[Sashimi-commit] SF.net SVN: sashimi: [2987] trunk/trans_proteomic_pipeline/src/Search/ SpectraST/SpectraSTSearchParams.cpp

[<hen...@us...>]

Revision: 2987
          http://sashimi.svn.sourceforge.net/sashimi/?rev=2987&view=rev
Author:   henrylam
Date:     2008-03-26 11:24:37 -0700 (Wed, 26 Mar 2008)

Log Message:
-----------
Specify default for the search param indexCacheAll, previously left uninitialized

Modified Paths:
--------------
    trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSearchParams.cpp

Modified: trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSearchParams.cpp
===================================================================
--- trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSearchParams.cpp	2008-03-26 18:23:20 UTC (rev 2986)
+++ trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSearchParams.cpp	2008-03-26 18:24:37 UTC (rev 2987)
@@ -542,8 +542,10 @@
   
   // name of file containing all query to be searched (will skip all others)
   filterSelectedListFileName = "";
-  
-  
+
+  // whether or not to load the entire library in memory (faster but needs lots of RAM)
+  indexCacheAll = false;
+
   // CANDIDATE SELECTION AND SCORING
   
   // mass tolerance for index retrieval, i.e. 


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