The SNP ratio test can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses. See link below for more.

Project Samples

Overview of the SRT Example of non-significant and significant pathways.

Project Activity

See All Activity >

Categories

Simulation, Bio-Informatics, Mathematics

License

GNU General Public License version 2.0 (GPLv2)

Follow SNP ratio test

SNP ratio test Web Site

Other Useful Business Software
Cut Data Warehouse Costs by 54% Icon
Cut Data Warehouse Costs by 54%

Easily migrate from Snowflake, Redshift, or Databricks with free tools.

BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
Start Free
Rate This Project
Login To Rate This Project

User Ratings

5.0 out of 5 stars
★★★★★
★★★★
★★★
★★
★
1
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

User Reviews

Filter Reviews:
All
  • ivanhutchins Posted 2013-06-26
    Snpratiotest is wonderful! Thanks.
    1 user found this review helpful.
Read more reviews >

Additional Project Details

Operating Systems

Linux, Windows

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl

Related Categories

Perl Simulation Software, Perl Bio-Informatics Software, Perl Mathematics Software

Registered

2008-12-12
Report inappropriate content