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From: Wout B. <wou...@ua...> - 2023-11-28 21:37:40
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Dear colleagues, We have our next teleconference tomorrow, Wednesday November 29, at 16h00 CET (7h00 PST, 15h00 GMT, 17h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * CV: New term for contaminant identifications (issue 209<https://github.com/HUPO-PSI/psi-ms-CV/issues/209>). * Specification document<https://docs.google.com/document/d/132F3MBgDJgtFlXxDZhpJ1oHGbKL8pT6dk9fvL55L5_M/edit?usp=sharing>: Update on semantic validation & resubmit to document process. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: Update on analysis & results. * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit?usp=sharing> * AOB. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-11-14 18:22:08
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Dear colleagues, We have our next teleconference tomorrow, Wednesday November 15, at 16h00 CET (7h00 PST, 15h00 GMT, 17h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * CV: New term for contaminant identifications (issue 209<https://github.com/HUPO-PSI/psi-ms-CV/issues/209>). * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit> * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit?usp=sharing> * AOB. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-10-03 16:33:16
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Dear colleagues, We have our next teleconference tomorrow, Wednesday October 4, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: update QC metrics use case (Colab notebook<https://colab.research.google.com/drive/1yDZWUrJ4affgfpp8FG2MPGSktOeOiCs1>). * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit?usp=sharing>: status and planning. * CV: New term for contaminant identifications (issue 209<https://github.com/HUPO-PSI/psi-ms-CV/issues/209>). If applicable, please communicate additional agenda items to the mailing list. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-09-05 23:35:44
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Dear colleagues, We have our next teleconference tomorrow, Wednesday September 6, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * TDAuditor: Updates, CV term requests, and discussion (if applicable). * rmzqc: internal quotes in term decsriptions<https://github.com/MS-Quality-Hub/rmzqc/issues/21>. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: QC metrics update (Colab notebook<https://colab.research.google.com/drive/1yDZWUrJ4affgfpp8FG2MPGSktOeOiCs1>). * CV: New term for contaminant identifications (issue 209<https://github.com/HUPO-PSI/psi-ms-CV/issues/209>). If applicable, please communicate additional agenda items to the mailing list. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-08-22 16:02:53
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Dear colleagues, We have our next teleconference tomorrow, Wednesday August 23, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Agenda items: * CV: Interpretation of CV terms moved to comments (PR 212<https://github.com/HUPO-PSI/psi-ms-CV/pull/212>, contributed by tnaake). * CV: New term for contaminant identifications (issue 209<https://github.com/HUPO-PSI/psi-ms-CV/issues/209>). * TDAuditor: Updates, CV term requests, and discussion (if applicable). * mzQC validator: Update on online deployment. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: QC metrics from new MS files by Chris. If applicable, please communicate additional agenda items to the mailing list. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-08-08 11:21:36
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Dear colleagues, We have our next teleconference tomorrow, Wednesday August 9, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Agenda items: * CV: New MsQuality terms (PR 206<https://github.com/HUPO-PSI/psi-ms-CV/pull/206>). * CV: New term for contaminant identifications (issue 209<https://github.com/HUPO-PSI/psi-ms-CV/issues/209>). * CV: New terms for mzQC software tools examples (see Slack). * TDAuditor: Updates and discussion if necessary. * mzQC validator: Update on online deployment. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: Discuss QC metrics used to highlight library functionalities (see Slack). If applicable, please communicate additional agenda items to the mailing list. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-07-11 09:41:48
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Dear colleagues, We have our next teleconference tomorrow, Wednesday July 12, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Agenda items: * CV: CV terms for MsQuality<https://github.com/HUPO-PSI/psi-ms-CV/pull/206>. * CV: CV terms for top-down metrics. * mzQC software tools manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit?usp=sharing>: Finalize QC metrics use case. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-06-27 18:07:12
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Dear colleagues, We have our next teleconference tomorrow, Wednesday June 28, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Agenda items: * CV terms proposal for top-down metrics. * mzQC software tools manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit?usp=sharing>: Address Juan's comments & discuss longitudinal QC metrics use case. Best, Wout |
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From: Bielow, C. <Chr...@fu...> - 2023-06-14 06:22:32
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Hey guys, Im on vacation this week. Feel free to assign tasks. I will look into it next week. Have a good meeting! Best, Chris Am 13.06.2023 17:25 schrieb Wout Bittremieux <wou...@ua...>: Dear colleagues, We have our next teleconference tomorrow, Wednesday June 14, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Agenda items: * Working group charter: Please comment on the updated working group charter here<https://docs.google.com/document/d/1M9bQv2TKbqChqC4R0QOf1-Jo7iZiN3tRb03Gl09TZ0k/edit> before inclusion on the new PSI website. * CV terms for quality control in top-down proteomics proposed by Dave. * mzQC software tools manuscript: Discuss mzQC tools use case based on the updated mzQC files Mathias has shared on Slack. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-06-13 15:25:00
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Dear colleagues, We have our next teleconference tomorrow, Wednesday June 14, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Agenda items: * Working group charter: Please comment on the updated working group charter here<https://docs.google.com/document/d/1M9bQv2TKbqChqC4R0QOf1-Jo7iZiN3tRb03Gl09TZ0k/edit> before inclusion on the new PSI website. * CV terms for quality control in top-down proteomics proposed by Dave. * mzQC software tools manuscript: Discuss mzQC tools use case based on the updated mzQC files Mathias has shared on Slack. Best, Wout |
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From: R S. <r7...@gm...> - 2023-05-27 15:46:59
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Congratulations Wout, well deserved! Best Wishes, Reza ________________________________ From: ed <era...@gm...> Sent: Saturday, May 27, 2023 11:18:38 AM To: David TABB <dav...@pa...> Cc: ps...@eb... <ps...@eb...>; psi...@li... <psi...@li...> Subject: Re: [Psidev-qc-dev] Election Results: Wout Bittremieux new chair of QC! Congrats Wout and Dave! Best wishes for the new positions. On Thu, May 25, 2023 at 10:39 AM David TABB <dav...@pa...<mailto:dav...@pa...>> wrote: Hi, everyone. I am delighted to report that the QC Working Group has elected a new chair: Wout Bittremieux (wou...@ua...<mailto:wou...@ua...>). Wout is an assistant research profesor at the University of Antwerp. A founding member of the HUPO-PSI QC Working Group in 2016, he has played a key role in publications and the mzQC specification documentation resulting from this team, not to mention his enduring effort to ensure the group has regular recorded meetings. From the beginning, Wout has been essential personnel to the QC team. Dave Tabb will be retiring from the role of QC Working Group Chair, shifting to an informal role as "Chair Emeritus." Thank you so much for your willingness to take on this role, Wout! Dave _______________________________________________ Psidev-qc-dev mailing list Psi...@li...<mailto:Psi...@li...> https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev -- Eralp DOGU, PhD Assoc. Prof., Department of Statistics <http://www.linkedin.com/in/eralpdogu>Mugla Sitki Kocman University, Phone: +902522115446 era...@mu...<mailto:era...@mu...>, era...@gm...<mailto:era...@gm...> https://sites.google.com/site/eralpdogu/ |
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From: ed <era...@gm...> - 2023-05-27 10:18:57
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Congrats Wout and Dave! Best wishes for the new positions. On Thu, May 25, 2023 at 10:39 AM David TABB <dav...@pa...> wrote: > Hi, everyone. > > > I am delighted to report that the QC Working Group has elected a new > chair: * Wout Bittremieux* (wou...@ua...). Wout is an > assistant research profesor at the University of Antwerp. A founding > member of the HUPO-PSI QC Working Group in 2016, he has played a key role > in publications and the mzQC specification documentation resulting from > this team, not to mention his enduring effort to ensure the group has > regular recorded meetings. From the beginning, Wout has been essential > personnel to the QC team. > > > Dave Tabb will be retiring from the role of QC Working Group Chair, > shifting to an informal role as "Chair Emeritus." > > > Thank you so much for your willingness to take on this role, Wout! > > Dave > _______________________________________________ > Psidev-qc-dev mailing list > Psi...@li... > https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev > -- Eralp DOGU, PhD Assoc. Prof., Department of Statistics <http://www.linkedin.com/in/eralpdogu>Mugla Sitki Kocman University, Phone: +902522115446 era...@mu..., era...@gm... https://sites.google.com/site/eralpdogu/ |
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From: Julian U. <jul...@ru...> - 2023-05-26 07:39:35
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Hej, Also from my side: thanks to Dave for all his work and congrats to Wout. Best, Julian On 25.05.2023 19:06, Tenzer, Stefan wrote: > Congratulations Wout! > > Best wishes and hope to see you at ASMS! > > Stefan > > >> Am 25.05.2023 um 18:48 schrieb David Jimenez-Morales >> <dav...@st... >> <mailto:dav...@st...>>: >> >> Congratulations Wout! I am sure you'll do a fantastic job. >> >> And congratulations to Dave as well for the incredible job that he has >> done. >> >> Thanks >> David >> >> DAVID JIMENEZ-MORALES, PHD >> Bioinformatics Lead >> Stanford University School of Medicine >> Department of Medicine/Division of Cardiovascular Medicine >> Center for Academic Medicine >> 453 Quarry Road >> Palo Alto, CA 94304 >> http://web.stanford.edu/people/david.jimenez-morales >> <http://web.stanford.edu/people/david.jimenez-morales> >> >> *Confidentiality notice:*This communication and any attachments may >> contain confidential or privileged information for the use by the >> designated recipient(s) named above. If you are not the intended >> recipient, you are hereby notified that you have received this >> communication in error and that any review, disclosure, dissemination, >> distribution or copying of it or the attachments is strictly >> prohibited. If you have received this communication in error, please >> contact me and destroy all copies of the communication and >> attachments. Thank you. >> >> >> ------------------------------------------------------------------------ >> *From:*Eric Deutsch via Psidev-qc-dev >> <psi...@li... >> <mailto:psi...@li...>> >> *Sent:*Thursday, May 25, 2023 7:55 AM >> *To:*David TABB <dav...@pa... >> <mailto:dav...@pa...>>;ps...@eb... >> <mailto:ps...@eb...><ps...@eb... >> <mailto:ps...@eb...>>;psi...@li... >> <mailto:psi...@li...><psi...@li... <mailto:psi...@li...>> >> *Cc:*Eric Deutsch <ede...@sy... >> <mailto:ede...@sy...>> >> *Subject:*Re: [Psidev-qc-dev] [Psi-sc] Election Results: Wout >> Bittremieux new chair of QC! >> Excellent news! Thank you for your past and current contributions, >> Dave. And welcome to Wout! >> >> We should update the roles on the current and new web site. And email >> list. >> >> Regards, >> Eric >> >> *From:*Psi-sc <psi...@eb... >> <mailto:psi...@eb...>>*On Behalf Of*David TABB via Psi-sc >> *Sent:*Thursday, May 25, 2023 12:39 AM >> *To:*ps...@eb... >> <mailto:ps...@eb...>;psi...@li... >> <mailto:psi...@li...> >> *Cc:*Wout Bittremieux <wou...@ua... >> <mailto:wou...@ua...>> >> *Subject:*[Psi-sc] Election Results: Wout Bittremieux new chair of QC! >> >> Hi, everyone. >> >> I am delighted to report that the QC Working Group has elected a new >> chair:*/Wout Bittremieux/*(wou...@ua... >> <mailto:wou...@ua...>). Wout is an assistant >> research profesor at the University of Antwerp. A founding member of >> the HUPO-PSI QC Working Group in 2016, he has played a key role in >> publications and the mzQC specification documentation resulting from >> this team, not to mention his enduring effort to ensure the group has >> regular recorded meetings. From the beginning, Wout has been >> essential personnel to the QC team. >> >> Dave Tabb will be retiring from the role of QC Working Group Chair, >> shifting to an informal role as "Chair Emeritus." >> >> Thank you so much for your willingness to take on this role, Wout! >> Dave >> _______________________________________________ >> Psidev-qc-dev mailing list >> Psi...@li... >> <mailto:Psi...@li...> >> https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev >> <https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev> > > > > _______________________________________________ > Psidev-qc-dev mailing list > Psi...@li... > https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev |
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From: Tenzer, S. <te...@un...> - 2023-05-25 17:22:27
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Congratulations Wout! Best wishes and hope to see you at ASMS! Stefan Am 25.05.2023 um 18:48 schrieb David Jimenez-Morales <dav...@st...<mailto:dav...@st...>>: Congratulations Wout! I am sure you'll do a fantastic job. And congratulations to Dave as well for the incredible job that he has done. Thanks David DAVID JIMENEZ-MORALES, PHD Bioinformatics Lead Stanford University School of Medicine Department of Medicine/Division of Cardiovascular Medicine Center for Academic Medicine 453 Quarry Road Palo Alto, CA 94304 http://web.stanford.edu/people/david.jimenez-morales Confidentiality notice: This communication and any attachments may contain confidential or privileged information for the use by the designated recipient(s) named above. If you are not the intended recipient, you are hereby notified that you have received this communication in error and that any review, disclosure, dissemination, distribution or copying of it or the attachments is strictly prohibited. If you have received this communication in error, please contact me and destroy all copies of the communication and attachments. Thank you. ________________________________ From: Eric Deutsch via Psidev-qc-dev <psi...@li...<mailto:psi...@li...>> Sent: Thursday, May 25, 2023 7:55 AM To: David TABB <dav...@pa...<mailto:dav...@pa...>>; ps...@eb...<mailto:ps...@eb...> <ps...@eb...<mailto:ps...@eb...>>; psi...@li...<mailto:psi...@li...> <psi...@li...<mailto:psi...@li...>> Cc: Eric Deutsch <ede...@sy...<mailto:ede...@sy...>> Subject: Re: [Psidev-qc-dev] [Psi-sc] Election Results: Wout Bittremieux new chair of QC! Excellent news! Thank you for your past and current contributions, Dave. And welcome to Wout! We should update the roles on the current and new web site. And email list. Regards, Eric From: Psi-sc <psi...@eb...<mailto:psi...@eb...>> On Behalf Of David TABB via Psi-sc Sent: Thursday, May 25, 2023 12:39 AM To: ps...@eb...<mailto:ps...@eb...>; psi...@li...<mailto:psi...@li...> Cc: Wout Bittremieux <wou...@ua...<mailto:wou...@ua...>> Subject: [Psi-sc] Election Results: Wout Bittremieux new chair of QC! Hi, everyone. I am delighted to report that the QC Working Group has elected a new chair: Wout Bittremieux(wou...@ua...<mailto:wou...@ua...>). Wout is an assistant research profesor at the University of Antwerp. A founding member of the HUPO-PSI QC Working Group in 2016, he has played a key role in publications and the mzQC specification documentation resulting from this team, not to mention his enduring effort to ensure the group has regular recorded meetings. From the beginning, Wout has been essential personnel to the QC team. Dave Tabb will be retiring from the role of QC Working Group Chair, shifting to an informal role as "Chair Emeritus." Thank you so much for your willingness to take on this role, Wout! Dave _______________________________________________ Psidev-qc-dev mailing list Psi...@li...<mailto:Psi...@li...> https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev |
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From: David Jimenez-M. <dav...@st...> - 2023-05-25 16:49:05
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Congratulations Wout! I am sure you'll do a fantastic job. And congratulations to Dave as well for the incredible job that he has done. Thanks David DAVID JIMENEZ-MORALES, Phd Bioinformatics Lead Stanford University School of Medicine Department of Medicine/Division of Cardiovascular Medicine Center for Academic Medicine 453 Quarry Road Palo Alto, CA 94304 http://web.stanford.edu/people/david.jimenez-morales Confidentiality notice: This communication and any attachments may contain confidential or privileged information for the use by the designated recipient(s) named above. If you are not the intended recipient, you are hereby notified that you have received this communication in error and that any review, disclosure, dissemination, distribution or copying of it or the attachments is strictly prohibited. If you have received this communication in error, please contact me and destroy all copies of the communication and attachments. Thank you. ________________________________ From: Eric Deutsch via Psidev-qc-dev <psi...@li...> Sent: Thursday, May 25, 2023 7:55 AM To: David TABB <dav...@pa...>; ps...@eb... <ps...@eb...>; psi...@li... <psi...@li...> Cc: Eric Deutsch <ede...@sy...> Subject: Re: [Psidev-qc-dev] [Psi-sc] Election Results: Wout Bittremieux new chair of QC! Excellent news! Thank you for your past and current contributions, Dave. And welcome to Wout! We should update the roles on the current and new web site. And email list. Regards, Eric From: Psi-sc <psi...@eb...<mailto:psi...@eb...>> On Behalf Of David TABB via Psi-sc Sent: Thursday, May 25, 2023 12:39 AM To: ps...@eb...<mailto:ps...@eb...>; psi...@li...<mailto:psi...@li...> Cc: Wout Bittremieux <wou...@ua...<mailto:wou...@ua...>> Subject: [Psi-sc] Election Results: Wout Bittremieux new chair of QC! Hi, everyone. I am delighted to report that the QC Working Group has elected a new chair: Wout Bittremieux (wou...@ua...<mailto:wou...@ua...>). Wout is an assistant research profesor at the University of Antwerp. A founding member of the HUPO-PSI QC Working Group in 2016, he has played a key role in publications and the mzQC specification documentation resulting from this team, not to mention his enduring effort to ensure the group has regular recorded meetings. From the beginning, Wout has been essential personnel to the QC team. Dave Tabb will be retiring from the role of QC Working Group Chair, shifting to an informal role as "Chair Emeritus." Thank you so much for your willingness to take on this role, Wout! Dave |
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From: Eric D. <eri...@is...> - 2023-05-25 15:21:33
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Excellent news! Thank you for your past and current contributions, Dave. And welcome to Wout! We should update the roles on the current and new web site. And email list. Regards, Eric *From:* Psi-sc <psi...@eb...> *On Behalf Of *David TABB via Psi-sc *Sent:* Thursday, May 25, 2023 12:39 AM *To:* ps...@eb...; psi...@li... *Cc:* Wout Bittremieux <wou...@ua...> *Subject:* [Psi-sc] Election Results: Wout Bittremieux new chair of QC! Hi, everyone. I am delighted to report that the QC Working Group has elected a new chair: *Wout Bittremieux* (wou...@ua...). Wout is an assistant research profesor at the University of Antwerp. A founding member of the HUPO-PSI QC Working Group in 2016, he has played a key role in publications and the mzQC specification documentation resulting from this team, not to mention his enduring effort to ensure the group has regular recorded meetings. From the beginning, Wout has been essential personnel to the QC team. Dave Tabb will be retiring from the role of QC Working Group Chair, shifting to an informal role as "Chair Emeritus." Thank you so much for your willingness to take on this role, Wout! Dave |
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From: David T. <dav...@pa...> - 2023-05-25 07:39:34
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Hi, everyone. I am delighted to report that the QC Working Group has elected a new chair: Wout Bittremieux (wou...@ua...). Wout is an assistant research profesor at the University of Antwerp. A founding member of the HUPO-PSI QC Working Group in 2016, he has played a key role in publications and the mzQC specification documentation resulting from this team, not to mention his enduring effort to ensure the group has regular recorded meetings. From the beginning, Wout has been essential personnel to the QC team. Dave Tabb will be retiring from the role of QC Working Group Chair, shifting to an informal role as "Chair Emeritus." Thank you so much for your willingness to take on this role, Wout! Dave |
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From: David T. <dav...@pa...> - 2023-05-25 06:45:33
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Hi, all. I apologize for missing the meeting yesterday. When I returned home from the office, I learned that Natasha had become quite ill. While I'd recalled our working group meeting earlier in the day, it fell completely out of my mind until I was preparing for bed. Wout, I hope that the election went smoothly. I believe you will be an excellent leader for the team-- because you already have been a brilliant leader for the team! Thanks, Dave ________________________________ From: Wout Bittremieux <wou...@ua...> Sent: Tuesday, May 23, 2023 4:47:05 PM To: psi...@li... Subject: [Psidev-qc-dev] Upcoming teleconference 24/05 Dear colleagues, We have our next teleconference tomorrow, Wednesday May 24, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Zoom through the following link: https://uchealth.zoom.us/j/92419363577?pwd=WVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09 (Password: 012575) Agenda items: * Working group chair election. Currently we have one candidate: Wout Bittremieux. You can vote electronically prior to the teleconference here<https://urldefense.com/v3/__https://forms.gle/e9q6mxeRU8h2QL8N9__;!!JFdNOqOXpB6UZW0!vUaiCmkJmcPiwLslqljVkHBHvbbd_kXxl2EexSqHoiylCRbPdnepm8ISagu_pWSU9zXig86T4l0OIFCrXFEnRn6ECFUGZTGd$>, or during the meeting. * mzQC software tools manuscript<https://urldefense.com/v3/__https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit__;!!JFdNOqOXpB6UZW0!vUaiCmkJmcPiwLslqljVkHBHvbbd_kXxl2EexSqHoiylCRbPdnepm8ISagu_pWSU9zXig86T4l0OIFCrXFEnRn6ECKd2OTyR$>: Discuss updated analyses. * mzQC specification manuscript<https://urldefense.com/v3/__https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit__;!!JFdNOqOXpB6UZW0!vUaiCmkJmcPiwLslqljVkHBHvbbd_kXxl2EexSqHoiylCRbPdnepm8ISagu_pWSU9zXig86T4l0OIFCrXFEnRn6ECKvMRufC$>: Task division and planning. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-05-25 06:33:37
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Hi Dave, all, No problem. Hopefully Natasha recovers smoothly. You can find yesterday's meeting notes here<https://github.com/HUPO-PSI/mzQC/blob/main/meeting_notes/2023/20230524_telco.md>. The results from the election were pretty conclusive. 🙂 We discussed that it is up to you to decide when you want to make the change official and communicate this to the PSI Steering Committee. Due to ASMS, our next teleconference will be next week, May 31, 2023, and using Microsoft Teams (instead of Zoom). Best, Wout ________________________________ From: David TABB <dav...@pa...> Sent: Thursday, May 25, 2023 08:18 To: Wout Bittremieux <wou...@ua...>; psi...@li... <psi...@li...> Subject: Re: Upcoming teleconference 24/05 CAUTION: This email originated from outside of the organization. Do not click links or open attachments unless you recognize the sender and know the content is safe. Hi, all. I apologize for missing the meeting yesterday. When I returned home from the office, I learned that Natasha had become quite ill. While I'd recalled our working group meeting earlier in the day, it fell completely out of my mind until I was preparing for bed. Wout, I hope that the election went smoothly. I believe you will be an excellent leader for the team-- because you already have been a brilliant leader for the team! Thanks, Dave ________________________________ From: Wout Bittremieux <wou...@ua...> Sent: Tuesday, May 23, 2023 4:47:05 PM To: psi...@li... Subject: [Psidev-qc-dev] Upcoming teleconference 24/05 Dear colleagues, We have our next teleconference tomorrow, Wednesday May 24, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Zoom through the following link: https://uchealth.zoom.us/j/92419363577?pwd=WVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09 (Password: 012575) Agenda items: * Working group chair election. Currently we have one candidate: Wout Bittremieux. You can vote electronically prior to the teleconference here<https://urldefense.com/v3/__https://forms.gle/e9q6mxeRU8h2QL8N9__;!!JFdNOqOXpB6UZW0!vUaiCmkJmcPiwLslqljVkHBHvbbd_kXxl2EexSqHoiylCRbPdnepm8ISagu_pWSU9zXig86T4l0OIFCrXFEnRn6ECFUGZTGd$>, or during the meeting. * mzQC software tools manuscript<https://urldefense.com/v3/__https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit__;!!JFdNOqOXpB6UZW0!vUaiCmkJmcPiwLslqljVkHBHvbbd_kXxl2EexSqHoiylCRbPdnepm8ISagu_pWSU9zXig86T4l0OIFCrXFEnRn6ECKd2OTyR$>: Discuss updated analyses. * mzQC specification manuscript<https://urldefense.com/v3/__https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit__;!!JFdNOqOXpB6UZW0!vUaiCmkJmcPiwLslqljVkHBHvbbd_kXxl2EexSqHoiylCRbPdnepm8ISagu_pWSU9zXig86T4l0OIFCrXFEnRn6ECKvMRufC$>: Task division and planning. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-05-23 16:23:17
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Dear colleagues, We have our next teleconference tomorrow, Wednesday May 24, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Zoom through the following link: https://uchealth.zoom.us/j/92419363577?pwd=WVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09 (Password: 012575) Agenda items: * Working group chair election. Currently we have one candidate: Wout Bittremieux. You can vote electronically prior to the teleconference here<https://forms.gle/e9q6mxeRU8h2QL8N9>, or during the meeting. * mzQC software tools manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: Discuss updated analyses. * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: Task division and planning. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-05-15 16:00:59
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Dear colleagues, As discussed during our previous meetings, Dave has indicated that he will step down as working group chair. First of all, I think I speak for all of us in extending our heartfelt thanks for expertly guiding the group over the past years. This also means that we need to elect a new WG chair. As discussed last time, currently the nominations for WG chair are: * Mathias Walzer has nominated Wout Bittremieux. Wout has accepted the nomination. * Dave Tabb has nominated Mathias Walzer. Mathias has declined the nomination. There is now an opportunity to submit your candidacy for WG chair or nominate alternative candidates. Please do so by Monday May 22, 2023 by replying to this email. We will elect a new WG chair during our upcoming teleconference next week on Wednesday May 24, 2023 or via online ballot for people who are unable to join the meeting. Thank you, Wout |
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From: Wout B. <wou...@ua...> - 2023-04-25 18:32:33
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Dear colleagues, We have our next teleconference tomorrow, Wednesday April 26, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Zoom through the following link: https://uchealth.zoom.us/j/92419363577?pwd=WVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09 (Password: 012575) Agenda items: * Revisit working group roles<https://psidev.info/groups/quality-control#QC_group_structure>: new (co-)chair? * Update working group charter<https://psidev.info/quality-control-working-group-charter> with future goals. * Discuss mzQC software tools<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit> manuscript after Wout's recent editing pass. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-04-16 17:39:57
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Dear colleagues, This is a last-minute reminder that this week the PSI Spring Meeting<https://psidev.info/hupo-psi-meeting-2023> is taking place from Monday April 17 to Wednesday April 19. This is a hybrid meeting, so even if you will not be present in Leiden or haven't signed up yet, just reply to this email or send a message on Slack to receive the Zoom information. This is the schedule for the QC working group: Monday, April 17 * 9:00–18:30: Joint MS / PI / QC / MOD session. Tuesday, April 18 * 9:00–12:30: Lipidomics Standards Initiative (Gerhard Liebisch & Nils Hoffmann). * 14:30–15:45: Polish GitHub repository (address open issues, check examples for completeness and consistency, update documentation). * 16:00–18:30: Software library round-up and finalize manuscript. (Invite David Wednesday, April 19 * 9:00–10:30: mzQC format manuscript & develop the use cases. * 11:00–12:30: Discuss the future of QC working group. * 14:30–18:30: Common session. Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-03-31 14:21:57
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Dear colleagues, A few important updates from our teleconference this week (meeting notes<https://github.com/HUPO-PSI/mzQC/blob/main/meeting_notes/2023/20230329_telco.md>): 1. This is the proposed schedule for the QC working group during the PSI Spring Meeting: Monday, April 17 * 9:00–18:30: Joint MS / PI / QC / MOD session. Tuesday, April 18 * 9:00–12:30: Lipidomics Standards Initiative (Gerhard Liebisch & Nils Hoffmann). * 14:30–15:45: Polish GitHub repository (address open issues, check examples for completeness and consistency, update documentation). * 16:00–18:30: Software library round-up and finalize manuscript. (Invite David J. to join.) Dave has teaching engagements today and will only be available to a limited extent. Wednesday, April 19 * 9:00–10:30: mzQC format manuscript & develop the use cases. * 11:00–12:30: Discuss the future of QC working group. * 14:30–18:30: Common session. 2. This was the final teleconference before the PSI Spring Meeting! Due to the Easter break, we will skip our teleconference the next two weeks. See you all in Leiden/online in April! Preparation for the Spring Meeting will be conducted asynchronously via Slack and email. Best, Wout ________________________________ From: Wout Bittremieux <wou...@ua...> Sent: Wednesday, March 29, 2023 11:48 To: psi...@li... <psi...@li...> Subject: Upcoming teleconference 29/03 (today!) Dear colleagues, We have our next teleconference today, Wednesday March 29, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Zoom through the following link: https://uchealth.zoom.us/j/92419363577?pwd=WVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09 (Password: 012575) Agenda items: * PSI Spring Meeting<https://psidev.info/hupo-psi-meeting-2023> * April 17-19 in Leiden, the Netherlands. * Draft agenda<https://docs.google.com/spreadsheets/d/1J4ui2ILZvSMasix0xuZ5qUAOMDbgKsebnt6gqVHY1oA/edit#gid=1021763599>; compile QC schedule. * CV: proposal for new CV terms (see Slack). * Manuscripts: mzQC software tools<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit> (and mzQC format manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit?usp=sharing>). Best, Wout |
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From: Wout B. <wou...@ua...> - 2023-03-29 11:21:43
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Dear colleagues, We have our next teleconference today, Wednesday March 29, at 16h00 CEST (7h00 PDT, 14h00 GMT, 15h00 BST, 16h00 SAST). You can connect to our teleconference on Zoom through the following link: https://uchealth.zoom.us/j/92419363577?pwd=WVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09 (Password: 012575) Agenda items: * PSI Spring Meeting<https://psidev.info/hupo-psi-meeting-2023> * April 17-19 in Leiden, the Netherlands. * Draft agenda<https://docs.google.com/spreadsheets/d/1J4ui2ILZvSMasix0xuZ5qUAOMDbgKsebnt6gqVHY1oA/edit#gid=1021763599>; compile QC schedule. * CV: proposal for new CV terms (see Slack). * Manuscripts: mzQC software tools<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit> (and mzQC format manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit?usp=sharing>). Best, Wout |
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