Telomerecat: The Telomere Computatioanl Analysis Tool
Telomerecat allows you to generate average TL estimates for any high throughput paired end sequencing samples.
Features
- Estimate TL estimates for any paired end sequencing data
- Adjusts for anneuploidy, commonly seen in cancer samples, without need for ploidy estimates
- Filter out interstitial telomeric repeats without bias from previous alignment or mapping
- Runs in around an hour for a BAM file of ~100GB
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