Chemical structures database & machine learning with web services API
MiRDeep*
NGSEP (Next Generation Sequencing Experience Platform)
specific protein interaction networks from transcript expression
Post-Transcriptional Exon Shuffling (PTES) Identification Pipeline
differential analysis of combinatorial protein complexes
Hadoop spliced read aligner for RNA-seq data
MapReduce-based tool to remove duplicate DNA reads
miRPlant: An Integrated Tool for Identification of Plant miRNA
detection of rewiring events in protein interaction networks
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller
A spectral method for inferring selection from time series data
Binner for assembled metagenomes
genome assembler finisher, gap, gap close, sort contig
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
DNA/RNA Sequence K-mer Toolkit