CViT - Chromosome Viewing Tool. A collection of Perl scripts that enable quick visualizations of features on linkage groups, psuedochromosomes or cytogenetic maps. Intended for whole-genome views of data but can be used to create images of single chromosomes/linkage groups, contigs, or BACs, or even proteins -- any feature that has a location on a backbone. Handles most standard genetic/genomic coordinate systems. Reads GFF3 data and produces a PNG or SVG image.

Project Samples

Gene models for maize genome assembly B73 RefGen_v2 BACs, hit densities, CGH, cytogenetic markers

Project Activity

See All Activity >

Categories

Bio-Informatics, Data Visualization

Follow CViT

CViT Web Site

Other Useful Business Software
Auth0 B2B Essentials: SSO, MFA, and RBAC Built In Icon
Auth0 B2B Essentials: SSO, MFA, and RBAC Built In

Unlimited organizations, 3 enterprise SSO connections, role-based access control, and pro MFA included. Dev and prod tenants out of the box.

Auth0's B2B Essentials plan gives you everything you need to ship secure multi-tenant apps. Unlimited orgs, enterprise SSO, RBAC, audit log streaming, and higher auth and API limits included. Add on M2M tokens, enterprise MFA, or additional SSO connections as you scale.
Sign Up Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of CViT!

Additional Project Details

Intended Audience

Developers, Science/Research

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software, Perl Data Visualization Software

Registered

2010-10-20
Report inappropriate content