ChIPOTle 2.0 is a user friendly tool for performing peak detection in ChIP-chip signal. The tool also has functions for probe sorting, signal normalization, replication merging, and multiple correction testing in a windows interface or *nix command line.
License
GNU General Public License version 2.0 (GPLv2)Follow ChIPOTle 2.0 Peak Discrimination Tool
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Thanks for Chipotle-2, it's wonderful!