Correlation EngineIllumina
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CufflinksCole Trapnell
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Related Products
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About
Correlation Engine is an interactive omics knowledgebase that puts private omics data in a biological context with highly curated public data. One of the largest biological databases in the world, Correlation Engine provides life science researchers with unprecedented access to vast numbers of high-quality whole-genome analyses and insightful scientific tools. The knowledgebase enables novel discoveries by interrogating billions of data points derived from standardized analyses of whole genome studies. A suite of applications to determine biological context, a continually growing library of curated data sets, and support for multiple species and multi-omic datasets. Utilize a simple graphical user interface to leverage guided workflows, push-button applications, and APIs. Accelerate your journey from omic data to decision and get access to over 25,000 multi-omics studies (from over 250,000 signatures) that have been reanalyzed.
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About
Cufflinks assemble transcripts, estimate their abundances and test for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one, taking into account biases in library preparation protocols. Cufflinks was originally developed as part of a collaborative effort between the Laboratory for Mathematical and Computational Biology. In order to make it easy to install Cufflinks, we provide a few binary packages to save users from the occasionally frustrating process of building Cufflinks, which requires that you install the libraries. Cufflinks includes a number of tools for analyzing RNA-Seq experiments. Some of these tools can be run on their own, while others are pieces of a larger workflow.
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Platforms Supported
Windows
Not Supported
Mac
Not Supported
Linux
Not Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
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Android
Not Supported
Chromebook
Not Supported
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Platforms Supported
Windows
Supported
Mac
Supported
Linux
Supported
Cloud
Not Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Audience
Life science researchers looking for a solution to get access to genome analysis and insightful scientific tools
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Audience
Scientists requiring a solution to analyze their RNA-Seq samples
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Support
Phone Support
Supported
24/7 Live Support
Not Supported
Online
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Support
Phone Support
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24/7 Live Support
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Online
Supported
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API
Offers API
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API
Offers API
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Screenshots and Videos |
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Pricing
No information available.
Free Version
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Free Trial
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Pricing
Free
Free Version
Supported
Free Trial
Not Supported
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Reviews/
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Reviews/
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Training
Documentation
Supported
Webinars
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Live Online
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In Person
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Training
Documentation
Supported
Webinars
Not Supported
Live Online
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In Person
Not Supported
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Company InformationIllumina
United States
www.illumina.com/products/by-type/informatics-products/basespace-correlation-engine.html
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Company InformationCole Trapnell
Founded: 2017
United States
cole-trapnell-lab.github.io/cufflinks/
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Categories |
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Integrations
Illumina DRAGEN Secondary Analysis
Not Supported
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