NAMD

NAMD

Theoretical and Computational Biophysics Group
NAMD SnapGene

Related Products

  • IONOS Cloud GPU Servers
    4.6 out of 5 stars 45,816 Ratings
    Visit Website for IONOS Cloud GPU Servers
  • Innoslate
    4.5 out of 5 stars 99 Ratings
    Visit Website for Innoslate
  • CompUp
    4.9 out of 5 stars 66 Ratings
    Visit Website for CompUp
  • SMS Storetraffic
    4.8 out of 5 stars 132 Ratings
    Visit Website for SMS Storetraffic
  • NINJIO
    4.8 out of 5 stars 416 Ratings
    Visit Website for NINJIO
  • Codemagic
    4.7 out of 5 stars 138 Ratings
    Visit Website for Codemagic
  • LTX
    4.4 out of 5 stars 182 Ratings
    Visit Website for LTX
  • Azore CFD
    4.3 out of 5 stars 26 Ratings
    Visit Website for Azore CFD
  • CHARMS
    4.9 out of 5 stars 24 Ratings
    Visit Website for CHARMS
  • Canditech
    5.0 out of 5 stars 111 Ratings
    Visit Website for Canditech
NAMD:

About

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. Based on Charm++ parallel objects, it scales from desktop and laptop computers to high-end parallel platforms, hundreds of cores for typical simulations, and beyond 500,000 cores for the largest simulations. NAMD is built for researchers who need to simulate large molecular systems efficiently while preserving compatibility with widely used molecular modeling workflows. It uses the popular molecular graphics program VMD for simulation setup and trajectory analysis, and it is file-compatible with AMBER, CHARMM, and X-PLOR. It is designed to support biomolecular simulations involving proteins, membranes, nucleic acids, solvents, ions, and other molecular systems where atomic interactions and time-dependent motion need to be studied in detail.
SnapGene:

About

Accurately design and simulate cloning procedures. Test complicated projects, catch errors before they happen, and obtain the right constructs the first time. Cloning is easier when you can see what you are doing. The intuitive interface offers you unparalleled visibility into your work, simplifying often complex tasks. SnapGene automates documentation, so you don’t have to. See and share every sequence edit and cloning procedure that led to your final plasmid. Improve your core molecular biology procedures, and improve your results. Master SnapGene and key concepts in cloning with our new online learning center, SnapGene Academy. Containing over 50 video tutorials taught by scientific experts, SnapGene Academy helps you advance your skills across multiple molecular biology courses. SnapGene 7.2 provides a new visualization of primer homodimer structures and enhancements to file management, allowing tabs to be organized in multiple windows using drag and drop.
NAMD:

Platforms Supported

Windows Supported
Mac Supported
Linux Supported
Cloud Not Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
SnapGene:

Platforms Supported

Windows Not Supported
Mac Not Supported
Linux Not Supported
Cloud Supported
On-Premises Not Supported
iPhone Not Supported
iPad Not Supported
Android Not Supported
Chromebook Not Supported
NAMD:

Audience

Biophysicists, biologists, and simulation researchers requiring a biomolecular simulation tool for desktops, clusters, GPUs, and supercomputers
SnapGene:

Audience

Labs and researchers in need of a solution to improve their core molecular biology procedures
NAMD:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported
SnapGene:

Support

Phone Support Not Supported
24/7 Live Support Not Supported
Online Supported
NAMD:

API

Offers API Not Supported
SnapGene:

API

Offers API Not Supported
NAMD:

Screenshots and Videos

SnapGene:

Screenshots and Videos

NAMD:

Pricing

Free
Free Version Supported
Free Trial Not Supported
SnapGene:

Pricing

$295 per year
Free Version Not Supported
Free Trial Supported
NAMD:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
SnapGene:

Reviews/Ratings

Overall 0.0 / 5
ease 0.0 / 5
features 0.0 / 5
design 0.0 / 5
support 0.0 / 5

This software hasn't been reviewed yet. Be the first to provide a review:

Review this Software
NAMD:

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
SnapGene:

Training

Documentation Supported
Webinars Not Supported
Live Online Not Supported
In Person Not Supported
NAMD:

Company Information

Theoretical and Computational Biophysics Group
Founded: 2006
United States
www.ks.uiuc.edu/Research//namd/
SnapGene:

Company Information

SnapGene
United States
www.snapgene.com
NAMD:

Alternatives

SnapGene:

Alternatives

NAMD:
SnapGene:
Photo51

Photo51

Fearless League
NAMD:
SnapGene:
AlphaGenome 2

AlphaGenome 2

Google DeepMind
NAMD:
Ascalaph Designer

Ascalaph Designer

Agile Molecule
SnapGene:
NAMD:
SnapGene:
AlphaGenome

AlphaGenome

Google DeepMind
NAMD:

Categories

SnapGene:

Categories

NAMD:

Integrations

Conspecta Not Supported
SnapGene:

Integrations

Conspecta Supported
NAMD:
Claim NAMD and update features and information
Claim NAMD and update features and information
SnapGene:
Claim SnapGene and update features and information
Claim SnapGene and update features and information