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TASSEL is a bioinformatics software package that can analyze diversity for sequences, SNPs, or SSRs. Genotype/phenotype associations can be carried out by GLM or a mixed model. Estimates distance and linkage disequilibrium statistics.

Features

  • Association Mapping by Mixed Model
  • Association Mapping by GLM
  • Linkage disequilibrium estimates
  • Q-Q plots and Manhatten plots

Project Samples

Linkage Disequilbrium Display MLM Analysis Alignment Viewer

Project Activity

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Categories

Bio-Informatics

License

GNU Library or Lesser General Public License version 2.0 (LGPLv2)

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TASSEL Web Site

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  • heathersimmons Posted 2013-06-19
    Thanks for Tassel, it's great!
    1 user found this review helpful.
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Additional Project Details

Languages

English

Intended Audience

Science/Research, Education

User Interface

Java Swing

Programming Language

Java

Related Categories

Java Bio-Informatics Software

Registered

2005-03-04
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