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[Sashimi-commit] SF.net SVN: sashimi:[5804] branches/4-6/trans_proteomic_pipeline
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From: <sla...@us...> - 2012-04-20 22:41:38
|
Revision: 5804
http://sashimi.svn.sourceforge.net/sashimi/?rev=5804&view=rev
Author: slagelwa
Date: 2012-04-20 22:41:21 +0000 (Fri, 20 Apr 2012)
Log Message:
-----------
* Fixed the patching of hdf5
* Set the version/build
Modified Paths:
--------------
branches/4-6/trans_proteomic_pipeline/extern/hdf5-1.8.6.mingwpatch
branches/4-6/trans_proteomic_pipeline/src/Makefile.incl
branches/4-6/trans_proteomic_pipeline/src/common/TPPVersion.h
Modified: branches/4-6/trans_proteomic_pipeline/extern/hdf5-1.8.6.mingwpatch
===================================================================
--- branches/4-6/trans_proteomic_pipeline/extern/hdf5-1.8.6.mingwpatch 2012-04-19 21:57:34 UTC (rev 5803)
+++ branches/4-6/trans_proteomic_pipeline/extern/hdf5-1.8.6.mingwpatch 2012-04-20 22:41:21 UTC (rev 5804)
@@ -1,1771754 +1,165 @@
-diff -rupN hdf5-1.8.6/ACKNOWLEDGMENTS hdf5-1.8.6.patched/ACKNOWLEDGMENTS
---- hdf5-1.8.6/ACKNOWLEDGMENTS 1969-12-31 16:00:00.000000000 -0800
-+++ hdf5-1.8.6.patched/ACKNOWLEDGMENTS 2011-02-14 08:23:44.000000000 -0800
-@@ -0,0 +1,18 @@
-+Acknowledgments - November 2010
-+-------------------------------
-+
-+We would like to thank the following people who have contributed directly
-+or indirectly to HDF5:
-+
-+Werner Benger, for contributing code used to add support for the Windows
-+Threading library included in the 1.8.6 release.
-+
-+John A. Biddiscombe, Mike Jackson, and Sean McBride for contributing and
-+testing CMake code included in the HDF5 1.8.5 distribution.
-+
-+The HDF5 community for helping shape the development of HDF5 by contributing
-+bug reports and patches, joining in on forum discussions, and continually
-+supporting our software.
-+
-+Finally, we'd like to thank all organizations whose funding has made HDF5
-+possible.
-diff -rupN hdf5-1.8.6/CMakeLists.txt hdf5-1.8.6.patched/CMakeLists.txt
---- hdf5-1.8.6/CMakeLists.txt 1969-12-31 16:00:00.000000000 -0800
-+++ hdf5-1.8.6.patched/CMakeLists.txt 2011-02-14 08:23:44.000000000 -0800
-@@ -0,0 +1,893 @@
-+cmake_minimum_required (VERSION 2.8)
-+PROJECT (HDF5 C CXX)
-+
-+#-----------------------------------------------------------------------------
-+# Instructions for use : Normal Build
-+#
-+# For standard build of HDF5 libraries,tests and tools.
-+# Run cmake using the HDF5 source tree to generate a build tree.
-+# Enable/Disable options according to requirements and
-+# set CMAKE_INSTALL_PREFIX to the required install path.
-+# Make install can be used to install all components for system-wide use.
-+#
-+#-----------------------------------------------------------------------------
-+# Instructions for use : Sub-Project Build
-+#
-+# To include HDF5 as a sub-project within another project.
-+# Set HDF5_EXTERNALLY_CONFIGURED to 1 in the parent project and
-+# supply values for the following variables...
-+#
-+# HDF5_EXPORTED_TARGETS :
-+# Set this to the name of the targets variable which controls exports
-+# If unset (because parent project does not support/use the
-+# INSTALL (EXPORT target...) syntax), then targets are not configured
-+# for export during install.
-+#
-+# HDF5_LIB_DEPENDENCIES :
-+# If the build of HDF5 libs is being customized, then rules for the
-+# dependencies of the HDF5 libs may be 'incomplete', add additional
-+# dependencies to this variable so that external projects pick them up
-+#
-+# HDF5_EXTERNAL_LIB_PREFIX :
-+# If the parent project needs to install hdf libraries, but avoid
-+# name conflicts with system versions, then a prefix may be added
-+# to ensure that the correct versions configured are used.
-+#
-+# HDF5_INSTALL_BIN_DIR, HDF5_INSTALL_LIB_DIR, HDF5_INSTALL_INCLUDE_DIR :
-+# Customize the 'bin', 'lib', and 'include' installation directories.
-+#
-+# HDF5_INSTALL_NO_DEVELOPMENT :
-+# Set to true to skip installation of headers and CMake package files.
-+#
-+# Consider this example from the ParaView project, it builds its own zlib
-+# library and tells HDF5 to add it as a dependency - this ensures that
-+# any project making use of this build of HDF5 will use the correct zlib
-+#
-+# # Tell hdf5 that we are manually overriding certain settings
-+# SET(HDF5_EXTERNALLY_CONFIGURED 1)
-+# # Avoid duplicating names of installed libraries
-+# SET(HDF5_EXTERNAL_LIB_PREFIX "vtk")
-+# # Export configuration to this export variable
-+# SET(HDF5_EXPORTED_TARGETS "paraview-targets")
-+#
-+# # Setup all necessary overrides for zlib so that HDF5 uses our
-+# # internally compiled zlib rather than any other version
-+# IF(HDF5_ENABLE_Z_LIB_SUPPORT)
-+# # We must tell the main HDF5 library that it depends on our zlib
-+# SET(HDF5_LIB_DEPENDENCIES vtkzlib)
-+# # Override the zlib header file
-+# IF(VTK_USE_SYSTEM_ZLIB)
-+# SET(H5_ZLIB_HEADER "zlib.h")
-+# ELSE(VTK_USE_SYSTEM_ZLIB)
-+# SET(H5_ZLIB_HEADER "vtk_zlib.h")
-+# # Set vars that FindZlib would have set if used in sub project
-+# SET(ZLIB_INCLUDE_DIRS "${VTK_ZLIB_INCLUDE_DIRS}")
-+# SET(ZLIB_LIBRARIES vtkzlib)
-+# ENDIF(VTK_USE_SYSTEM_ZLIB)
-+# ENDIF(HDF5_ENABLE_Z_LIB_SUPPORT)
-+#
-+# # Add the sub project
-+# ADD_SUBDIRECTORY(Utilities/hdf5-1.8)
-+#-----------------------------------------------------------------------------
-+
-+#-----------------------------------------------------------------------------
-+# Set the core names of all the libraries
-+#-----------------------------------------------------------------------------
-+SET (HDF5_LIB_CORENAME "hdf5")
-+SET (HDF5_TEST_LIB_CORENAME "hdf5_test")
-+SET (HDF5_CPP_LIB_CORENAME "hdf5_cpp")
-+SET (HDF5_HL_LIB_CORENAME "hdf5_hl")
-+SET (HDF5_HL_CPP_LIB_CORENAME "hdf5_hl_cpp")
-+SET (HDF5_TOOLS_LIB_CORENAME "hdf5_tools")
-+SET (HDF5_F90_LIB_CORENAME "hdf5_fortran")
-+SET (HDF5_F90_C_LIB_CORENAME "hdf5_f90cstub")
-+SET (HDF5_F90_TEST_LIB_CORENAME "hdf5_test_fortran")
-+SET (HDF5_F90_C_TEST_LIB_CORENAME "hdf5_test_f90cstub")
-+SET (HDF5_HL_F90_LIB_CORENAME "hdf5_hl_fortran")
-+SET (HDF5_HL_F90_C_LIB_CORENAME "hdf5_hl_f90cstub")
-+
-+#-----------------------------------------------------------------------------
-+# Set the true names of all the libraries if customized by external project
-+#-----------------------------------------------------------------------------
-+SET (HDF5_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_LIB_CORENAME}")
-+SET (HDF5_TEST_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TEST_LIB_CORENAME}")
-+SET (HDF5_CPP_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_CPP_LIB_CORENAME}")
-+SET (HDF5_HL_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_LIB_CORENAME}")
-+SET (HDF5_HL_CPP_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_CPP_LIB_CORENAME}")
-+SET (HDF5_TOOLS_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOLS_LIB_CORENAME}")
-+SET (HDF5_F90_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_LIB_CORENAME}")
-+SET (HDF5_F90_C_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_C_LIB_CORENAME}")
-+SET (HDF5_F90_TEST_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_TEST_LIB_CORENAME}")
-+SET (HDF5_F90_C_TEST_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_C_TEST_LIB_CORENAME}")
-+SET (HDF5_HL_F90_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_F90_LIB_CORENAME}")
-+SET (HDF5_HL_F90_C_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_F90_C_LIB_CORENAME}")
-+
-+#-----------------------------------------------------------------------------
-+# Set the target names of all the libraries
-+#-----------------------------------------------------------------------------
-+SET (HDF5_LIB_TARGET ${HDF5_LIB_CORENAME})
-+SET (HDF5_TEST_LIB_TARGET ${HDF5_TEST_LIB_CORENAME})
-+SET (HDF5_CPP_LIB_TARGET ${HDF5_CPP_LIB_CORENAME})
-+SET (HDF5_HL_LIB_TARGET ${HDF5_HL_LIB_CORENAME})
-+SET (HDF5_HL_CPP_LIB_TARGET ${HDF5_HL_CPP_LIB_CORENAME})
-+SET (HDF5_TOOLS_LIB_TARGET ${HDF5_TOOLS_LIB_CORENAME})
-+SET (HDF5_F90_LIB_TARGET ${HDF5_F90_LIB_CORENAME})
-+SET (HDF5_F90_C_LIB_TARGET ${HDF5_F90_C_LIB_CORENAME})
-+SET (HDF5_F90_TEST_LIB_TARGET ${HDF5_F90_TEST_LIB_CORENAME})
-+SET (HDF5_F90_C_TEST_LIB_TARGET ${HDF5_F90_C_TEST_LIB_CORENAME})
-+SET (HDF5_HL_F90_LIB_TARGET ${HDF5_HL_F90_LIB_CORENAME})
-+SET (HDF5_HL_F90_C_LIB_TARGET ${HDF5_HL_F90_C_LIB_CORENAME})
-+
-+#-----------------------------------------------------------------------------
-+# Define some CMake variables for use later in the project
-+#-----------------------------------------------------------------------------
-+SET (HDF5_RESOURCES_DIR ${HDF5_SOURCE_DIR}/config/cmake)
-+SET (HDF5_SRC_DIR ${HDF5_SOURCE_DIR}/src)
-+SET (HDF5_TEST_SRC_DIR ${HDF5_SOURCE_DIR}/test)
-+SET (HDF5_CPP_SRC_DIR ${HDF5_SOURCE_DIR}/c++)
-+SET (HDF5_CPP_TST_DIR ${HDF5_SOURCE_DIR}/c++/test)
-+SET (HDF5_HL_SRC_DIR ${HDF5_SOURCE_DIR}/hl)
-+SET (HDF5_HL_CPP_SRC_DIR ${HDF5_SOURCE_DIR}/hl/c++)
-+SET (HDF5_TOOLS_SRC_DIR ${HDF5_SOURCE_DIR}/tools)
-+SET (HDF5_PERFORM_SRC_DIR ${HDF5_SOURCE_DIR}/perform)
-+SET (HDF5_F90_SRC_DIR ${HDF5_SOURCE_DIR}/fortran)
-+
-+# set default prefix location
-+SET (CMAKE_INSTALL_PREFIX "./hdf5" CACHE PATH "Install path prefix, prepended onto install directories")
-+
-+IF (NOT HDF5_INSTALL_BIN_DIR)
-+ SET (HDF5_INSTALL_BIN_DIR bin)
-+ENDIF (NOT HDF5_INSTALL_BIN_DIR)
-+IF (NOT HDF5_INSTALL_LIB_DIR)
-+ SET (HDF5_INSTALL_LIB_DIR lib)
-+ENDIF (NOT HDF5_INSTALL_LIB_DIR)
-+IF (NOT HDF5_INSTALL_INCLUDE_DIR)
-+ SET (HDF5_INSTALL_INCLUDE_DIR include)
-+ENDIF (NOT HDF5_INSTALL_INCLUDE_DIR)
-+
-+#-----------------------------------------------------------------------------
-+# parse the full version number from H5public.h and include in H5_VERS_INFO
-+#-----------------------------------------------------------------------------
-+FILE (READ ${HDF5_SRC_DIR}/H5public.h _h5public_h_contents)
-+STRING (REGEX REPLACE ".*#define[ \t]+H5_VERS_MAJOR[ \t]+([0-9]*).*$"
-+ "\\1" H5_VERS_MAJOR ${_h5public_h_contents})
-+STRING (REGEX REPLACE ".*#define[ \t]+H5_VERS_MINOR[ \t]+([0-9]*).*$"
-+ "\\1" H5_VERS_MINOR ${_h5public_h_contents})
-+STRING (REGEX REPLACE ".*#define[ \t]+H5_VERS_RELEASE[ \t]+([0-9]*).*$"
-+ "\\1" H5_VERS_RELEASE ${_h5public_h_contents})
-+STRING (REGEX REPLACE ".*#define[ \t]+H5_VERS_SUBRELEASE[ \t]+\"([0-9A-Za-z.]*)\".*$"
-+ "\\1" H5_VERS_SUBRELEASE ${_h5public_h_contents})
-+#MESSAGE (STATUS "VERSION: ${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}-${H5_VERS_SUBRELEASE}")
-+
-+#-----------------------------------------------------------------------------
-+# Basic HDF5 stuff here
-+#-----------------------------------------------------------------------------
-+SET (HDF5_PACKAGE "hdf5")
-+SET (HDF5_PACKAGE_NAME "HDF5")
-+SET (HDF5_PACKAGE_VERSION "${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}")
-+SET (HDF5_PACKAGE_VERSION_MAJOR "${H5_VERS_MAJOR}.${H5_VERS_MINOR}")
-+SET (HDF5_PACKAGE_VERSION_MINOR "${H5_VERS_RELEASE}")
-+SET (HDF5_PACKAGE_STRING "${HDF5_PACKAGE_NAME} ${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}")
-+SET (HDF5_PACKAGE_TARNAME "hdf5")
-+SET (HDF5_PACKAGE_URL "http://www.hdfgroup.org")
-+SET (HDF5_PACKAGE_BUGREPORT "he...@hd...")
-+
-+#-----------------------------------------------------------------------------
-+# Include some macros for reusable code
-+#-----------------------------------------------------------------------------
-+INCLUDE (${HDF5_RESOURCES_DIR}/HDF5Macros.cmake)
-+
-+#-----------------------------------------------------------------------------
-+# Setup output Directories
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ SET (CMAKE_RUNTIME_OUTPUT_DIRECTORY
-+ ${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all Executables."
-+ )
-+ SET (CMAKE_LIBRARY_OUTPUT_DIRECTORY
-+ ${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all Libraries"
-+ )
-+ SET (CMAKE_ARCHIVE_OUTPUT_DIRECTORY
-+ ${PROJECT_BINARY_DIR}/bin CACHE PATH "Single Directory for all static libraries."
-+ )
-+ SET (CMAKE_Fortran_MODULE_DIRECTORY
-+ ${PROJECT_BINARY_DIR}/bin/fortran CACHE PATH "Single Directory for all fortran modules."
-+ )
-+ELSE (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ # if we are externally configured, but the project uses old cmake scripts
-+ # this may not be set and utilities like H5detect will fail
-+ IF (NOT CMAKE_RUNTIME_OUTPUT_DIRECTORY)
-+ SET (CMAKE_RUNTIME_OUTPUT_DIRECTORY ${EXECUTABLE_OUTPUT_PATH})
-+ ENDIF (NOT CMAKE_RUNTIME_OUTPUT_DIRECTORY)
-+ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+
-+#-----------------------------------------------------------------------------
-+# Targets built within this project are exported at Install time for use
-+# by other projects using FindHDF5.
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXPORTED_TARGETS)
-+ SET (HDF5_EXPORTED_TARGETS "hdf5-targets")
-+ENDIF (NOT HDF5_EXPORTED_TARGETS)
-+
-+#-----------------------------------------------------------------------------
-+# To include a library in the list exported by the project AT BUILD TIME,
-+# add it to this variable. This is NOT used by Make Install, but for projects
-+# which include hdf5 as a sub-project within their build tree
-+#-----------------------------------------------------------------------------
-+SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "")
-+
-+#-----------------------------------------------------------------------------
-+# Run all the CMake configuration tests for our build environment
-+#-----------------------------------------------------------------------------
-+INCLUDE (${HDF5_RESOURCES_DIR}/ConfigureChecks.cmake)
-+
-+#-----------------------------------------------------------------------------
-+# Option to use legacy naming for windows libs/programs, default is legacy
-+#-----------------------------------------------------------------------------
-+IF (WIN32)
-+ OPTION (H5_LEGACY_NAMING "Use Legacy Names for Libraries and Programs" ON)
-+ENDIF (WIN32)
-+
-+#-----------------------------------------------------------------------------
-+# Option to Build Shared/Static libs, default is static
-+#-----------------------------------------------------------------------------
-+OPTION (BUILD_SHARED_LIBS "Build Shared Libraries" OFF)
-+SET (LIB_TYPE STATIC)
-+IF (BUILD_SHARED_LIBS)
-+ SET (LIB_TYPE SHARED)
-+ SET (H5_BUILT_AS_DYNAMIC_LIB 1)
-+ IF (MSVC)
-+ SET (CMAKE_MFC_FLAG 0)
-+ FOREACH (flag_var
-+ CMAKE_C_FLAGS CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE
-+ CMAKE_C_FLAGS_MINSIZEREL CMAKE_C_FLAGS_RELWITHDEBINFO
-+ CMAKE_CXX_FLAGS CMAKE_CXX_FLAGS_DEBUG CMAKE_CXX_FLAGS_RELEASE
-+ CMAKE_CXX_FLAGS_MINSIZEREL CMAKE_CXX_FLAGS_RELWITHDEBINFO)
-+ IF (${flag_var} MATCHES "/MT")
-+ STRING (REGEX REPLACE "/MT" "/MD" ${flag_var} "${${flag_var}}")
-+ ENDIF (${flag_var} MATCHES "/MT")
-+ ENDFOREACH (flag_var)
-+ ENDIF (MSVC)
-+ELSE (BUILD_SHARED_LIBS)
-+ IF (NOT WIN32)
-+ # should this be a user setting : Everyone uses it anyway ?
-+ ADD_DEFINITIONS (-DPIC)
-+ ENDIF (NOT WIN32)
-+ IF (MSVC)
-+ SET (CMAKE_MFC_FLAG 0)
-+ FOREACH (flag_var
-+ CMAKE_C_FLAGS CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE
-+ CMAKE_C_FLAGS_MINSIZEREL CMAKE_C_FLAGS_RELWITHDEBINFO
-+ CMAKE_CXX_FLAGS CMAKE_CXX_FLAGS_DEBUG CMAKE_CXX_FLAGS_RELEASE
-+ CMAKE_CXX_FLAGS_MINSIZEREL CMAKE_CXX_FLAGS_RELWITHDEBINFO)
-+ IF (${flag_var} MATCHES "/MD")
-+ STRING (REGEX REPLACE "/MD" "/MT" ${flag_var} "${${flag_var}}")
-+ ENDIF (${flag_var} MATCHES "/MD")
-+ ENDFOREACH (flag_var)
-+ ENDIF (MSVC)
-+ENDIF (BUILD_SHARED_LIBS)
-+
-+#-----------------------------------------------------------------------------
-+# Option to use code coverage
-+#-----------------------------------------------------------------------------
-+OPTION (HDF5_ENABLE_COVERAGE "Enable code coverage for Libraries and Programs" OFF)
-+IF (HDF5_ENABLE_COVERAGE)
-+ SET (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -g -O0 -fprofile-arcs -ftest-coverage")
-+ SET (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -g -O0 -fprofile-arcs -ftest-coverage")
-+ SET (LDFLAGS "${LDFLAGS} -fprofile-arcs -ftest-coverage")
-+ENDIF (HDF5_ENABLE_COVERAGE)
-+
-+#-----------------------------------------------------------------------------
-+# When building utility executables that generate other (source) files :
-+# we make use of the following variables defined in the root CMakeLists.
-+# Certain systems may add /Debug or /Release to output paths
-+# and we need to call the executable from inside the CMake configuration
-+#-----------------------------------------------------------------------------
-+SET (EXE_EXT "")
-+IF (WIN32)
-+ SET (EXE_EXT ".exe")
-+ ADD_DEFINITIONS (-DBIND_TO_CURRENT_VCLIBS_VERSION=1)
-+ ADD_DEFINITIONS (-D_CRT_SECURE_NO_WARNINGS)
-+ENDIF (WIN32)
-+
-+SET (MAKE_SYSTEM)
-+IF (CMAKE_BUILD_TOOL MATCHES "make")
-+ SET (MAKE_SYSTEM 1)
-+ENDIF (CMAKE_BUILD_TOOL MATCHES "make")
-+
-+SET (CFG_INIT "/${CMAKE_CFG_INTDIR}")
-+IF (MAKE_SYSTEM)
-+ SET (CFG_INIT "")
-+ENDIF (MAKE_SYSTEM)
-+
-+#-----------------------------------------------------------------------------
-+# Add some definitions for Debug Builds
-+#-----------------------------------------------------------------------------
-+IF (CMAKE_BUILD_TYPE MATCHES Debug)
-+ ADD_DEFINITIONS (-DDEBUG)
-+ ADD_DEFINITIONS (
-+ -DH5Z_DEBUG -DH5V_DEBUG -DH5T_DEBUG
-+ -DH5S_DEBUG -DH5P_DEBUG -DH5O_DEBUG -DH5MM_DEBUG -DH5MF_DEBUG
-+ -DH5I_DEBUG -DH5HL_DEBUG -DH5HG_DEBUG -DH5G_DEBUG -DH5F_DEBUG
-+ -DH5E_DEBUG -DH5D_DEBUG -DH5B_DEBUG -DH5AC_DEBUG -UNDEBUG
-+ )
-+ OPTION (HDF5_ENABLE_TRACE "Enable API tracing capability" ON)
-+ IF (HDF5_ENABLE_TRACE)
-+ ADD_DEFINITIONS (-DH5_DEBUG_API )
-+ ENDIF (HDF5_ENABLE_TRACE)
-+ #-- NMake Makefiles will overwhelm the console with warnings if -Wall is used.
-+ IF (NOT WIN32)
-+ ADD_DEFINITIONS (-Wall)
-+ ENDIF (NOT WIN32)
-+ELSE (CMAKE_BUILD_TYPE MATCHES Debug)
-+ ADD_DEFINITIONS (-UH5_DEBUG_API -DNDEBUG)
-+ OPTION (HDF5_ENABLE_TRACE "Enable API tracing capability" OFF)
-+ IF (HDF5_ENABLE_TRACE)
-+ ADD_DEFINITIONS (-DH5_DEBUG_API )
-+ ENDIF (HDF5_ENABLE_TRACE)
-+ENDIF (CMAKE_BUILD_TYPE MATCHES Debug)
-+
-+#-----------------------------------------------------------------------------
-+# Compiler specific flags : Shouldn't there be compiler tests for these
-+#-----------------------------------------------------------------------------
-+IF (CMAKE_COMPILER_IS_GNUCC)
-+ SET (CMAKE_C_FLAGS "${CMAKE_ANSI_CFLAGS} ${CMAKE_C_FLAGS} -std=c99 -fomit-frame-pointer -finline-functions -fno-common")
-+ENDIF (CMAKE_COMPILER_IS_GNUCC)
-+
-+#-----------------------------------------------------------------------------
-+# Option to allow the user to disable compiler warnings
-+#-----------------------------------------------------------------------------
-+OPTION (HDF5_DISABLE_COMPILER_WARNINGS "Disable compiler warnings" OFF)
-+IF (HDF5_DISABLE_COMPILER_WARNINGS)
-+ # MSVC uses /w to suppress warnings. It also complains if another
-+ # warning level is given, so remove it.
-+ IF (MSVC)
-+ SET (HDF5_WARNINGS_BLOCKED 1)
-+ STRING (REGEX REPLACE "(^| )([/-])W[0-9]( |$)" " "
-+ CMAKE_C_FLAGS "${CMAKE_C_FLAGS}")
-+ SET (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} /w")
-+ ENDIF (MSVC)
-+ IF (WIN32)
-+ ADD_DEFINITIONS (-D_CRT_SECURE_NO_WARNINGS)
-+ ENDIF (WIN32)
-+ # Borland uses -w- to suppress warnings.
-+ IF (BORLAND)
-+ SET (HDF5_WARNINGS_BLOCKED 1)
-+ SET (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -w-")
-+ ENDIF (BORLAND)
-+
-+ # Most compilers use -w to suppress warnings.
-+ IF (NOT HDF5_WARNINGS_BLOCKED)
-+ SET (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -w")
-+ ENDIF (NOT HDF5_WARNINGS_BLOCKED)
-+ENDIF (HDF5_DISABLE_COMPILER_WARNINGS)
-+
-+#-----------------------------------------------------------------------------
-+# This is in here to help some of the GCC based IDES like Eclipse
-+# and code blocks parse the compiler errors and warnings better.
-+#-----------------------------------------------------------------------------
-+IF (CMAKE_COMPILER_IS_GNUCC)
-+ SET (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -fmessage-length=0")
-+ENDIF (CMAKE_COMPILER_IS_GNUCC)
-+IF (CMAKE_COMPILER_IS_GNUCXX)
-+ SET (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fmessage-length=0")
-+ENDIF (CMAKE_COMPILER_IS_GNUCXX)
-+
-+#-----------------------------------------------------------------------------
-+# All libs/tests/examples need the main include directories
-+#-----------------------------------------------------------------------------
-+INCLUDE_DIRECTORIES (${HDF5_BINARY_DIR} ${HDF5_SRC_DIR})
-+
-+#-----------------------------------------------------------------------------
-+# Option to Enable MPI Parallel
-+#-----------------------------------------------------------------------------
-+SET (CMAKE_MODULE_PATH ${HDF5_RESOURCES_DIR} ${CMAKE_MODULE_PATH})
-+OPTION (HDF5_ENABLE_PARALLEL "Enable parallel build (requires MPI)" OFF)
-+IF (HDF5_ENABLE_PARALLEL)
-+ INCLUDE (FindMPI)
-+ INCLUDE_DIRECTORIES (${MPI_INCLUDE_PATH})
-+ IF (MPI_FOUND)
-+ SET (H5_HAVE_PARALLEL 1)
-+ # MPI checks, only do these if MPI_FOUND is true, otherwise they always fail
-+ # and once set, they are cached as false and not regenerated
-+ SET (CMAKE_REQUIRED_LIBRARIES "${MPI_LIBRARY};${MPI_EXTRA_LIBRARY}" )
-+ CHECK_FUNCTION_EXISTS (MPI_File_get_size H5_HAVE_MPI_GET_SIZE)
-+ # Used by Fortran + MPI
-+ CHECK_SYMBOL_EXISTS (MPI_Comm_c2f "${MPI_INCLUDE_PATH}/mpi.h" H5_HAVE_MPI_MULTI_LANG_Comm)
-+ CHECK_SYMBOL_EXISTS (MPI_Info_c2f "${MPI_INCLUDE_PATH}/mpi.h" H5_HAVE_MPI_MULTI_LANG_Info)
-+ ENDIF (MPI_FOUND)
-+ENDIF (HDF5_ENABLE_PARALLEL)
-+
-+# Parallel IO usage requires MPI to be Linked and Included
-+IF (H5_HAVE_PARALLEL)
-+ SET (LINK_LIBS ${LINK_LIBS} ${MPI_LIBRARY})
-+ IF (MPI_LINK_FLAGS)
-+ SET (CMAKE_EXE_LINKER_FLAGS ${MPI_LINK_FLAGS} ${CMAKE_EXE_LINKER_FLAGS})
-+ ENDIF (MPI_LINK_FLAGS)
-+ IF (MPI_EXTRA_LIBRARY)
-+ SET (LINK_LIBS ${LINK_LIBS} ${MPI_EXTRA_LIBRARY})
-+ ENDIF (MPI_EXTRA_LIBRARY)
-+ENDIF (H5_HAVE_PARALLEL)
-+
-+#-----------------------------------------------------------------------------
-+# Option to use 1.6.x API
-+#-----------------------------------------------------------------------------
-+OPTION (HDF5_USE_16_API_DEFAULT "Use the HDF5 1.6.x API by default" OFF)
-+SET (H5_USE_16_API_DEFAULT 0)
-+IF (HDF5_USE_16_API_DEFAULT)
-+ SET (H5_USE_16_API_DEFAULT 1)
-+ENDIF (HDF5_USE_16_API_DEFAULT)
-+
-+#-----------------------------------------------------------------------------
-+# Options for HDF5 Filters
-+#-----------------------------------------------------------------------------
-+MACRO (HDF5_SETUP_FILTERS FILTER)
-+ OPTION (HDF5_USE_FILTER_${FILTER} "Use the ${FILTER} Filter" ON)
-+ IF (HDF5_USE_FILTER_${FILTER})
-+ SET (H5_HAVE_FILTER_${FILTER} 1)
-+ ENDIF (HDF5_USE_FILTER_${FILTER})
-+ # MESSAGE (STATUS "Filter ${FILTER} is ${HDF5_USE_FILTER_${FILTER}}")
-+ENDMACRO (HDF5_SETUP_FILTERS)
-+
-+HDF5_SETUP_FILTERS (SHUFFLE)
-+HDF5_SETUP_FILTERS (FLETCHER32)
-+HDF5_SETUP_FILTERS (NBIT)
-+HDF5_SETUP_FILTERS (SCALEOFFSET)
-+
-+#-----------------------------------------------------------------------------
-+# Option for ZLib support
-+#-----------------------------------------------------------------------------
-+OPTION (HDF5_ENABLE_Z_LIB_SUPPORT "Enable Zlib Filters" OFF)
-+IF (HDF5_ENABLE_Z_LIB_SUPPORT)
-+ IF (NOT H5_ZLIB_HEADER)
-+ FIND_PACKAGE (ZLIB REQUIRED)
-+ IF (ZLIB_FOUND)
-+ SET (H5_HAVE_FILTER_DEFLATE 1)
-+ SET (H5_HAVE_ZLIB_H 1)
-+ SET (H5_HAVE_LIBZ 1)
-+ SET (H5_ZLIB_HEADER "zlib.h")
-+ ELSE (ZLIB_FOUND)
-+ MESSAGE (FATAL " ZLib is Required for ZLib support in HDF5")
-+ ENDIF (ZLIB_FOUND)
-+ ELSE (NOT H5_ZLIB_HEADER)
-+ # This project is being called from within another and ZLib is already configured
-+ SET (H5_HAVE_FILTER_DEFLATE 1)
-+ SET (H5_HAVE_ZLIB_H 1)
-+ SET (H5_HAVE_LIBZ 1)
-+ ENDIF (NOT H5_ZLIB_HEADER)
-+ SET (LINK_LIBS ${LINK_LIBS} ${ZLIB_LIBRARIES})
-+ INCLUDE_DIRECTORIES (${ZLIB_INCLUDE_DIRS})
-+ MESSAGE (STATUS "Filter ZLIB is ON")
-+ENDIF (HDF5_ENABLE_Z_LIB_SUPPORT)
-+
-+#-----------------------------------------------------------------------------
-+# Option for SzLib support
-+#-----------------------------------------------------------------------------
-+SET (CMAKE_MODULE_PATH ${HDF5_RESOURCES_DIR} ${CMAKE_MODULE_PATH})
-+OPTION (HDF5_ENABLE_SZIP_SUPPORT "Use SZip Filter" OFF)
-+IF (HDF5_ENABLE_SZIP_SUPPORT)
-+ FIND_PACKAGE (SZIP REQUIRED)
-+ IF (SZIP_FOUND)
-+ SET (H5_HAVE_FILTER_SZIP 1)
-+ SET (H5_HAVE_SZLIB_H 1)
-+ SET (H5_HAVE_LIBSZ 1)
-+ SET (LINK_LIBS ${LINK_LIBS} ${SZIP_LIBRARIES})
-+ INCLUDE_DIRECTORIES (${SZIP_INCLUDE_DIRS})
-+# MESSAGE (STATUS "SZIP_INCLUDE_DIRS: ${SZIP_INCLUDE_DIRS}")
-+# MESSAGE (STATUS "SZIP_INCLUDE_DIR: ${SZIP_INCLUDE_DIR}")
-+ MESSAGE (STATUS "Filter SZIP is ON")
-+ OPTION (HDF5_ENABLE_SZIP_ENCODING "Use SZip Encoding" OFF)
-+ IF (HDF5_ENABLE_SZIP_ENCODING)
-+ SET (H5_HAVE_SZIP_ENCODER 1)
-+ ENDIF (HDF5_ENABLE_SZIP_ENCODING)
-+ ELSE (SZIP_FOUND)
-+ MESSAGE (FATAL_ERROR "SZIP is Required for SZIP support in HDF5")
-+ ENDIF (SZIP_FOUND)
-+ENDIF (HDF5_ENABLE_SZIP_SUPPORT)
-+
-+#-----------------------------------------------------------------------------
-+# Option for external libraries on windows
-+#-----------------------------------------------------------------------------
-+IF (WIN32)
-+ OPTION (HDF5_PACKAGE_EXTLIBS "CPACK - include external libraries" OFF)
-+ IF (BUILD_SHARED_LIBS)
-+ FILE (MAKE_DIRECTORY ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${BLDTYPE})
-+
-+ IF (HDF5_ENABLE_Z_LIB_SUPPORT AND ZLIB_FOUND)
-+ GET_FILENAME_COMPONENT(ZLIB_DLL_NAME ${ZLIB_LIBRARY} NAME_WE)
-+ # MESSAGE (STATUS "ZLIB_DLL_NAME: ${ZLIB_DLL_NAME}")
-+ GET_FILENAME_COMPONENT(ZLIB_BIN_PATH ${ZLIB_LIBRARY} PATH)
-+ # MESSAGE (STATUS "ZLIB_BIN_PATH: ${ZLIB_BIN_PATH}")
-+ ADD_CUSTOM_TARGET (ZLIB-Release-Copy ALL
-+ COMMAND ${CMAKE_COMMAND} -E copy_if_different ${ZLIB_BIN_PATH}/${ZLIB_DLL_NAME}.dll ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${CMAKE_CFG_INTDIR}/
-+ COMMENT "Copying ${ZLIB_BIN_PATH}/${ZLIB_DLL_NAME}.dll to ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${CMAKE_CFG_INTDIR}/"
-+ )
-+ ENDIF (HDF5_ENABLE_Z_LIB_SUPPORT AND ZLIB_FOUND)
-+
-+ IF (HDF5_ENABLE_SZIP_SUPPORT AND SZIP_FOUND)
-+ GET_FILENAME_COMPONENT(SZIP_DLL_NAME ${SZIP_LIBRARY} NAME_WE)
-+ # MESSAGE (STATUS "SZIP_DLL_NAME: ${SZIP_DLL_NAME}")
-+ GET_FILENAME_COMPONENT(SZIP_BIN_PATH ${SZIP_LIBRARY} PATH)
-+ # MESSAGE (STATUS "SZIP_BIN_PATH: ${SZIP_BIN_PATH}")
-+ ADD_CUSTOM_TARGET (SZIP-Release-Copy ALL
-+ COMMAND ${CMAKE_COMMAND} -E copy_if_different ${SZIP_BIN_PATH}/${SZIP_DLL_NAME}.dll ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${CMAKE_CFG_INTDIR}/
-+ COMMENT "Copying ${SZIP_BIN_PATH}/${SZIP_DLL_NAME}.dll to ${CMAKE_RUNTIME_OUTPUT_DIRECTORY}/${CMAKE_CFG_INTDIR}/"
-+ )
-+ ENDIF (HDF5_ENABLE_SZIP_SUPPORT AND SZIP_FOUND)
-+
-+ ENDIF (BUILD_SHARED_LIBS)
-+ENDIF (WIN32)
-+
-+#-----------------------------------------------------------------------------
-+# Option to use threadsafe
-+# Note: Currently CMake only allows configuring of threadsafe on WINDOWS.
-+#-----------------------------------------------------------------------------
-+IF (WIN32)
-+ OPTION (HDF5_ENABLE_THREADSAFE "Enable Threadsafety" OFF)
-+ IF (HDF5_ENABLE_THREADSAFE)
-+ SET (H5_HAVE_WIN_THREADS 1)
-+ SET (H5_HAVE_THREADSAFE 1)
-+ ENDIF (HDF5_ENABLE_THREADSAFE)
-+ENDIF (WIN32)
-+
-+#-----------------------------------------------------------------------------
-+# Option to use PACKED BITS SUPPORT
-+#-----------------------------------------------------------------------------
-+OPTION (HDF5_USE_H5DUMP_PACKED_BITS "Use the PACKED BITS feature in h5dump" OFF)
-+SET (H5_HAVE_H5DUMP_PACKED_BITS 0)
-+IF (HDF5_USE_H5DUMP_PACKED_BITS)
-+ SET (H5_HAVE_H5DUMP_PACKED_BITS 1)
-+ENDIF (HDF5_USE_H5DUMP_PACKED_BITS)
-+
-+#-----------------------------------------------------------------------------
-+# Add the HDF5 Library Target to the build
-+#-----------------------------------------------------------------------------
-+ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/src ${PROJECT_BINARY_DIR}/src)
-+
-+#-----------------------------------------------------------------------------
-+# Build utility to copy and strip X lines of file
-+#-----------------------------------------------------------------------------
-+IF (HDF5_BUILD_TOOLS AND BUILD_TESTING)
-+ SET (XLATE_UTILITY "xlatefile")
-+ ADD_EXECUTABLE(${XLATE_UTILITY} ${HDF5_RESOURCES_DIR}/xlatefile.c)
-+ENDIF (HDF5_BUILD_TOOLS AND BUILD_TESTING)
-+
-+#-----------------------------------------------------------------------------
-+# Dashboard and Testing Settings
-+#-----------------------------------------------------------------------------
-+OPTION (BUILD_TESTING "Build HDF5 Unit Testing" OFF)
-+IF (BUILD_TESTING)
-+ SET (DART_TESTING_TIMEOUT 1200
-+ CACHE INTEGER
-+ "Timeout in seconds for each test (default 1200=20minutes)"
-+ )
-+ ENABLE_TESTING ()
-+ INCLUDE (CTest)
-+ IF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ IF (EXISTS "${HDF5_SOURCE_DIR}/test" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/test")
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/tools/lib ${PROJECT_BINARY_DIR}/tools/lib)
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/test ${PROJECT_BINARY_DIR}/test)
-+ ENDIF (EXISTS "${HDF5_SOURCE_DIR}/test" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/test")
-+ IF (EXISTS "${HDF5_SOURCE_DIR}/perform" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/perform")
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/perform ${PROJECT_BINARY_DIR}/perform)
-+ ENDIF(EXISTS "${HDF5_SOURCE_DIR}/perform" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/perform")
-+ IF (H5_HAVE_PARALLEL)
-+ IF (EXISTS "${HDF5_SOURCE_DIR}/testpar" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/testpar")
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/testpar ${PROJECT_BINARY_DIR}/testpar)
-+ ENDIF (EXISTS "${HDF5_SOURCE_DIR}/testpar" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/testpar")
-+ ENDIF (H5_HAVE_PARALLEL)
-+ ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ INCLUDE (${HDF5_SOURCE_DIR}/CTestConfig.cmake)
-+ENDIF (BUILD_TESTING)
-+
-+#-----------------------------------------------------------------------------
-+# Option to build Fortran bindings/tests/examples
-+# Make sure this appears before the CONFIGURE_FILE step
-+# so that fortran name mangling is detected before writing H5pubconf.h
-+#-----------------------------------------------------------------------------
-+# Set default name mangling : overridden by Fortran detection in fortran dir
-+SET (H5_FC_FUNC "H5_FC_FUNC(name,NAME) name ## _")
-+SET (H5_FC_FUNC_ "H5_FC_FUNC_(name,NAME) name ## _")
-+IF (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/fortran")
-+ OPTION (HDF5_BUILD_FORTRAN "Build FORTRAN support" OFF)
-+ IF (HDF5_BUILD_FORTRAN)
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/fortran ${PROJECT_BINARY_DIR}/fortran)
-+ IF (HDF5_BUILD_HL_LIB)
-+ IF (EXISTS "${HDF5_SOURCE_DIR}/hl/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/hl/fortran")
-+ #-- Build the High Level Fortran source codes
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/hl/fortran ${HDF5_BINARY_DIR}/hl/fortran)
-+ ENDIF (EXISTS "${HDF5_SOURCE_DIR}/hl/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/hl/fortran")
-+ ENDIF (HDF5_BUILD_HL_LIB)
-+ ENDIF (HDF5_BUILD_FORTRAN)
-+ENDIF (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/fortran")
-+
-+#-----------------------------------------------------------------------------
-+# Option to build examples
-+#-----------------------------------------------------------------------------
-+IF (EXISTS "${HDF5_SOURCE_DIR}/examples" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/examples")
-+ OPTION (HDF5_BUILD_EXAMPLES "Build HDF5 Library Examples" OFF)
-+ IF (HDF5_BUILD_EXAMPLES)
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/examples ${PROJECT_BINARY_DIR}/examples)
-+ ENDIF (HDF5_BUILD_EXAMPLES)
-+ENDIF (EXISTS "${HDF5_SOURCE_DIR}/examples" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/examples")
-+
-+#-----------------------------------------------------------------------------
-+# Option to build HDF5 C++ Library
-+#-----------------------------------------------------------------------------
-+IF (EXISTS "${HDF5_SOURCE_DIR}/c++" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/c++")
-+ OPTION (HDF5_BUILD_CPP_LIB "Build HDF5 C++ Library" OFF)
-+ IF (HDF5_BUILD_CPP_LIB)
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/c++ ${PROJECT_BINARY_DIR}/c++)
-+ ENDIF (HDF5_BUILD_CPP_LIB)
-+ENDIF (EXISTS "${HDF5_SOURCE_DIR}/c++" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/c++")
-+
-+#-----------------------------------------------------------------------------
-+# Option to build HDF5 Tools
-+#-----------------------------------------------------------------------------
-+IF (EXISTS "${HDF5_SOURCE_DIR}/tools" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/tools")
-+ OPTION (HDF5_BUILD_TOOLS "Build HDF5 Tools" OFF)
-+ IF (HDF5_BUILD_TOOLS)
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/tools ${PROJECT_BINARY_DIR}/tools)
-+ ENDIF (HDF5_BUILD_TOOLS)
-+ENDIF (EXISTS "${HDF5_SOURCE_DIR}/tools" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/tools")
-+
-+#-----------------------------------------------------------------------------
-+# Option to build High Level API's
-+#-----------------------------------------------------------------------------
-+IF (EXISTS "${HDF5_SOURCE_DIR}/hl" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/hl")
-+ OPTION (HDF5_BUILD_HL_LIB "Build HIGH Level HDF5 Library" OFF)
-+ IF (HDF5_BUILD_HL_LIB)
-+ SET (H5_INCLUDE_HL 1)
-+ ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/hl ${PROJECT_BINARY_DIR}/hl)
-+ ENDIF (HDF5_BUILD_HL_LIB)
-+ENDIF (EXISTS "${HDF5_SOURCE_DIR}/hl" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/hl")
-+
-+#-----------------------------------------------------------------------------
-+# Generate the H5pubconf.h file containing user settings needed by compilation
-+#-----------------------------------------------------------------------------
-+CONFIGURE_FILE (${HDF5_RESOURCES_DIR}/H5pubconf.h.in ${HDF5_BINARY_DIR}/H5pubconf.h @ONLY)
-+
-+#-----------------------------------------------------------------------------
-+# Add file(s) to CMake Install
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_INSTALL_NO_DEVELOPMENT)
-+ INSTALL (
-+ FILES ${PROJECT_BINARY_DIR}/H5pubconf.h
-+ DESTINATION ${HDF5_INSTALL_INCLUDE_DIR}
-+ COMPONENT headers
-+ )
-+ENDIF (NOT HDF5_INSTALL_NO_DEVELOPMENT)
-+
-+#-----------------------------------------------------------------------------
-+# Option for external libraries on windows
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ IF (HDF5_PACKAGE_EXTLIBS)
-+ IF (HDF5_ENABLE_Z_LIB_SUPPORT AND ZLIB_FOUND)
-+ INSTALL (
-+ FILES ${ZLIB_INCLUDE_DIR}/zconf.h ${ZLIB_INCLUDE_DIR}/zlib.h
-+ DESTINATION ${HDF5_INSTALL_INCLUDE_DIR}
-+ COMPONENT headers
-+ )
-+ INSTALL(
-+ FILES ${ZLIB_LIBRARY}
-+ DESTINATION ${HDF5_INSTALL_LIB_DIR}
-+ COMPONENT libraries
-+ )
-+ IF (BUILD_SHARED_LIBS)
-+ GET_FILENAME_COMPONENT(ZLIB_DLL_NAME ${ZLIB_LIBRARY} NAME_WE)
-+ # message(STATUS "ZLIB_DLL_NAME: ${ZLIB_DLL_NAME}")
-+ GET_FILENAME_COMPONENT(ZLIB_BIN_PATH ${ZLIB_LIBRARY} PATH)
-+ # message(STATUS "ZLIB_BIN_PATH: ${ZLIB_BIN_PATH}")
-+ INSTALL(
-+ FILES ${ZLIB_BIN_PATH}/${ZLIB_DLL_NAME}.dll
-+ DESTINATION ${HDF5_INSTALL_BIN_DIR}
-+ COMPONENT libraries
-+ )
-+ ENDIF (BUILD_SHARED_LIBS)
-+ ENDIF (HDF5_ENABLE_Z_LIB_SUPPORT AND ZLIB_FOUND)
-+ IF (HDF5_ENABLE_SZIP_SUPPORT AND SZIP_FOUND)
-+ INSTALL (
-+ FILES ${SZIP_INCLUDE_DIR}/SZconfig.h ${SZIP_INCLUDE_DIR}/szlib.h ${SZIP_INCLUDE_DIR}/szip_adpt.h ${SZIP_INCLUDE_DIR}/ricehdf.h
-+ DESTINATION ${HDF5_INSTALL_INCLUDE_DIR}
-+ COMPONENT headers
-+ )
-+ INSTALL(
-+ FILES ${SZIP_LIBRARY}
-+ DESTINATION ${HDF5_INSTALL_LIB_DIR}
-+ COMPONENT libraries
-+ )
-+ IF (BUILD_SHARED_LIBS)
-+ GET_FILENAME_COMPONENT(SZIP_DLL_NAME ${SZIP_LIBRARY} NAME_WE)
-+ # message(STATUS "SZIP_DLL_NAME: ${SZIP_DLL_NAME}")
-+ GET_FILENAME_COMPONENT(SZIP_BIN_PATH ${SZIP_LIBRARY} PATH)
-+ # message(STATUS "SZIP_BIN_PATH: ${ZLIB_BIN_PATH}")
-+ INSTALL(
-+ FILES ${SZIP_BIN_PATH}/${SZIP_DLL_NAME}.dll
-+ DESTINATION ${HDF5_INSTALL_BIN_DIR}
-+ COMPONENT libraries
-+ )
-+ ENDIF (BUILD_SHARED_LIBS)
-+ ENDIF (HDF5_ENABLE_SZIP_SUPPORT AND SZIP_FOUND)
-+ ENDIF (HDF5_PACKAGE_EXTLIBS)
-+ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+
-+#-----------------------------------------------------------------------------
-+# Add Target(s) to CMake Install for import into other projects
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ INSTALL (
-+ EXPORT ${HDF5_EXPORTED_TARGETS}
-+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake/hdf5-${HDF5_PACKAGE_VERSION}
-+ FILE hdf5-targets.cmake
-+ )
-+ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+
-+#-----------------------------------------------------------------------------
-+# Export all exported targets to the build tree for use by parent project
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ EXPORT (
-+ TARGETS ${HDF5_LIBRARIES_TO_EXPORT} ${HDF5_LIB_DEPENDENCIES}
-+ FILE hdf5-targets.cmake
-+ )
-+ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+
-+#-----------------------------------------------------------------------------
-+# Configure the hdf5-config.cmake file for the build directory
-+#-----------------------------------------------------------------------------
-+SET (HDF5_INCLUDES_BUILD_TIME
-+ ${HDF5_SRC_DIR} ${HDF5_CPP_SRC_DIR} ${HDF5_HL_SRC_DIR}
-+ ${HDF5_TOOLS_SRC_DIR} ${HDF5_BINARY_DIR}
-+)
-+SET (HDF5_VERSION_STRING @HDF5_PACKAGE_VERSION@)
-+SET (HDF5_VERSION_MAJOR @HDF5_PACKAGE_VERSION_MAJOR@)
-+SET (HDF5_VERSION_MINOR @HDF5_PACKAGE_VERSION_MINOR@)
-+
-+CONFIGURE_FILE (
-+ ${HDF5_RESOURCES_DIR}/hdf5-config.cmake.build.in
-+ ${HDF5_BINARY_DIR}/hdf5-config.cmake @ONLY
-+)
-+
-+#-----------------------------------------------------------------------------
-+# Configure the hdf5-config.cmake file for the install directory
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ CONFIGURE_FILE (
-+ ${HDF5_RESOURCES_DIR}/hdf5-config.cmake.install.in
-+ ${HDF5_BINARY_DIR}/CMakeFiles/hdf5-config.cmake @ONLY
-+ )
-+ INSTALL (
-+ FILES ${HDF5_BINARY_DIR}/CMakeFiles/hdf5-config.cmake
-+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake/hdf5-${HDF5_PACKAGE_VERSION}
-+ )
-+ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+
-+#-----------------------------------------------------------------------------
-+# Configure the hdf5-config-version .cmake file for the install directory
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+ CONFIGURE_FILE (
-+ ${HDF5_RESOURCES_DIR}/hdf5-config-version.cmake.in
-+ ${HDF5_BINARY_DIR}/CMakeFiles/hdf5-config-version.cmake @ONLY
-+ )
-+ INSTALL (
-+ FILES ${HDF5_BINARY_DIR}/CMakeFiles/hdf5-config-version.cmake
-+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake/hdf5-${HDF5_PACKAGE_VERSION}
-+ )
-+ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED)
-+
-+#-----------------------------------------------------------------------------
-+# Set the cpack variables
-+#-----------------------------------------------------------------------------
-+IF (NOT HDF5_EXTERNALLY_CONFIGURED AND EXISTS "${HDF5_SOURCE_DIR}/release_docs")
-+ SET (CPACK_PACKAGE_VENDOR "The HDF Group")
-+ SET (CPACK_PACKAGE_NAME "${HDF5_PACKAGE_NAME}")
-+ SET (CPACK_PACKAGE_VERSION "${HDF5_PACKAGE_VERSION}")
-+ SET (CPACK_PACKAGE_VERSION_MAJOR "${HDF5_PACKAGE_VERSION_MAJOR}")
-+ SET (CPACK_PACKAGE_VERSION_MINOR "${HDF5_PACKAGE_VERSION_MINOR}")
-+ SET (CPACK_PACKAGE_VERSION_PATCH "")
-+ SET (CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/release_docs/COPYING")
-+
-+ IF (WIN32)
-+ SET (CPACK_NSIS_PACKAGE_NAME "HDF5 ${HDF5_PACKAGE_VERSION}")
-+ ENDIF (WIN32)
-+
-+ INCLUDE (CPack)
-+
-+ #---------------------------------------------------------------------------
-+ # Now list the cpack commands
-+ #---------------------------------------------------------------------------
-+ CPACK_ADD_COMPONENT (hdfapplications
-+ DISPLAY_NAME "HDF5 Applications"
-+ DEPENDS libraries
-+ GROUP Applications
-+ )
-+ CPACK_ADD_COMPONENT (libraries
-+ DISPLAY_NAME "HDF5 Libraries"
-+ GROUP Runtime
-+ )
-+ CPACK_ADD_COMPONENT (headers
-+ DISPLAY_NAME "HDF5 Headers"
-+ DEPENDS libraries
-+ GROUP Development
-+ )
-+
-+ IF (HDF5_BUILD_FORTRAN)
-+ CPACK_ADD_COMPONENT (fortlibraries
-+ DISPLAY_NAME "HDF5 Fortran Libraries"
-+ DEPENDS libraries
-+ GROUP Runtime
-+ )
-+ CPACK_ADD_COMPONENT (fortheaders
-+ DISPLAY_NAME "HDF5 Fortran Headers"
-+ DEPENDS fortlibraries
-+ GROUP Development
-+ )
-+ ENDIF (HDF5_BUILD_FORTRAN)
-+
-+ IF (HDF5_BUILD_CPP_LIB)
-+ CPACK_ADD_COMPONENT (cpplibraries
-+ DISPLAY_NAME "HDF5 C++ Libraries"
-+ DEPENDS libraries
-+ GROUP Runtime
-+ )
-+ CPACK_ADD_COMPONENT (cppheaders
-+ DISPLAY_NAME "HDF5 C++ Headers"
-+ DEPENDS cpplibraries
-+ GROUP Development
-+ )
-+ ENDIF (HDF5_BUILD_CPP_LIB)
-+
-+ IF (HDF5_BUILD_TOOLS)
-+ CPACK_ADD_COMPONENT (toolsapplications
-+ DISPLAY_NAME "HDF5 Tools Applications"
-+ DEPENDS toolslibraries
-+ GROUP Applications
-+ )
-+ CPACK_ADD_COMPONENT (toolslibraries
-+ DISPLAY_NAME "HDF5 Tools Libraries"
-+ DEPENDS libraries
-+ GROUP Runtime
-+ )
-+ CPACK_ADD_COMPONENT (toolsheaders
-+ DISPLAY_NAME "HDF5 Tools Headers"
-+ DEPENDS toolslibraries
-+ GROUP Development
-+ )
-+ ENDIF (HDF5_BUILD_TOOLS)
-+
-+ IF (HDF5_BUILD_HL_LIB)
-+ CPACK_ADD_COMPONENT (hllibraries
-+ DISPLAY_NAME "HDF5 HL Libraries"
-+ DEPENDS libraries
-+ GROUP Runtime
-+ )
-+ CPACK_ADD_COMPONENT (hlheaders
-+ DISPLAY_NAME "HDF5 HL Headers"
-+ DEPENDS hllibraries
-+ GROUP Development
-+ )
-+ CPACK_ADD_COMPONENT (hltoolsapplications
-+ DISPLAY_NAME "HDF5 HL Tools Applications"
-+ DEPENDS hllibraries
-+ GROUP Applications
-+ )
-+ CPACK_ADD_COMPONENT (hlcpplibraries
-+ DISPLAY_NAME "HDF5 HL C++ Libraries"
-+ DEPENDS hllibraries
-+ GROUP Runtime
-+ )
-+ CPACK_ADD_COMPONENT (hlcppheaders
-+ DISPLAY_NAME "HDF5 HL C++ Headers"
-+ DEPENDS hlcpplibraries
-+ GROUP Development
-+ )
-+ CPACK_ADD_COMPONENT (hlfortlibraries
-+ DISPLAY_NAME "HDF5 HL Fortran Libraries"
-+ DEPENDS fortlibraries
-+ GROUP Runtime
-+ )
-+ ENDIF (HDF5_BUILD_HL_LIB)
-+
-+ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED AND EXISTS "${HDF5_SOURCE_DIR}/release_docs")
-diff -rupN hdf5-1.8.6/COPYING hdf5-1.8.6.patched/COPYING
---- hdf5-1.8.6/COPYING 1969-12-31 16:00:00.000000000 -0800
-+++ hdf5-1.8.6.patched/COPYING 2011-02-14 08:23:44.000000000 -0800
-@@ -0,0 +1,92 @@
-+
-+Copyright Notice and License Terms for
-+HDF5 (Hierarchical Data Format 5) Software Library and Utilities
-+-----------------------------------------------------------------------------
-+
-+HDF5 (Hierarchical Data Format 5) Software Library and Utilities
-+Copyright 2006-2010 by The HDF Group.
-+
-+NCSA HDF5 (Hierarchical Data Format 5) Software Library and Utilities
-+Copyright 1998-2006 by the Board of Trustees of the University of Illinois.
-+
-+All rights reserved.
-+
-+Redistribution and use in source and binary forms, with or without
-+modification, are permitted for any purpose (including commercial purposes)
-+provided that the following conditions are met:
-+
-+1. Redistributions of source code must retain the above copyright notice,
-+ this list of conditions, and the following disclaimer.
-+
-+2. Redistributions in binary form must reproduce the above copyright notice,
-+ this list of conditions, and the following disclaimer in the documentation
-+ and/or materials provided with the distribution.
-+
-+3. In addition, redistributions of modified forms of the source or binary
-+ code must carry prominent notices stating that the original code was
-+ changed and the date of the change.
-+
-+4. All publications or advertising materials mentioning features or use of
-+ this software are asked, but not required, to acknowledge that it was
-+ developed by The HDF Group and by the National Center for Supercomputing
-+ Applications at the University of Illinois at Urbana-Champaign and
-+ credit the contributors.
-+
-+5. Neither the name of The HDF Group, the name of the University, nor the
-+ name of any Contributor may be used to endorse or promote products derived
-+ from this software without specific prior written permission from
-+ The HDF Group, the University, or the Contributor, respectively.
-+
-+DISCLAIMER:
-+THIS SOFTWARE IS PROVIDED BY THE HDF GROUP AND THE CONTRIBUTORS
-+"AS IS" WITH NO WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED. In no
-+event shall The HDF Group or the Contributors be liable for any damages
-+suffered by the users arising out of the use of this software, even if
-+advised of the possibility of such damage.
-+
-+-----------------------------------------------------------------------------
-+-----------------------------------------------------------------------------
-+
-+Contributors: National Center for Supercomputing Applications (NCSA) at
-+the University of Illinois, Fortner Software, Unidata Program Center (netCDF),
-+The Independent JPEG Group (JPEG), Jean-loup Gailly and Mark Adler (gzip),
-+and Digital Equipment Corporation (DEC).
-+
-+-----------------------------------------------------------------------------
-+
-+Portions of HDF5 were developed with support from the Lawrence Berkeley
-+National Laboratory (LBNL) and the United States Department of Energy
-+under Prime Contract No. DE-AC02-05CH11231.
-+
-+-----------------------------------------------------------------------------
-+
-+Portions of HDF5 were developed with support from the University of
-+California, Lawrence Livermore National Laboratory (UC LLNL).
-+The following statement applies to those portions of the product and must
-+be retained in any redistribution of source code, binaries, documentation,
-+and/or accompanying materials:
-+
-+ This work was partially produced at the University of California,
-+ Lawrence Livermore National Laboratory (UC LLNL) under contract
-+ no. W-7405-ENG-48 (Contract 48) between the U.S. Department of Energy
-+ (DOE) and The Regents of the University of California (University)
-+ for the operation of UC LLNL.
-+
-+ DISCLAIMER:
-+ This work was prepared as an account of work sponsored by an agency of
-+ the United States Government. Neither the United States Government nor
-+ the University of California nor any of their employees, makes any
-+ warranty, express or implied, or assumes any liability or responsibility
-+ for the accuracy, completeness, or usefulness of any information,
-+ apparatus, product, or process disclosed, or represents that its use
-+ would not infringe privately- owned rights. Reference herein to any
-+ specific commercial products, process, or service by trade name,
-+ trademark, manufacturer, or otherwise, does not necessarily constitute
-+ or imply its endorsement, recommendation, or favoring by the United
-+ States Government or the University of California. The views and
-+ opinions of authors expressed herein do not necessarily state or reflect
-+ those of the United States Government or the University of California,
-+ and shall not be used for advertising or product endorsement purposes.
-+-----------------------------------------------------------------------------
-+
-+
-diff -rupN hdf5-1.8.6/CTestConfig.cmake hdf5-1.8.6.patched/CTestConfig.cmake
---- hdf5-1.8.6/CTestConfig.cmake 1969-12-31 16:00:00.000000000 -0800
-+++ hdf5-1.8.6.patched/CTestConfig.cmake 2011-02-14 08:23:44.000000000 -0800
-@@ -0,0 +1,15 @@
-+## This file should be placed in the root directory of your project.
-+## Then modify the CMakeLists.txt file in the root directory of your
-+## project to incorporate the testing dashboard.
-+## # The following are required to uses Dart and the Cdash dashboard
-+## ENABLE_TESTING()
-+## INCLUDE(CTest)
-+set(CTEST_PROJECT_NAME "HDF5.1.8.6")
-+set(CTEST_NIGHTLY_START_TIME "20:00:00 CST")
-+
-+set(CTEST_DROP_METHOD "http")
-+set(CTEST_DROP_SITE "nei.hdfgroup.uiuc.edu")
-+set(CTEST_DROP_LOCATION "/cdash/submit.php?project=HDF5.1.8.6")
-+set(CTEST_DROP_SITE_CDASH TRUE)
-+
-+set(UPDATE_TYPE svn)
-diff -rupN hdf5-1.8.6/MANIFEST hdf5-1.8.6.patched/MANIFEST
---- hdf5-1.8.6/MANIFEST 1969-12-31 16:00:00.000000000 -0800
-+++ hdf5-1.8.6.patched/MANIFEST 2011-02-14 08:23:44.000000000 -0800
-@@ -0,0 +1,2363 @@
-+#
-+# Copyright by The HDF Group.
-+# Copyright by the Board of Trustees of the University of Illinois.
-+# All rights reserved.
-+#
-+# This file is part of HDF5. The full HDF5 copyright notice, including
-+# terms governing use, modification, and redistribution, is contained in
-+# the files COPYING and Copyright.html. COPYING can be found at the root
-+# of the source code distribution tree; Copyright.html can be found at the
-+# root level of an installed copy of the electronic HDF5 document set and
-+# is linked from the top-level documents page. It can also be found at
-+# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
-+# access to either file, you may request a copy from he...@hd....
-+#
-+#------------------------------------------------------------------------------
-+# This is the list of files that are part of HDF5 source distribution.
-+# All files have a `./' prefix and appear in lexicographic order.
-+# Lines that end with _DO_NOT_DISTRIBUTE_ will not be included in a
-+# release. Blank lines and comments are ignored. Comments must start
-+# in column one with a '#'.
-+#------------------------------------------------------------------------------
-+
-+./.autom4te.cfg _DO_NOT_DISTRIBUTE_
-+./.h5chkright.ini _DO_NOT_DISTRIBUTE_
-+./ACKNOWLEDGMENTS
-+./COPYING
-+./MANIFEST
-+./Makefile.dist
-+./Makefile.am
-+./Makefile.in
-+./README.txt
-+./aclocal.m4
-+./acsite.m4
-+./configure
-+./configure.in
-+
-+./bin/COPYING
-+./bin/buildhdf5
-+./bin/checkapi _DO_NOT_DISTRIBUTE_
-+./bin/checkposix _DO_NOT_DISTRIBUTE_
-+./bin/chkconfigure _DO_NOT_DISTRIBUTE_
-+./bin/chkcopyright _DO_NOT_DISTRIBUTE_
-+./bin/chkmanifest
-+./bin/compile
-+./bin/config.guess
-+./bin/config.sub
-+./bin/config_para_ibm_sp.sh
-+./bin/debug-ohdr _DO_NOT_DISTRIBUTE_
-+./bin/dependencies
-+./bin/depcomp
-+./bin/deploy
-+./bin/distdep
-+./bin/errors _DO_NOT_DISTRIBUTE_
-+./bin/gcov_script _DO_NOT_DISTRIBUTE_
-+./bin/h5vers
-+./bin/install-sh
-+./bin/iostats
-+./bin/locate_sw
-+./bin/ltmain.sh
-+./bin/make_err
-+./bin/make_overflow
-+./bin/make_vers
-+./bin/makehelp
-+./bin/missing
-+./bin/mkdirs
-+./bin/mkinstalldirs
-+./bin/newer
-+./bin/reconfigure _DO_NOT_DISTRIBUTE_
-+./bin/release
-+./bin/runtest _DO_NOT_DISTRIBUTE_
-+./bin/snapshot
-+./bin/snapshot_version _DO_NOT_DISTRIBUTE_
-+./bin/timekeeper _DO_NOT_DISTRIBUTE_
-+./bin/trace
-+./bin/yodconfigure
-+
-+./config/COPYING
-+./config/BlankForm
-+./config/apple
-+./config/commence.am
-+./config/conclude.am
-+./config/craynv
-+./config/dec-flags
-+./config/examples.am
-+./config/freebsd
-+./config/gnu-fflags
-+./config/gnu-flags
-+./config/hpux11.23
-+./config/i386-pc-cygwin32
-+./config/i686-pc-cygwin
-+./config/ia64-linux-gnu
-+./config/ibm-aix
-+./config/ibm-aix6.x
-+./config/ibm-flags
-+./config/intel-fflags
-+./config/intel-flags
-+./config/irix6.x
-+./config/linux-gnu
-+./config/linux-gnuaout
-+./config/linux-gnulibc1
-+./config/linux-gnulibc2
-+./config/lt_vers.am
-+./config/mpich
-+./config/nec-superux14.1
-+./config/Makefile.am.blank
-+./config/pgi-fflags
-+./config/pgi-flags
-+./config/powerpc-ibm-aix5.x
-+./config/solaris2.x
-+./config/sv1-cray
-+./config/x86_64-redstorm-linux-gnu
-+
-+./config/site-specific/BlankForm
-+
-+./examples/Attributes.txt
-+./examples/Makefile.am
-+./examples/Makefile.in
-+./examples/h5_chunk_read.c
-+./examples/h5_compound.c
-+./examples/h5_drivers.c
-+./examples/h5_dtransform.c
-+./examples/h5_elink_unix2win.c
-+./examples/h5_extend_write.c
-+./examples/h5_extlink.c
-+./examples/h5_group.c
-+./examples/h5_interm_group.c
-+./examples/h5_read.c
-+./examples/h5_write.c
-+./examples/h5_select.c
-+./examples/h5_attribute.c
-+./examples/h5_mount.c
-+./examples/h5_reference.c
-+./examples/h5_ref2reg.c
-+./examples/h5_shared_mesg.c
-+./examples/ph5example.c
-+./examples/testh5cc.sh.in
-+
-+
-+
-+#------------------------------------------------------------------------------
-+#
-+# Begin Fortran interface
-+#
-+#------------------------------------------------------------------------------
-+
-+./fortran/COPYING
-+./fortran/Makefile.am
-+./fortran/Makefile.in
-+
-+./fortran/examples/Makefile.am
-+./fortran/examples/Makefile.in
-+./fortran/examples/attrexample.f90
-+./fortran/examples/compound.f90
-+./fortran/examples/dsetexample.f90
-+./fortran/examples/fileexample.f90
-+./fortran/examples/groupexample.f90
-+./fortran/examples/grpdsetexample.f90
-+./fortran/examples/grpit.f90
-+./fortran/examples/grpsexample.f90
-+./fortran/examples/hyperslab.f90
-+./fortran/examples/mountexample.f90
-+./fortran/examples/ph5example.f90
-+./fortran/examples/refobjexample.f90
-+./fortran/examples/refregexample.f90
-+./fortran/examples/run-fortran-ex.sh.in
-+./fortran/examples/rwdsetexample.f90
-+./fortran/examples/selectele.f90
-+./fortran/examples/testh5fc.sh.in
-+
-+./fortran/src/H5_f.c
-+./fortran/src/H5_ff.f90
-+./fortran/src/H5_DBLE_InterfaceInclude.f90
-+./fortran/src/H5_DBLE_InterfaceExclude.f90
-+./fortran/src/H5Af.c
-+./fortran/src/H5Aff.f90
-+./fortran/src/H5Df.c
-+./fortran/src/H5Dff.f90
-+./fortran/src/H5Ef.c
-+./fortran/src/H5Eff.f90
-+./fortran/src/H5FDmpiof.c
-+./fortran/src/H5FDmpioff.f90
-+./fortran/src/H5Ff.c
-+./fortran/src/H5Fff.f90
-+./fortran/src/H5Gf.c
-+./fortran/src/H5Gff.f90
-+./fortran/src/H5If.c
-+./fortran/src/H5Iff.f90
-+./fortran/src/H5Lf.c
-+./fortran/src/H5Lff.f90
-+./fortran/src/H5Of.c
-+./fortran/src/H5Off.f90
-+./fortran/src/H5Pf.c
-+./fortran/src/H5Pff.f90
-+./fortran/src/H5Rf.c
-+./fortran/src/H5Rff.f90
-+./fortran/src/H5Sf.c
-+./fortran/src/H5Sff.f90
-+./fortran/src/H5Tf.c
-+./fortran/src/H5Tff.f90
-+./fortran/src/H5Zf.c
-+./fortran/src/H5Zff.f90
-+./fortran/src/H5f90.h
-+./fortran/src/H5f90global.f90
-+./fortran/src/H5f90i.h
-+./fortran/src/H5f90kit.c
-+./fortran/src/H5f90proto.h
-+./fortran/src/H5test_kind.f90
-+./fortran/src/H5test_kind_SIZEOF.f90
-+./fortran/src/H5match_types.c
-+./fortran/src/HDF5.f90
-+./fortran/src/HDF5mpio.f90
-+./fortran/src/Makefile.am
-+./fortran/src/Makefile.in
-+./fortran/src/README
-+./fortran/src/README_DEVELOPEMENT _DO_NOT_DISTRIBUTE_
-+./fortran/src/h5fc.in
-+./fortran/src/hdf5_fortrandll.def
-+
-+./fortran/test/Makefile.am
-+./fortran/test/Makefile.in
-+./fortran/test/fflush1.f90
-+./fortran/test/fflush2.f90
-+./fortran/test/fortranlib_test.f90
-+./fortran/test/fortranlib_test_1_8.f90
-+./fortran/test/t.c
-+./fortran/test/t.h
-+./fortran/test/tf.f90
-+./fortran/test/tH5A.f90
-+./fortran/test/tH5A_1_8.f90
-+./fortran/test/tH5D.f90
-+./fortran/test/tH5E.f90
-+./fortran/test/tH5F.f90
-+./fortran/test/tH5G.f90
-+./fortran/test/tH5G_1_8.f90
-+./fortran/test/tH5I.f90
-+./fortran/test/tH5O.f90
-+./fortran/test/tH5P.f90
-+./fortran/test/tH5R.f90
-+./fortran/test/tH5S.f90
-+./fortran/test/tH5Sselect.f90
-+./fortran/test/tH5T.f90
-+./fortran/test/tH5VL.f90
-+./fortran/test/tH5Z.f90
-+
-+./fortran/testpar/Makefile.am
-+./fortran/testpar/Makefile.in
-+./fortran/testpar/ptest.f90
-+./fortran/testpar/hyper.f90
-+./fortran/testpar/mdset.f90
-+
-+#------------------------------------------------------------------------------
-+#
-+# End Fortran interface
-+#
-+#------------------------------------------------------------------------------
-+
-+#------------------------------------------------------------------------------
-+#
-+# Begin C++ interface
-+#
-+#------------------------------------------------------------------------------
-+
-+./c++/COPYING
-+./c++/Makefile.am
-+./c++/Makefile.in
-+
-+./c++/examples/chunks.cpp
-+./c++/examples/compound.cpp
-+./c++/examples/create.cpp
-+./c++/examples/expected.out
-+./c++/examples/extend_ds.cpp
-+./c++/examples/h5group.cpp
-+./c++/examples/readdata.cpp
-+./c++/examples/testh5c++.sh.in
-+./c++/examples/writedata.cpp
-+./c++/examples/Makefile.am
-+./c++/examples/Makefile.in
-+./c++/examples/run-c++-ex.sh.in
-+
-+./c++/src/H5AbstractDs.cpp
-+./c++/src/H5AbstractDs.h
-+./c++/src/H5Alltypes.h
-+./c++/src/H5ArrayType.cpp
-+./c++/src/H5ArrayType.h
-+./c++/src/H5AtomType.cpp
-+./c++/src/H5AtomType.h
-+./c++/src/H5Attribute.cpp
-+./c++/src/H5Attribute.h
-+./c++/src/H5Classes.h
-+./c++/src/H5CommonFG.cpp
-+./c++/src/H5CommonFG.h
-+./c++/src/H5CompType.cpp
-+./c++/src/H5CompType.h
-+./c++/src/H5Cpp.h
-+./c++/src/H5CppDoc.h
-+./c++/src/H5DataSet.cpp
-+./c++/src/H5DataSet.h
-+./c++/src/H5DataSpace.cpp
-+./c++/src/H5DataSpace.h
-+./c++/src/H5DataType.cpp
-+./c++/src/H5DataType.h
-+./c++/src/H5DcreatProp.cpp
-+./c++/src/H5DcreatProp.h
-+./c++/src/H5DxferProp.cpp
-+./c++/src/H5DxferProp.h
-+./c++/src/H5EnumType.cpp
-+./c++/src/H5EnumType.h
-+./c++/src/H5Exception.cpp
-+./c++/src/H5Exception.h
-+./c++/src/H5FaccProp.cpp
-+./c++/src/H5FaccProp.h
-+./c++/src/H5FcreatProp.cpp
-+./c++/src/H5FcreatProp.h
-+./c++/src/H5File.cpp
-+./c++/src/H5File.h
-+./c++/src/H5FloatType.cpp
-+./c++/src/H5FloatType.h
-+./c++/src/H5Group.cpp
-+./c++/src/H5Group.h
-+./c++/src/H5IdComponent.cpp
-+./c++/src/H5IdComponent.h
-+./c++/src/H5Include.h
-+./c++/src/H5IntType.cpp
-+./c++/src/H5IntType.h
-+./c++/src/H5Library.cpp
-+./c++/src/H5Library.h
-+./c++/src/H5Object.cpp
-+./c++/src/H5Object.h
-+./c++/src/H5PredType.cpp
-+./c++/src/H5PredType.h
-+./c++/src/H5PropList.cpp
-+./c++/src/H5PropList.h
-+./c++/src/H5StrType.cpp
-+./c++/src/H5StrType.h
-+./c++/src/H5VarLenType.cpp
-+./c++/src/H5VarLenType.h
-+./c++/src/Makefile.am
-+./c++/src/Makefile.in
-+./c++/src/RM_stylesheet.css
-+./c++/src/cpp_doc_config
-+./c++/src/h5c++.in
-+./c++/src/header.html
-+./c++/src/header_files/filelist.xml
-+./c++/src/header_files/image001.jpg
-+./c++/src/header_files/image002.jpg
-+
-+./c++/test/H5srcdir_str.h.in
-+./c++/test/Makefile.am
-+./c++/test/Makefile.in
-+./c++/test/dsets.cpp
-+./c++/test/h5cpputil.cpp
-+./c++/test/h5cpputil.h
-+./c++/test/tattr.cpp
-+./c++/test/tcompound.cpp
-+./c++/test/testhdf5.cpp
-+./c++/test/tfile.cpp
-+./c++/test/tfilter.cpp
-+./c++/test/th5s.cpp
-+./c++/test/th5s.h5
-+./c++/test/tlinks.cpp
-+./c++/test/ttypes.cpp
-+./c++/test/trefer.cpp
-+./c++/test/tvlstr.cpp
-+
-+#------------------------------------------------------------------------------
-+#
-+# End C++ interface
-+#
-+#------------------------------------------------------------------------------
-+
-+./m4/ltsugar.m4 _DO_NOT_DISTRIBUTE_
-+./m4/libtool.m4 _DO_NOT_DISTRIBUTE_
-+./m4/ltversion.m4 _DO_NOT_DISTRIBUTE_
-+./m4/lt~obsolete.m4 _DO_NOT_DISTRIBUTE_
-+./m4/ltoptions.m4 _DO_NOT_DISTRIBUTE_
-+
-+./perform/COPYING
-+./perform/Makefile.am
-+./perform/Makefile.in
-+./perform/benchpar.c
-+./perform/build_h5...
[truncated message content] |