DownloadThe Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
Features
- Database Search Engines (comet etc.)
- SpecraST (Spectrum Library Search Engine)
- Open-mass Search (Magnum etc.)
- Kojak (Crosslinking Search)
- DDA Analysis
- DISCo (DIA Analysis)
- reSpect (Chimeric Spectrum Analysis)
- MS1 and MS2 Quantitation Labelled and Unlabelled
- Decoy Database Generation
- PeptideProphet (PSM Level Validation)
- iProphet (Peptide Level Validation)
- PTMProphet (Post-Translational Modification Validation)
- Protein Level Validation
- Spectrum Library Generation
- Data Visualization Tools
- Retention Time Cataloging and Prediction
Project Samples
License
GNU Library or Lesser General Public License version 2.0 (LGPLv2), GNU General Public License version 2.0 (GPLv2)Follow SASHIMI
You Might Also Like
As your users rely more and more on Cloud and Internet-based technologies, reliable internet connectivity becomes more and more important to your business. With Bigleaf’s proven SD-WAN architecture, groundbreaking AI, and DDoS attack mitigation, you can finally deliver the reliable internet connectivity your business needs without the limitations of traditional networking platforms. Bigleaf’s Cloud Access Network and plug-and-play router allow for limitless control to and from anywhere your traffic needs to go. Bigleaf’s self-driving AI automatically identifies and adapts to any changing circuit conditions and traffic needs—addressing issues before they impact your users. Bigleaf puts you in the driver’s seat of every complaint and support call with full-path traffic and network performance data, delivered as actionable insights, reports, and alerts.