Evidence Directed Gene Construction for Eukaryotes
SSR detection and primer designing software
MANTI - Mastering Advanced N-Termini Interpretation
Bidirectional Functional Enrichment of Gene Expression Data
Various scripts used in sequencing, annotation and RNAseq analysis
Progressive assembly tool using DNA, protein or profile HMMs as seeds.
City of Hope CpG Island Analysis Pipeline
Cis-element prediction tool from microarray data
Metagenome Annotation Pipeline
Viral Genome ORF Reader
Use proTRAC to annotate genomic piRNA clusters
Get specific sequences from a FASTA or FASTQ file.
An End-to-End Analysis Pipeline for BS-seq
Computational Suite For Bioinformaticians and Biologists
Genetic variants discovery tool
Multi-FASTA sequence (DNA or protein) statistics calculator.
Accurately discover viral integration events and fusion transcripts
identification of sequence variant associated with splicing event
Placnet project
MITP - conserve & novel miRNA identification & target prediction tool
An Illumina clone assembly system using SOAPdenovo and ABySS
Handy tools to process/analyze next generation sequencing (NGS) data