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Bioinformatics pipeline for discovery of genetic variants from NGS reads.

Features

  • Support Illumina reads
  • Detect mutations in one exome
  • Detect denovo mutation in one family
  • Detect somatic mutations in tumor/normal pair

Project Samples

Overview of the Scalpel algorithm workflow

Project Activity

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Categories

Bio-Informatics

License

MIT License

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scalpel Web Site

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  • hanfang Posted 2014-03-07
    Great tool.
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Additional Project Details

Operating Systems

Linux, BSD

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl, C++

Related Categories

Perl Bio-Informatics Software, C++ Bio-Informatics Software

Registered

2013-10-24
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