CufflinksCole Trapnell
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Folklore Clinical Variant InterpretationHelena Bioinformatics
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Related Products
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About
Cufflinks assemble transcripts, estimate their abundances and test for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one, taking into account biases in library preparation protocols. Cufflinks was originally developed as part of a collaborative effort between the Laboratory for Mathematical and Computational Biology. In order to make it easy to install Cufflinks, we provide a few binary packages to save users from the occasionally frustrating process of building Cufflinks, which requires that you install the libraries. Cufflinks includes a number of tools for analyzing RNA-Seq experiments. Some of these tools can be run on their own, while others are pieces of a larger workflow.
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About
Folklore is Helena Bioinformatics' research-use-only platform for clinical variant interpretation. It helps genomic professionals examine public variant evidence, literature, clinical assertions, population information and guideline-relevant evidence in a structured workflow. Folklore also provides a public read-only MCP adapter for agent-based evidence discovery. It does not diagnose, recommend treatment or replace expert review. The platform is intended for clinical genomics teams, molecular diagnostics laboratories, researchers, bioinformaticians and variant scientists.
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Platforms Supported
Windows
Mac
Linux
Cloud
On-Premises
iPhone
iPad
Android
Chromebook
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Platforms Supported
Windows
Mac
Linux
Cloud
On-Premises
iPhone
iPad
Android
Chromebook
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Audience
Scientists requiring a solution to analyze their RNA-Seq samples
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Audience
Clinical genomics teams, molecular diagnostics laboratories, variant scientists, bioinformaticians, researchers and academic or healthcare organizations evaluating public genomic evidence.
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Support
Phone Support
24/7 Live Support
Online
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Support
Phone Support
24/7 Live Support
Online
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API
Offers API
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API
Offers API
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Screenshots and Videos |
Screenshots and VideosNo images available
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Pricing
Free
Free Version
Free Trial
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Pricing
No information available.
Free Version
Free Trial
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Reviews/
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Reviews/
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Training
Documentation
Webinars
Live Online
In Person
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Training
Documentation
Webinars
Live Online
In Person
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Company InformationCole Trapnell
Founded: 2017
United States
cole-trapnell-lab.github.io/cufflinks/
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Company InformationHelena Bioinformatics
Bulgaria
folklore.helena.bio
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Integrations
No info available.
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Integrations
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