The SNP ratio test can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses. See link below for more.

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Overview of the SRT Example of non-significant and significant pathways.

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Categories

Simulation, Bio-Informatics, Mathematics

License

GNU General Public License version 2.0 (GPLv2)

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  • ivanhutchins Posted 2013-06-26
    Snpratiotest is wonderful! Thanks.
    1 user found this review helpful.
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Additional Project Details

Operating Systems

Linux, Windows

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl

Related Categories

Perl Simulation Software, Perl Bio-Informatics Software, Perl Mathematics Software

Registered

2008-12-12
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