Alternatives to PyMOL

Compare PyMOL alternatives for your business or organization using the curated list below. SourceForge ranks the best alternatives to PyMOL in 2026. Compare features, ratings, user reviews, pricing, and more from PyMOL competitors and alternatives in order to make an informed decision for your business.

  • 1
    Joget DX

    Joget DX

    Joget, Inc.

    Joget offers an open-source, AI-powered platform that converges no-code/low-code development with AI to rapidly build and customize enterprise applications at scale. By combining AI with visual app builders—not raw code—Joget makes app generation faster, safer, and more accessible. With Generative AI and Agentic AI capabilities, Joget Intelligence enables organizations to automate and enhance processes while maintaining oversight and compliance. Unlike typical AI code generation, Joget's visual-first approach ensures applications are maintainable and governed within collaborative human workflows. As an Application and Integration Fabric, Joget connects legacy and modern systems seamlessly. Its extensible, open-source core and plugin architecture offer unmatched flexibility, and its White Label solution allows OEMs and digital solution providers to fully rebrand the platform. Trusted by startups, global enterprises, and government agencies across the globe.
    Starting Price: $5/user/month
  • 2
    SYNTHIA Retrosynthesis Software
    Expert-coded by chemists and engineered by computer scientists, SYNTHIA™ Retrosynthesis Software enables scientists to quickly find and easily navigate innovative and novel pathways for novel and published target molecules. Quickly and efficiently scan hundreds of pathways to help you identify the best option according to your needs. Explore the most cost-effective routes to your target molecules with state of the art visualization and filtering options. Easily customize search parameters to eliminate or promote reactions, reagents or classes of molecules. Explore unique and innovative syntheses that may be unknown for building your desired molecule. Easily generate a list of commercially available starting materials for your synthesis. Benefit from ISO/IEC 27001 Information Security Certification to guarantee the confidentiality, integrity, and protection of your data.
    Starting Price: €0 / 30 days
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    Avogadro

    Avogadro

    Avogadro

    Avogadro is an advanced molecule editor and visualizer designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible high quality rendering and a powerful plugin architecture. Avogadro is a free, open-source molecular editor and visualization tool, designed for use on Mac, Windows, and Linux in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible high quality rendering and a powerful plugin architecture.
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    Ascalaph Designer

    Ascalaph Designer

    Agile Molecule

    Ascalaph Designer is a general-purpose program for molecular dynamic simulations. Under a single graphical environment are represented as their own implementation of molecular dynamics as well as the methods of classical and quantum mechanics of popular programs. Molecular geometry optimization with conjugate gradient methods. Shows molecular models in separate windows. Each window has two cameras, which allow the model to be simultaneously visualized from two sides and in different graphic modes. The subwindow can be opened by dragging the splitter in the right corner of each graphical window. Clicking on an atom or bond with the left mouse button slightly changes their color and a brief info about the picked object appears in the status bar. The wire-frame style is convenient for large molecules, particularly, proteins. Drawing is very fast for this style. Finally, CPK wire frame combines the properties of several above styles.
    Starting Price: Free
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    ArgusLab

    ArgusLab

    ArgusLab

    ArgusLab is a molecular modeling, graphics, and drug design program for Windows operating systems. It’s getting a little dated by now, but remains surprisingly popular. To date, there are more than 20,000 downloads. ArgusLab is freely licensed. You don’t need to sign anything. You can use as many copies as you need if you are teaching a class where your students might benefit from using ArgusLab. You are not allowed to redistribute ArgusLab from other websites or sources. However, you may link to this website from your own websites if you like. A low-key effort is currently underway to port ArgusLab to the iPad. In addition, I’ve done some work with the Qt cross-platform development environment in an effort to support Mac, PC, and Linux.
    Starting Price: Free
  • 6
    Tox Suite

    Tox Suite

    ACD/Labs

    Calculate drug toxicity and safety endpoints to reduce attrition rates of molecular entities that are unlikely to succeed to nomination as a drug candidate, direct new compound synthesis, and focus animal testing requirements.
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    Promethium

    Promethium

    Promethium

    Promethium is a GPU-powered chemistry simulation platform designed to accelerate drug and materials development by enabling faster and more accurate quantum chemistry calculations. Built from the ground up for NVIDIA datacenter GPUs like A100, it employs novel QC Ware streaming algorithms to achieve unprecedented computational speed and high throughput-to-power consumption ratios. It supports density functional theory calculations on systems with up to 2,000 atoms, allowing simulations of large molecular systems that are not feasible with legacy CPU-powered ab initio codes. For instance, a single-point calculation of a 2,056-atom protein can be completed in 14 hours on a single GPU. Promethium offers a range of capabilities, including single-point energy calculations, geometry optimization, conformer search, torsion scan, reaction path optimization, transition state optimization, interaction energy computations, and relaxed potential energy surface scans.
    Starting Price: $30 per hour
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    MoluCAD

    MoluCAD

    New River Kinematics

    MoluCAD is a full-featured molecular modeling and visualization tool designed for Windows. It is the result of a three-year National Institutes of Health biomedical technology research project aimed at producing low-cost educational software for chemistry students. The latest version incorporates many advanced features only found in expensive workstation-based modeling packages. Ease of use, premium graphical quality, and computational robustness are the trademarks of MoluCAD. Novice users are able to quickly generate models, view them form any perspective, create reaction animations, and save all data to disk.
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    MolView

    MolView

    MolView

    MolView is an intuitive, Open-Source web application to make science and education more awesome! MolView is mainly intended as a web-based data visualization platform. You can use MolView to search through different scientific databases including compound databases, protein databases and spectral databases, and view records from these databases as interactive visualizations using WebGL and HTML5 technologies. This web application is built on top of the JavaScript libraries and online services listed below. The Virtual Model Kit has been a source of inspiration for the birth of this project.
    Starting Price: Free
  • 10
    ChemDoodle

    ChemDoodle

    iChemLabs

    ChemDoodle 2D contains thousands of chemistry features, helping you produce the highest quality graphics and saving you hours of work. We spend a very long time scrutinizing the graphics output in ChemDoodle. The software automatically orients bonds in the correct directions, merges bond strokes together, places attributes in the best locations and automatically makes smart decisions that lead to the most beautiful and appealing images. Of course, you can always override the software to your preference. Every component of the graphic is fully customizable. Whether you are looking to control bond widths, arrowhead sizes or shape transparency and color; you are in control. ChemDoodle’s drawing controls are made to clearly model the atoms and bonds they manage. Copious visual feedback is provided. There are also many options for customizing the drawing tools to your preference, including for accessibility concerns.
    Starting Price: $12.5 per month
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    BIOVIA Discovery Studio

    BIOVIA Discovery Studio

    Dassault Systèmes

    Today’s biopharmaceutical industry is marked by complexity: growing market demands for improved specificity and safety, novel treatment classes and more intricate mechanisms of disease. Keeping up with this complexity requires a deeper understanding of therapeutic behavior. Modeling and simulation methods provide a unique means to explore biological and physicochemical processes down to the atomic level. This can guide physical experimentation, accelerating the discovery and development process. BIOVIA Discovery Studio brings together over 30 years of peer-reviewed research and world-class in silico techniques such as molecular mechanics, free energy calculations, biotherapeutics developability and more into a common environment. It provides researchers with a complete toolset to explore the nuances of protein chemistry and catalyze discovery of small and large molecule therapeutics from Target ID to Lead Optimization.
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    Swiss-PdbViewer

    Swiss-PdbViewer

    Swiss-PdbViewer

    Swiss-PdbViewer (aka DeepView) is an application that provides a user-friendly interface allowing to analysis of several proteins at the same time. The proteins can be superimposed in order to deduce structural alignments and compare their active sites or any other relevant parts. Amino acid mutations, H-bonds, angles, and distances between atoms are easy to obtain thanks to the intuitive graphic and menu interface. Swiss-PdbViewer (aka DeepView) has been developed since 1994 by Nicolas Guex. Swiss-PdbViewer was initially tightly linked to SWISS-MODEL, an automated homology modeling server developed within the Swiss Institute of Bioinformatics (SIB) at the Structural Bioinformatics Group at the Biozentrum in Basel. However, the SWISS-MODEL web interface evolved to a point where it is now possible to use it directly for advanced modeling. Maintaining a direct interface with Swiss-PdbViewer is too complex and no longer supported.
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    alvaBuilder

    alvaBuilder

    Alvascience

    alvaBuilder is a no-code de novo molecular design software for generating novel chemical structures that satisfy user-defined structural, physicochemical, and modeling constraints. It enables the creation of new molecules starting from scratch or by evolving existing structures using fragment-based and rule-driven approaches. alvaBuilder integrates seamlessly with QSAR/QSPR workflows, allowing users to guide molecule generation using predictive models, descriptor ranges, and property targets. The software supports medicinal chemistry, lead optimization, and virtual screening tasks by efficiently exploring chemical space while maintaining chemical feasibility and interpretability. alvaBuilder is designed for research and industrial applications where transparent, controllable, and reproducible molecular generation is required.
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    MolPad

    MolPad

    MolPad

    MolPad integrates an interactive chemistry sketcher into any online learning platform. Build open questions about molecular structure and organic chemistry that go beyond just recognizing the right answer. Discover how MolPad can enrich online chemistry education by providing a low code environment for creating dynamic content and smart assessment. With MolPad, we have developed several solutions for interactive and intuitive drawing of structural formulas, enabling the student to practice with topics like chemical naming, functional groups, and Lewis structures in a digital environment. By providing smart feedback based on specific errors, the student can gain more insight than with multiple choice questions.
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    ChemSketch

    ChemSketch

    ACD/Labs

    Comprehensive molecular structure drawing and naming. Draw chemical structures and communicate your science.
  • 16
    HyperProtein

    HyperProtein

    Hypercube

    HyperProtein is Hypercube, Inc.'s new product focusing on the computational science associated with protein sequences. The product includes the analysis of one-dimensional protein sequences as well as the analysis of consequent three-dimensional protein structures. In particular, the relationship between sequence and structure is a fundamental facet of the product. Unlike individual software programs that provide capability for some aspect of protein sequence or structure, such as sequence alignment, HyperProtein puts together a multitude of Bioinformatics and Molecular Modeling tools related to the science that initiates with a protein sequence.
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    alvaModel

    alvaModel

    Alvascience

    alvaModel is a software tool for building, validating, comparing, and applying QSAR and QSPR models. It supports regression and classification workflows based on molecular descriptors and fingerprints, with a strong focus on model transparency, interpretability, and scientific robustness. The software includes multiple data splitting strategies, variable selection methods, modeling algorithms, and comprehensive internal and external validation procedures. alvaModel provides diagnostic plots, applicability domain analysis, and model comparison tools to support the identification of reliable and predictive models. Designed according to best practices in chemometrics, alvaModel facilitates the development of interpretable models consistent with the OECD principles for QSAR validation, making it suitable for research and regulatory-oriented applications. The graphical interface guides users through the entire modeling workflow while allowing full control over each modeling step.
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    BIOVIA

    BIOVIA

    Dassault Systèmes

    BIOVIA solutions create an unmatched scientific management environment that can help science-based organizations create and connect biological, chemical and material innovations to improve the way we live. The industry-leading BIOVIA portfolio is focused on integrating the diversity of science, experimental processes and information requirements end-to-end across research, development, QA/QC and manufacturing. Capabilities over the areas of Scientific Informatics, Molecular Modeling/Simulation, Data Science, Laboratory Informatics, Formulation Design, BioPharma Quality & Compliance and Manufacturing Analytics. BIOVIA is committed to enhancing and speeding innovation, increasing productivity, improving quality and compliance, reducing costs and accelerating product development for customers in multiple industries. Manage and connect scientific innovation processes and information across the product lifecycle.
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    YASARA

    YASARA

    YASARA

    YASARA is a molecular graphics, modeling, and simulation program for Windows, Linux, MacOS, and Android developed in 1993, that finally makes it really easy to answer your questions. With an intuitive user interface, photorealistic graphics, and support for affordable virtual reality headsets, shutter glasses, autostereoscopic displays, and input devices, YASARA creates a new level of interaction with the 'artificial reality', that allows you to focus on your goal and forget about the details of the program. YASARA is powered by PVL (Portable Vector Language), a new development framework that provides performance way above traditional software. PVL allows you to visualize even the largest proteins and enables true interactive real-time simulations with highly accurate force fields on standard PCs, making use of GPUs if available. You can push and pull molecules around and work with dynamic models instead of static pictures.
    Starting Price: Free
  • 20
    Schrödinger

    Schrödinger

    Schrödinger

    Transform drug discovery and materials research with advanced molecular modeling. Our physics-based computational platform integrates differentiated solutions for predictive modeling, data analytics, and collaboration to enable rapid exploration of chemical space. Our platform is deployed by industry leaders worldwide for drug discovery, as well as for materials science in fields as diverse as aerospace, energy, semiconductors, and electronics displays. The platform powers our own drug discovery efforts, from target identification to hit discovery to lead optimization. It also drives our research collaborations to develop novel medicines for critical public health needs. With more than 150 Ph.D. scientists on our team, we invest heavily in R&D. We’ve published over 400 peer-reviewed papers that demonstrate the strength of our physics-based approaches, and we’re continually pushing the limits of computer modeling.
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    OpendTect

    OpendTect

    dGB Earth Sciences

    OpendTect software consists of two parts: a free, open-source part and a commercial, closed-source part that is protected by FlexNet license managing software. The open-source part is OpendTect, a seismic interpretation software system for 2D and 3D seismic data, and for fast-track development of innovative interpretation tools. OpendTect can be extended with free plugins. The closed source part is OpendTect Pro, an extended version with extra functionality for professionals. OpendTect Pro can be further extended with commercial plugins that enable unique seismic interpretation workflows.
  • 22
    Wave Terminal

    Wave Terminal

    Command Line Inc

    Wave is an open-source, AI-native terminal built for seamless developer workflows with inline rendering, a modern UI, and persistent sessions. Features Include: - Render almost anything in line with plugins for images, Markdown, audio/video, and more. - Edit code quickly with the same editor that powers VSCode locally and remotely. - Persistent sessions, searchable universal history, and workspaces across local and remote sessions. - Native AI integration with ChatGPT, with plans to allow users to bring their own AI (BYOLLM) in the future. - Licensed under the Apache 2.0 license, with packages available for both macOS and Linux.
    Starting Price: $0
  • 23
    Extism

    Extism

    Dylibso

    Extism is an open-source, universal plug-in system to make all software programmable, and it's powered by WebAssembly. In-depth documentation, constantly updated as the project grows. 15+ officially supported Host SDKs, making Extism embeddable in the most popular languages. 7+ officially supported PDKs, to write plug-ins in whichever language a developer would like. A growing set of runtime features makes Extism an excellent plug-in system for apps of all types & sizes. Fully-featured canonical reference demo with Elixir host SDK, and plugins in Rust, TypeScript, & Javascript. Implementation of a turn-based multiplayer game platform and games included to play and review. Games are implemented as WebAssembly modules containing a specific set of exports. Check out the source code on GitHub, download the installer, and get started. 100% open-source code. Fork it, experiment, & run your own game server.
    Starting Price: Free
  • 24
    Chemaxon Design Hub
    A platform that connects scientific rationale, compound design, and computational resources. Chemaxon’s Design Hub for medicinal chemistry from analysis to prioritize ideas. Design Compounds and manage ideas within one platform. A single platform that connects scientific rationale, compound design, and computational resources. Switch from PowerPoint files to graphical and chemically searchable hypotheses that are an integral part of the compound design process. Easily work with your trusted phys-chem properties, computational models, novelty issues, or purchasable compound catalogs in a rich visual environment. Involve your CROs in the compound progression process using this secure online service. Analyze collected evidence from biological assays or experimental structural information, extract SAR, and make new hypotheses for the next optimization iteration. Store your scientific hypotheses in a “designer's ELN” (chemically aware drawing canvases).
  • 25
    OpenToonz
    Based on the software "Toonz", developed by Digital Video S.p.A. in Italy, OpenToonz has been customized by Studio Ghibli, and used for the creation of its works for many years. Dwango has launched the OpenToonz project in cooperation with Digital Video and Studio Ghibli. OpenToonz can be used free of charge for both commercial and non-commercial projects. Available as an open-source so that anyone can modify its source code freely. We aim to develop a new platform for connecting the academic research with cutting edge animation production.
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    ChemDraw

    ChemDraw

    PerkinElmer

    Since 1985 ChemDraw® solutions have provided powerful capabilities and integrations to help you quickly turn ideas and drawings into publications you can be proud of. A chemistry communication suite, ChemOffice+ Cloud transforms your chemical drawings into chemical knowledge by facilitating the management, reporting and presenting of your Chemistry research. ChemOffice+ Cloud, is a robust, comprehensive suite, purpose-built to simplify, facilitate, and accelerate chemistry communication. The cloud-native chemistry communication suite builds on the foundations of ChemDraw Professional and adds access to a powerful set of tools to enable scientific research. The mundane task of creating reports to communicate chemical research has become much more efficient with ChemOffice+ Cloud. With powerful capabilities to search, reuse, select, and organize chemical structures and data, chemists can use ChemOffice+ Cloud to create presentation-ready PowerPoint slides and manuscripts.
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    OGRE

    OGRE

    OGRE

    Since 2001, OGRE has grown to become one of the most popular open-source graphics rendering engines, and has been used in a large number of production projects, in such diverse areas as games, simulators, educational software, interactive art, scientific visualisation, and others. OGRE supports Windows (all major versions), Linux, OSX, Android, iOS, Javascript (via EMScripten), Windows Phone (Sponsored by Microsoft) and WinRT. Also, OGRE was ported to PS3 and Xbox360 for several titles. Ogre is released under the MIT License, which is a permissive open source license. The only condition is that you distribute the license text included in our distribution with any software that uses OGRE. Learn OGRE using our series of introducatary Tutorials. Of course the OGRE team provides official documentation in form of the OGRE Manual and API documentation.
  • 28
    Chemaxon Marvin Pro
    Draw and publish chemical structures seamlessly with our web-based chemistry editor. Marvin Pro is a drawing tool that combines our chemically intelligent technology with a clean user interface. Chemists, researchers, and students can convert their thoughts into high-quality visual representations in no time. Marvin Pro handles a large number of objects, chemical structures, arrows, or texts, on a single canvas, and aligns them with precision. Chemical editors shouldn’t be complicated. With our intuitive solution, you can transform your chemical structure ideas into clear visuals. The quality of your chemical drawing should match the effort you put into your research. Marvin Pro allows you to create high-quality visuals that you can then present to your workplace. Let the Marvin Pro canvas become an extension of your mind. Add predefined templates or labels, color your structures, and insert images from external sources. You can even display the structure’s formula.
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    DIA

    DIA

    DIA Association

    DIA (Decentralised Information Asset) is an open-source oracle platform that enables market actors to source, supply and share trustable data. DeFi applications are reliant on trustable and scalable data feeds to build reliable products and avoid exploitation and manipulation. DIA leverages crypto-economic incentives and the wisdom of the community to source, validate and deliver trusted financial data. Bounties for data sourcing and data validation get funded with DIA tokens and are completed for reward. All data is pulled from primary sources to DIA servers. The DIA database gets hashed on-chain, and all scraper code and documentation is hosted on Github. All data is accesible via API endpoints or Oracles. Lending platforms, index providers, prediction markets and other users can freely acces DIA’s open-source, validated data streams.
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    Sonatype Vulnerability Scanner
    Sonatype’s Vulnerability Scanner is a tool designed to help developers identify security risks and compliance issues in their open-source components. It provides users with a comprehensive Software Bill of Materials (SBOM), which lists all open-source dependencies and highlights vulnerabilities and license risks. The platform offers real-time scanning and actionable insights, allowing teams to assess the severity of risks and implement fixes swiftly. With automated scans and detailed reports, Sonatype’s Vulnerability Scanner helps organizations secure their applications, manage third-party dependencies, and maintain compliance across their software environments.
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    Echosec

    Echosec

    Flashpoint

    Anchored by Echosec, Flashpoint’s geospatial Open-Source Intelligence (OSINT) product, the Physical Security Intelligence (PSI) solution offers an extensive range of global open-source data fused with geospatial enrichments, integrated AI, and expert finished intelligence, so practitioners can understand critical events, protect executives, and safeguard physical assets. Accelerate investigations and enhance situational awareness with open-source data, intelligence expertise, analytical tools, and AI enrichments. Effortlessly filter out social media noise to extract meaningful information quickly, monitor the topics and locations that matter to your organization, and alert the right team members when relevant posts are detected.
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    Piskel

    Piskel

    Piskel

    Check a preview of your animation in real time as you draw. Adjust the frame delay on the fly. Several export modes supported. Animated GIFs for sharing, spritesheet PNG/ZIP for bigger projects etc. All the code is open-source and available on GitHub.
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    LottieFiles

    LottieFiles

    LottieFiles

    LottieFiles provides all the tools that you need to create, edit, test and display Lottie animations. Lottie is an open-source animation file format that’s tiny, high quality, interactive, and can be manipulated at runtime. The top 500 apps on the App store now use Lottie to engage users and enhance conversions. Welcome to the largest community of designers and developers using Lottie. An extensive, curated library of free assets awaits you. We have developed simple tools and integrations that require almost no learning curve and make shipping a Lottie fast and seamless. With our drag & drop online editor, you can customize any Lottie animation and download a ready-to-publish file. The LottieFiles plugin for Adobe After Effects lets you go with the flow without leaving the interface, so you can stay in the zone. No matter what platform you’re using, it’s easy to embed animations into your website with just a few clicks.
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    Tiny Tiny RSS

    Tiny Tiny RSS

    Tiny Tiny RSS

    Tiny Tiny RSS is a free and open source web-based news feed (RSS/Atom) reader and aggregator. Free software, licensed under GNU GPLv3; self-hosted: control your own data and protect your privacy instead of relying on third-party services. Supports feed aggregation/syndication, keyboard shortcuts, and OPML import/export. Multiple ways to share stuff: export RSS feeds, plugins for various social sites, sharing by URL, etc. Sharing arbitrary content through tt-RSS. Plugins and themes, embedding full article content via readability and site-specific plugins, deduplication, including perceptual hashing for images, podcasts, flexible article filtering, JSON API, etc.
    Starting Price: Free
  • 35
    Jsuites

    Jsuites

    Jspreadsheet

    A free and open-source collection of lightweight JavaScript plugins, combining several common tools in a single package to facilitate the acceleration of web application development.
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    Redmineflux

    Redmineflux

    Redmineflux

    Redmineflux is a comprehensive project management solution and an extension of the open-source Redmine, which includes over 18 plugins and 2 themes to enhance Redmine's core capabilities.
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    Sonatype Auditor
    Sonatype Auditor is a powerful software tool designed to automate and streamline open-source security and compliance management. It enables organizations to generate a Software Bill of Materials (SBOM) and identify any open-source components in third-party or legacy applications. Auditor scans for security risks, such as vulnerabilities or restricted licenses, and provides real-time alerts for continuous monitoring. With its remediation guidance, users can easily address identified issues and improve their security posture. This tool is ideal for businesses looking to manage open-source components, ensure compliance, and reduce risk across their software environments.
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    Bytesafe

    Bytesafe

    Bitfront

    Increase your open source security posture with automated best practices, with a unified workflow for security and developer teams. The cloud-native security platform reduces risk and protects revenue, without slowing down developers. The dependency firewall quarantines malicious open source before reaching developers and infrastructure, protecting data, assets, and company reputation. Our policy engine evaluates threat signals such as known vulnerabilities, license information, and customer-defined rules. Having insight into what open-source components are used in applications is crucial to avoid exploitable vulnerabilities. Software Composition Analysis (SCA) and dashboard reporting give stakeholders a holistic overview with immediate insights into the current situation. Discover when new open-source licenses are introduced in the codebase. Automatically track license compliance issues and restrict problematic or unlicensed packages.
    Starting Price: €1100 per month
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    ispCP

    ispCP

    ispCP

    ispCP (Internet Service Provider Control Panel) is an open-source project founded to build a multi-server control and administration panel. The ispCP Omega release is completely based on the original open-source VHCS project. All new code, and submissions to ispCP Omega are licensed under the GNU General Public License (V2). Rather than start a project from scratch, the team searched for existing open-source implementations and decided to fork the dying virtual hosting control panel (VHCS) project. This community effort to continue on the work of VHCS lead to the creation of ispCP Omega. The ispCP Omega release is completely based on the original open-source VHCS project. Because part of the ispCP dev team were core members of the dead VHCS project, Malte (ephigenie) and Benedikt (RatS) felt an obligation to offer the desperate community a way to migrate to ispCP. This led to the creation of ispCP Omega, a migration path from VHCS to ispCP.
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    GeoPandas

    GeoPandas

    GeoPandas

    GeoPandas is an open-source project to make working with geospatial data in python easier. GeoPandas extends the datatypes used by pandas to allow spatial operations on geometric types. Geometric operations are performed by shapely. Geopandas further depends on fiona for file access and matplotlib for plotting. The goal of GeoPandas is to make working with geospatial data in python easier. It combines the capabilities of pandas and shapely, providing geospatial operations in pandas and a high-level interface to multiple geometries to shapely. GeoPandas enables you to easily do operations in python that would otherwise require a spatial database such as PostGIS. GeoPandas is a community-led project written, used and supported by a wide range of people from all around of world of a large variety of backgrounds. GeoPandas will always be 100% open source software, free for all to use and released under the liberal terms of the BSD-3-Clause license.
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    SurveyJS

    SurveyJS

    SurveyJS

    SurveyJS is a product family of four open-source JavaScript libraries that provide you with all the advantages of a custom-built in-house survey application while significantly reducing time-to-market and resources required to get the system up and running. The libraries are compatible with most popular JavaScript frameworks and can communicate with any server that can post and get a request in JSON format, which makes them server- and database-agnostic. The product family is composed of: > An open-source MIT-licensed rendering library that renders dynamic JSON-based forms in your web application, and collects responses. > An self-hosted drag-and-drop form builder that features an integrated CSS-based theme editor and a GUI for conditional rules. > PDF Generator, a library that renders SurveyJS surveys and forms as PDF files in a browser. > The Dashboard library that allows you to simplify survey data analysis with interactive and customizable charts and tables.
    Starting Price: 499/once
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    ChemOffice

    ChemOffice

    PerkinElmer Informatics

    ChemOffice enhances scientists’ personal productivity and helps them do better science by enabling them to organize and explore their compounds, reactions and associated properties so that data can be turned into actionable information, and decisions can be made with greater confidence. ChemDraw for Excel adds chemical intelligence to Excel spreadsheets so that chemists can use Excel’s analysis, sorting and organization tools to further manipulate and enrich sets of compounds and data and explore structure-activity relationships. Chem3D generates 3D models so that chemists can view their compounds in three dimensions to assess shape and properties to maximize activity or specificity. ChemFinder is a chemically-intelligent personal database system that scientists use to organize their compounds and to search for and correlate structures with properties.
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    Chemical Computing Group

    Chemical Computing Group

    Chemical Computing Group

    Chemical Computing Group (CCG) has a strong reputation for collaborative scientific support. With offices in North America, Europe and Asia, our team of PhD-level scientists works closely with our clients, providing support, hands-on training and scientific advice on a wide range of projects. CCG continuously develops new technologies with its team of mathematicians, scientists and software engineers and through scientific collaborations with customers.
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    Evo 2

    Evo 2

    Arc Institute

    Evo 2 is a genomic foundation model capable of generalist prediction and design tasks across DNA, RNA, and proteins. It utilizes a frontier deep learning architecture to model biological sequences at single-nucleotide resolution, achieving near-linear scaling of compute and memory relative to context length. Trained with 40 billion parameters and a 1 megabase context length, Evo 2 processes over 9 trillion nucleotides from diverse eukaryotic and prokaryotic genomes. This extensive training enables Evo 2 to perform zero-shot function prediction across multiple biological modalities, including DNA, RNA, and proteins, and to generate novel sequences with plausible genomic architecture. The model's capabilities have been demonstrated in tasks such as designing functional CRISPR systems and predicting disease-causing mutations in human genes. Evo 2 is publicly accessible via Arc's GitHub repository and is integrated into the NVIDIA BioNeMo framework.
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    Evo Designer

    Evo Designer

    Arc Institute

    Evo Designer is an advanced tool developed by the Arc Institute, leveraging the capabilities of the Evo 2 genomic foundation model to facilitate DNA sequence generation and analysis. This platform enables users to input nucleotide sequences or specify organisms, prompting the model to generate corresponding DNA sequences. It provides comprehensive annotations of coding regions and, for prokaryotic sequences, offers 3D protein visualizations utilizing ESMFold. Additionally, Evo Designer evaluates sequences by scoring their perplexity and per-nucleotide entropy, assisting researchers in assessing sequence complexity and variability. The underlying Evo 2 model is trained on over 9 trillion nucleotides from a diverse array of prokaryotic and eukaryotic genomes, employing a deep learning architecture that models biological sequences at single-nucleotide resolution with a context window extending up to 1 million tokens.
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    Structure Elucidator
    Elucidate complex structures from experimental data with the help of expert algorithms.
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    StarDrop

    StarDrop

    Optibrium

    With its comprehensive suite of integrated software, StarDrop™ delivers best-in-class in silico technologies within a highly visual and user-friendly interface. StarDrop™ enables a seamless flow from the latest data through predictive modeling to decision-making regarding the next round of synthesis and research, improving the speed, efficiency, and productivity of the discovery process. Successful compounds require a balance of many different properties. StarDrop™ guides you through this multi-parameter optimization challenge to target compounds with the best chance of success, saving you time and resources by enabling you to synthesize and test fewer compounds.
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    Nygen

    Nygen

    Nygen

    Nygen is a cloud-based single-cell RNA-seq (scRNA-seq) and multi-omics data analysis and discovery platform designed to let researchers upload, explore, visualize, analyze and interpret complex cellular datasets with an intuitive, no-code interface that supports drag-and-drop workflows and advanced scientific analysis without requiring programming expertise; it combines Nygen Analytics for rapid, reproducible scRNA-seq exploration with collaborative dashboards and publication-ready outputs, Nygen Database for accessing and hosting curated single-cell datasets to accelerate research and comparative studies, and Nygen Insights, an AI-augmented tool that delivers highly accurate cell annotations, in-depth disease impact analysis and tailored biological insights; it supports a wide range of data formats, integrates public data, enables secure cloud-based collaboration, and provides features like literature-linked evidence and biomarker-focused analyses.
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    3Delight

    3Delight

    Illumination Research

    Introducing 3Delight refreshingly simple and fast. High performance production rendering software & tools with unmatched support services. Illumination Research, headquartered in Singapore, specialises in rendering solutions for the demanding environment of the VFX and animation production pipeline. 3Delight was first introduced in 2002 and has since been used in countless feature films and commercials. Our product line include 3DelightNSI, 3Delight for Maya and 3Delight for Katana. We are also in the testing phase for a rendering service through 3Delight Cloud. 3Delight for Maya is our proprietary rendering plug-in for Autodesk® Maya®. It is easy to use by the artists, while providing all the flexibility to support the most demanding rendering pipelines. The free 3Delight comes with one full license with all the features but with a restriction to use a maximum of 12 cores for rendering on your computer.
    Starting Price: $30 per week
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    AniSora

    AniSora

    Bilibili

    AniSora is an advanced open-source AI-powered anime video generation model developed by Bilibili, a leading Chinese video sharing platform known for its focus on anime and related content. It is part of Bilibili’s Project Index-AniSora and represents a significant technological breakthrough in the field of AI-driven animation. AniSora specializes in transforming still images into high-quality, dynamic anime-style videos with superior motion control, style consistency, and expressive character animation. The model is trained on over 10 million high-quality data samples, enabling it to capture the unique visual nuances of anime, manga, and Chinese original animations.
    Starting Price: $0