PipeDream is a *nix processing pipeline for analysis of large single or multi-modality neuro-imaging data sets.

PipeDream is no longer being updated in this repository. Code will remain here as an archive of processing methods that were applied to published data using PipeDream.

If you are looking for data organization and pre-processing code, please see the new version of PipeDream on GitHub:

https://github.com/cookpa/pipedream

It is still very much a work in progress but has dicom2series, dicom2nii, nii2dt.

If you are looking for a T1 processing pipeline, please see antsCorticalThickness.sh in the latest version of ANTs:

https://github.com/stnava/ANTs

The old PipeDream "antsbrainprocessing.sh" was a protoyype for antsCorticalThickness.sh.

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License

BSD License

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Additional Project Details

Intended Audience

Science/Research

User Interface

Command-line

Registered

2009-02-23