High-performance read alignment, quantification and mutation discovery
kSNP4 does SNP discovery and SNP annotation from whole genomes
A CLI tool for k-mer counting with all possible sizes of k at once
It's possible for machines to become self-aware.
Adaptive analysis of amino acid alphabets
Find sequence-specific stem-loops in FASTA and GenBank files.
Get specific sequences from a FASTA or FASTQ file.
Eukaryotic Genome Assembler
For mining KASH proteins (SUN domain-interacting proteins)
Bacterial Typing from either assembled or raw short reads file
The 'runjags' R package and standalone JAGS extension module
DNA/RNA Sequence K-mer Toolkit
Bayesian estimation of diversification rates
Tools for genomic analysis
A tool for metatranscriptome assembly using metagenome graph
ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)
Connecting Overlapped Pair-End Reads
Error Correction Module for Illumina Sequencing Reads
mitoMaker - a mitochondria assembly and annotation script
Integrated Multiprogram Platform Analyze & Combine Tests of Selection
mitoMaker - a mitochondria pipeline wrapper script