AlphaGenome 2Google DeepMind
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CufflinksCole Trapnell
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Related Products
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AlphaGenome 2:
About
AlphaGenome 2 is an AI model and research software for analyzing how DNA sequence influences gene regulation and related molecular processes. It takes DNA sequence as input and predicts molecular properties, helping researchers investigate regulatory activity, gene expression, splicing, chromatin accessibility, and other genomic signals. It is designed for scientists studying gene function, genetic variant effects, and disease biology, including academic and other noncommercial research users. The model is available through an online API and developer tools for submitting sequences and retrieving predictions for computational analysis. Researchers can use predictions to prioritize hypotheses and inform follow-up experiments. AlphaGenome 2 is intended for research use only and has not been validated or approved for clinical or diagnostic purposes.
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Cufflinks:
About
Cufflinks assemble transcripts, estimate their abundances and test for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one, taking into account biases in library preparation protocols. Cufflinks was originally developed as part of a collaborative effort between the Laboratory for Mathematical and Computational Biology. In order to make it easy to install Cufflinks, we provide a few binary packages to save users from the occasionally frustrating process of building Cufflinks, which requires that you install the libraries. Cufflinks includes a number of tools for analyzing RNA-Seq experiments. Some of these tools can be run on their own, while others are pieces of a larger workflow.
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AlphaGenome 2:
Platforms Supported
Windows
Not Supported
Mac
Not Supported
Linux
Not Supported
Cloud
Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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Cufflinks:
Platforms Supported
Windows
Supported
Mac
Supported
Linux
Supported
Cloud
Not Supported
On-Premises
Not Supported
iPhone
Not Supported
iPad
Not Supported
Android
Not Supported
Chromebook
Not Supported
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AlphaGenome 2:
Audience
Researchers and computational biologists studying gene regulation, genetic variants, and disease biology; the noncommercial access is aimed at research use.
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Cufflinks:
Audience
Scientists requiring a solution to analyze their RNA-Seq samples
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AlphaGenome 2:
Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Not Supported
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Cufflinks:
Support
Phone Support
Not Supported
24/7 Live Support
Not Supported
Online
Supported
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AlphaGenome 2:
API
Offers API
Supported
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Cufflinks:
API
Offers API
Not Supported
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AlphaGenome 2:
Screenshots and VideosNo images available
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Cufflinks:
Screenshots and Videos |
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AlphaGenome 2:
PricingThe AlphaGenome API is free of charge for noncommercial use. Commercial research access is in private preview.
Free Version
Supported
Free Trial
Not Supported
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Cufflinks:
Pricing
Free
Free Version
Supported
Free Trial
Not Supported
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AlphaGenome 2:
Reviews/
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Cufflinks:
Reviews/
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AlphaGenome 2:
Training
Documentation
Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Not Supported
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Cufflinks:
Training
Documentation
Supported
Webinars
Not Supported
Live Online
Not Supported
In Person
Not Supported
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AlphaGenome 2:
Company InformationGoogle DeepMind
Founded: 2010
United Kingdom
deepmind.google/science/alphagenome/
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Cufflinks:
Company InformationCole Trapnell
Founded: 2017
United States
cole-trapnell-lab.github.io/cufflinks/
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AlphaGenome 2:
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Cufflinks:
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AlphaGenome 2:
Categories |
Cufflinks:
Categories |
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AlphaGenome 2:
Integrations
No info available.
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Cufflinks:
Integrations
No info available.
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AlphaGenome 2:
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Cufflinks:
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