Showing 433 open source projects for "prediction"

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  • Red Hat Enterprise Linux on Microsoft Azure Icon
    Red Hat Enterprise Linux on Microsoft Azure

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  • 1
    nmrshiftdb2
    nmrshiftdb2 is a NMR database (web database) for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. The nmrshiftdb2 software is open source, the data is published under an open content license. The core of nmrshitdb2 are fully assigned spectra with raw data and peak lists (we have pure peak lists as well). Those datasets are peer reviewed by a board...
    Downloads: 42 This Week
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  • 2
    Splicing Prediction Pipeline

    Splicing Prediction Pipeline

    Splicing Prediction Pipeline or SPiP

    SPiP is a tool to predict the splice alteration of variant by integrate several prediction tool in a global pipeline. You can also download SPiP in zip format: https://sourceforge.net/projects/splicing-prediction-pipeline/files/SPiP_alone_v2_1.zip For Linux (GitHub): https://github.com/LBGC-CFB/SPiP If you have questions, please contact me to: r.leman@baclesse.unicancer.fr or raphael.leman@orange.fr v2.1 corrected (07/2021) : correction of score calculation v2.1 (06/2021): Most...
    Downloads: 33 This Week
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  • 3

    CPAT

    RNA coding potential assessment tool

    Using RNA-seq, tens of thousands of novel transcripts and isoforms have been identified (Djebali, et al Nature, 2012 , Carbili et al, Gene & Development, 2011) The discovery of these hidden transcriptome rejuvenate the need of distinguishing coding and noncoding RNA. However, Most previous coding potential prediction methods heavily rely on alignment, either pairwise alignment to search for protein evidence or multiple alignments to calculate phylogenetic conservation score (such as CPC...
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    Downloads: 30 This Week
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  • 4
    m2cgen

    m2cgen

    Transform ML models into a native code

    m2cgen (Model 2 Code Generator) - is a lightweight library that provides an easy way to transpile trained statistical models into a native code (Python, C, Java, Go, JavaScript, Visual Basic, C#, PowerShell, R, PHP, Dart, Haskell, Ruby, F#, Rust, Elixir). Transform ML models into a native code (Java, C, Python, Go, JavaScript, Visual Basic, C#, R, PowerShell, PHP, Dart, Haskell, Ruby, F#, Rust) with zero dependencies. Some models force input data to be particular type during prediction phase...
    Downloads: 0 This Week
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    Qrvey saves engineering teams time and money with a turnkey multi-tenant solution connecting your data warehouse to your SaaS application.

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  • 5
    Monitoring AIX, VMware,Oracle, Nutanix

    Monitoring AIX, VMware,Oracle, Nutanix

    AIX, Linux, VMware, Nutanix, Oracle, RHV, Cloud performance monitoring

    The tool offers you end-to-end views of your server environment and can save you significant money in operation monitoring by predicting utilization bottlenecks in your virtualized environment. You can also generate policy-based alerts, capacity reports and load forecasts. The product supports these virtualization platforms: - IBM Power Systems - VMware - Nutanix - Proxmox - Huawei FusionCompute - OracleVM - Oracle Solaris LDOM, CDOM and Global Zone - oVirt / RedHat...
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    Downloads: 26 This Week
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  • 6

    Chatbot Unleashed 0.1.0 Beta

    This is a ChatBot developed with python. Enjoy!

    This ChatBot uses AI to predict what the user is trying to ask/say. It uses predefined responses and is currently unable to generate its own responses until a later date.
    Downloads: 5 This Week
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  • 7
    WxMAP2
    A python-based system to diagnosis and make weather maps (wxmap) of numerical weather prediction models using the Grid Analysis and Display System (GrADS) from opengrads.org
    Downloads: 7 This Week
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  • 8
    SPiCEv2.1

    SPiCEv2.1

    Splicing Prediction in Consensus Element

    SPiCE is no longer maintained. To access the tool's predictions, please use SPiP, accessible at : https://sourceforge.net/projects/splicing-prediction-pipeline/ or https://github.com/raphaelleman/SPiP If you have questions, please contact me to: r.leman@baclesse.unicancer.fr or raphael.leman@orange.fr v2.1.5 (05/2019) + corr (01/2020): Fix bug for linux version v2.1.4 (03/2019): Proxy management (only for Windows version) v2.1.3 (07/2018): correction bug for first 3' ss import vcf...
    Downloads: 3 This Week
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  • 9
    Premium Markets

    Premium Markets

    Premium Markets is an automated financial technical analysis system.

    ... be out of date and in need of compilation. Please contact piggymarketsqueak@googlemail.com for a full update. Full installation instructions can be found at http://www.premiummarkets.uk/html/swtui.html#Download . I would also like to bring to your attention that, in its advanced version, Premium Markets also provides a Forecast machine learning engine based on neural networks. See http://www.premiummarkets.uk/ for documentation and a workable demo of the trend forecast and prediction engine.
    Downloads: 8 This Week
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  • 10

    rafah

    Random Forest Assignment of Hosts

    One fundamental question when trying to describe viruses of Bacteria and Archaea is: Which host do they infect? To tackle this issue we developed a machine-learning approach named Random Forest Assignment of Hosts (RaFAH), which outperformed other methods for virus-host prediction. Our rationale was that the machine could learn the associations between genes and hosts much more efficiently than a human, while also using the information contained in the hypothetical proteins. Random forest...
    Downloads: 3 This Week
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  • 11

    EvidentialGene

    Evidence Directed Gene Construction for Eukaryotes

    EvidentialGene is a genome informatics project, "Evidence Directed Gene Construction for Eukaryotes", to construct high quality, accurate gene sets for animals and plants, developed by Don Gilbert at Indiana University, see http://arthropods.eugenes.org/EvidentialGene/ Construction refers to the combination of classical gene prediction, and more recent gene assembly (de-novo and genome-assisted) methods. The basic Evigene methods involve using available best-of-breed gene prediction...
    Downloads: 3 This Week
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  • 12
    DirectXDiagnostic Tool Opener

    DirectXDiagnostic Tool Opener

    Open DirectXDiagnostic Tool without any commands

    Comprehensive Hardware Analysis, Monitoring and Reporting for Windows. Exhausting information about hardware components displayed in hierarchy unfolding into deep details. Useful for obtaining a detailed hardware inventory report or checking of various hardware-related parameters. Real-time monitoring of a variety of system and hardware parameters covering CPUs, GPUs, mainboards, drives, peripherals, etc. Useful for detection of overheating, overload, performance loss or failure prediction...
    Downloads: 2 This Week
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  • 13
    LifeAI is an artificial intelligence system that can be applied to robotics, games, or business. It simulates key processes of our minds, such as organizing data into concepts and categories, planning actions based on their predicted outcome, and communication. LifeAI was designed to be simple, but powerful and flexible enough to have many applications.
    Downloads: 2 This Week
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  • 14

    PSSPT

    PSSPT (Protein Secondary Structure Prediction Tool)

    PSSPT (Protein Secondary Structure Prediction Tool) Please, visit our GitHub page for more detail.
    Downloads: 0 This Week
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  • 15
    Gemi

    Gemi

    PCR primers / probes design from multiple & degenerate sequences

    ... PCR (qPCR, rt-PCR, etc.), and Sanger sequencing. Gemi can parse large dataset of sequences efficiently. Article: Gemi: PCR primers prediction from multiple alignments Comparative and functional genomics 2012;2012:783138 DOI: https://doi.org/10.1155/2012/783138 PMID: https://www.ncbi.nlm.nih.gov/pubmed/23316117 PMCID: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3535827/
    Downloads: 1 This Week
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  • 16

    CognitioMachina

    Deep learning used to profile program activity

    ... be set up between the profiled program and the deep learning model, facilitating the prediction of program activity based on the real-time function runtimes.
    Downloads: 0 This Week
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  • 17
    miRDeep*

    miRDeep*

    MiRDeep*

    Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction.
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    Downloads: 1 This Week
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  • 18
    ARES

    ARES

    Antibiotic Resistance Evolution Simulator

    ... cells; iv) individual microbiotas where bacterial species coexist; v) hosts containing the microbiotic ensembles; vi) environment(s) where the hosts are contained. Our model facilitates the simultaneous analysis of several features of interest in the prediction of the rules governing the multi-level evolutionary biology of antibiotic resistance, according to a set of pre-established rules. The input of ARES can be prepared with the ARES xml generator server: http://gydb.org/ares.
    Downloads: 0 This Week
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  • 19
    Lhendraw
    Editor for cdx/cdxml files. No structure/name conversion yet, no NMR prediction. Important Info for WINDOWS Users! Saving did never work until 8.8.2023, the error there was stupid, and I found never time to fix it. Now it IS fixed Important Info for MAC Users! lhendraw requires SDL2.0 Framework for mac! It can be obtained here: https://www.libsdl.org/download-2.0.php
    Downloads: 0 This Week
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  • 20
    The Ocean Land Atmosphere Model (OLAM) is a new global general circulation/climate prediction model that will allow to “nest down” to any desired resolution using a flexible mesh refinement technique that works on either triangular or hexagonal g
    Downloads: 0 This Week
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  • 21
    sRNAWorkbench

    sRNAWorkbench

    The UEA sRNA Workbench

    A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data
    Downloads: 1 This Week
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  • 22

    miRPV

    miRPV: An automated pipeline for miRNA Prediction and Validation in si

    miRPV is an Automated tool that allows users to predict and validate microRNA from genome/gene sequence. System Requirement CPU: AMD64 (64bit) Memory: 2Gb RAM Storage: 5Gb Ubuntu 18.04
    Downloads: 0 This Week
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  • 23

    EZStacking

    EZStacking is Jupyter notebook generator for machine learning

    EZStacking is Jupyter notebook generator for supervised learning problems using Scikit-Learn pipelines and stacked generalization. EZStacking handles classification and regression problems for structured data. It can also be viewed as a development tool, because a notebook generated with EZStacking contains: -an exploratory data analysis (EDA) used to assess data quality - a modelling producing a reduced-size stacked estimator - a server returning a prediction, a measure of the quality...
    Downloads: 0 This Week
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  • 24
    Updated 2022-06-11 added option to allow use of atoms other than C-alpha Updated 2021-11-29 to enable compilation on stricter compilers. Ab Initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. Calibur is an efficient tool for finding the decoy with the most number of neighbors within a threshold distance. If you prefer to use GitHub, go to https://github.com/kalngyk/calibur
    Downloads: 0 This Week
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  • 25

    Peptide Pattern Recognition

    Software for non-alignment based analysis of DNA and protein sequences

    Software for analysis, grouping and functional prediction of DNA and protein sequences as described in: Busk P.K. (2017). Peptide Pattern Recognition for high-throughput protein sequence analysis and clustering. BioRxiv. doi: https://doi.org/10.1101/181917. Busk P.K. and Lange L. (2013). Function-based classification of carbohydrate-active enzymes by recognition of short, conserved peptide motifs. Appl Environ Microbiol. 79(11), 3380-91. Busk P.K. Lange M. Pilgaard B. and Lange L. (2014...
    Downloads: 0 This Week
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