervals

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License

BSD License

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Tuque Web Site

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Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Advanced End Users, Science/Research

Programming Language

Python

Related Categories

Python Bio-Informatics Software

Registered

2013-03-25

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