Menu
▾
▴
psidev-qc-dev — PSI-QC working group mailinglist
You can subscribe to this list here.
| 2016 |
Jan
|
Feb
|
Mar
|
Apr
|
May
(11) |
Jun
(14) |
Jul
|
Aug
(11) |
Sep
|
Oct
(4) |
Nov
(15) |
Dec
(1) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2017 |
Jan
(1) |
Feb
(9) |
Mar
(2) |
Apr
(2) |
May
(6) |
Jun
(7) |
Jul
(10) |
Aug
(4) |
Sep
(15) |
Oct
(9) |
Nov
(5) |
Dec
(7) |
| 2018 |
Jan
(5) |
Feb
(7) |
Mar
(3) |
Apr
(15) |
May
(5) |
Jun
(4) |
Jul
(4) |
Aug
(2) |
Sep
(4) |
Oct
(8) |
Nov
(6) |
Dec
(7) |
| 2019 |
Jan
(7) |
Feb
(2) |
Mar
(4) |
Apr
(7) |
May
(5) |
Jun
(6) |
Jul
(11) |
Aug
(5) |
Sep
(4) |
Oct
(7) |
Nov
(3) |
Dec
(4) |
| 2020 |
Jan
(5) |
Feb
(5) |
Mar
(8) |
Apr
(3) |
May
(5) |
Jun
(3) |
Jul
(9) |
Aug
(2) |
Sep
(2) |
Oct
(3) |
Nov
(5) |
Dec
(4) |
| 2021 |
Jan
(3) |
Feb
(4) |
Mar
(2) |
Apr
(4) |
May
(5) |
Jun
(9) |
Jul
(4) |
Aug
(8) |
Sep
(5) |
Oct
(3) |
Nov
(2) |
Dec
(2) |
| 2022 |
Jan
(2) |
Feb
(2) |
Mar
(3) |
Apr
(3) |
May
(4) |
Jun
(5) |
Jul
(5) |
Aug
(4) |
Sep
(6) |
Oct
(2) |
Nov
(5) |
Dec
|
| 2023 |
Jan
(7) |
Feb
(5) |
Mar
(5) |
Apr
(2) |
May
(11) |
Jun
(3) |
Jul
(1) |
Aug
(2) |
Sep
(1) |
Oct
(1) |
Nov
(2) |
Dec
(2) |
| 2024 |
Jan
(2) |
Feb
(3) |
Mar
|
Apr
(2) |
May
(2) |
Jun
(5) |
Jul
(6) |
Aug
(2) |
Sep
(1) |
Oct
(7) |
Nov
(3) |
Dec
(1) |
| 2025 |
Jan
(3) |
Feb
(2) |
Mar
(1) |
Apr
(2) |
May
(2) |
Jun
(1) |
Jul
(3) |
Aug
|
Sep
|
Oct
|
Nov
|
Dec
|
|
From: Wout B. <wou...@ua...> - 2024-09-02 20:54:44
|
Dear colleagues, We have our next teleconference Wednesday September 4, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: review of previous and upcoming updates * pymzqc: validator improvements * mzQC support in tools: progress update * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: progress update * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2024-08-20 19:58:41
|
Dear colleagues, We have our next teleconference tomorrow, Wednesday August 21, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: @everyone review the updated website content prior to the meeting (#234<https://github.com/HUPO-PSI/mzQC/pull/234>) * pymzqc: validator improvements * mzQC support in tools: progress update * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: progress update * AOB. Best, Wout |
|
From: Eralp D. <era...@gm...> - 2024-07-24 12:42:37
|
Hi all, I won't be able to join you today due to a conflicting meeting. @Mathias i will send a reply today. I wanted to have Olga's opinion about the implementation. I will see her today and will let you know. Thanks, Eralp On Tue, Jul 23, 2024, 10:06 Wout Bittremieux <wou...@ua...> wrote: > Dear colleagues, > > We have our next teleconference tomorrow, Wednesday July 24, at 16h00 CET > (7h00 PST, 15h00 BST, 14h00 GMT). > > You can connect to our teleconference on Microsoft Teams through the > following link: > https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d > Meeting ID: 311 403 481 845 > Passcode: Jm4d4s > > Agenda items: > > - CV: STATO incompatibility (#296 > <https://github.com/HUPO-PSI/psi-ms-CV/pull/296>, #299 > <https://github.com/HUPO-PSI/psi-ms-CV/pull/299>) > - pymzqc: validator improvements (#42 > <https://github.com/MS-Quality-Hub/pymzqc/issues/42>, #43 > <https://github.com/MS-Quality-Hub/pymzqc/issues/43>) > - mzQC website <https://hupo-psi.github.io/mzQC/>: update > documentation and examples (#225 > <https://github.com/HUPO-PSI/mzQC/issues/225> and corresponding PRs) > - GitHub: Review active and stale PRs > - mzQC support in tools: progress update > - mzQC specification manuscript > <https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: > progress update > - AOB. > > > Best, > Wout > _______________________________________________ > Psidev-qc-dev mailing list > Psi...@li... > https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev > |
|
From: Wout B. <wou...@ua...> - 2024-07-23 14:05:58
|
Dear colleagues, We have our next teleconference tomorrow, Wednesday July 24, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * CV: STATO incompatibility (#296<https://github.com/HUPO-PSI/psi-ms-CV/pull/296>, #299<https://github.com/HUPO-PSI/psi-ms-CV/pull/299>) * pymzqc: validator improvements (#42<https://github.com/MS-Quality-Hub/pymzqc/issues/42>, #43<https://github.com/MS-Quality-Hub/pymzqc/issues/43>) * mzQC website<https://hupo-psi.github.io/mzQC/>: update documentation and examples (#225<https://github.com/HUPO-PSI/mzQC/issues/225> and corresponding PRs) * GitHub: Review active and stale PRs * mzQC support in tools: progress update * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: progress update * AOB. Best, Wout |
|
From: Eralp D. <era...@gm...> - 2024-07-09 18:25:43
|
Hi all, I am planning to join to see how I can contribute to the longitudinal QC part. Thanks, Eralp On Tue, Jul 9, 2024 at 12:16 PM Wout Bittremieux < wou...@ua...> wrote: > Dear colleagues, > > We have our next teleconference tomorrow, Wednesday July 10, at 16h00 CET > (7h00 PST, 15h00 BST, 14h00 GMT). > > You can connect to our teleconference on Microsoft Teams through the > following link: > https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d > Meeting ID: 311 403 481 845 > Passcode: Jm4d4s > > Agenda items: > > - mzQC website <https://hupo-psi.github.io/mzQC/>: update > documentation and examples (#225 > <https://github.com/HUPO-PSI/mzQC/issues/225> and corresponding PRs) > - mzQC support in tools: progress > - mzQC specification manuscript > <https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: > use cases > - AOB. > > > Best, > Wout > _______________________________________________ > Psidev-qc-dev mailing list > Psi...@li... > https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev > -- Eralp DOGU, PhD Assoc. Prof., Department of Statistics <http://www.linkedin.com/in/eralpdogu>Mugla Sitki Kocman University, Phone: +902522115446 era...@mu..., era...@gm... https://sites.google.com/site/eralpdogu/ |
|
From: Nils H. <nil...@ce...> - 2024-07-09 18:09:42
|
Hi, same here, Best wishes Nils Am 09.07.24 um 19:49 schrieb Tim Van Den Bossche via Psidev-qc-dev: > Hi everyone, > > I cannot make it tomorrow due to an overlapping RdA meeting. > > All the best, > Tim > > --- > Tim Van Den Bossche, FWO Postdoctoral Scientist > Member Board of Governors, Ghent University > > Computational Omics and Systems Biology Group (CompOmics) > Department of Biomolecular Medicine, Ghent University, Ghent, Belgium > VIB - UGent Center for Medical Biotechnology > ------------------------------------------------------------------------ > *Van:* Wout Bittremieux <wou...@ua...> > *Verzonden:* dinsdag 9 juli 2024 16:42 > *Aan:* psi...@li... > <psi...@li...> > *Onderwerp:* [Psidev-qc-dev] Upcoming teleconference July 10 > Dear colleagues, > > We have our next teleconference tomorrow, Wednesday July 10, at 16h00 > CET (7h00 PST, 15h00 BST, 14h00 GMT). > > You can connect to our teleconference on Microsoft Teams through the > following link: > https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d > <https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d> > Meeting ID: 311 403 481 845 > Passcode: Jm4d4s > > Agenda items: > > * > mzQC website <https://hupo-psi.github.io/mzQC/>: update > documentation and examples (#225 > <https://github.com/HUPO-PSI/mzQC/issues/225> and corresponding PRs) > * > mzQC support in tools: progress > * > mzQC specification manuscript > <https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: > use cases > * > AOB. > > > Best, > Wout > > > _______________________________________________ > Psidev-qc-dev mailing list > Psi...@li... > https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev -- Dr. Nils Hoffmann Cloud and Interoperability Platform Coordinator - ELIXIR-DE de.NBI - Deutsches Netzwerk für Bioinformatik-Infrastruktur Institut für Bio- und Geowissenschaften Computergestützte Metagenomik (IBG-5) Forschungszentrum Jülich GmbH c/o Centrum für Biotechnologie (CeBiTec) Universität Bielefeld Universitätsstraße 27 D-33615 Bielefeld Room: Main Building M3-125 Tel: +49(0)521-106-86780 E-Mail:n.h...@fz... E-Mail:co...@de... www.denbi.de elixir-europe.org --------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------- Forschungszentrum Jülich GmbH 52425 Jülich Sitz der Gesellschaft: Jülich Eingetragen im Handelsregister des Amtsgerichts Düren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Stefan Müller Geschäftsführung: Prof. Dr. Astrid Lambrecht (Vorsitzende), Karsten Beneke (stellv. Vorsitzender), Prof. Dr. Ir. Pieter Jansens --------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------- |
|
From: Tim V. D. B. <Tim...@UG...> - 2024-07-09 18:04:13
|
Hi everyone, I cannot make it tomorrow due to an overlapping RdA meeting. All the best, Tim --- Tim Van Den Bossche, FWO Postdoctoral Scientist Member Board of Governors, Ghent University Computational Omics and Systems Biology Group (CompOmics) Department of Biomolecular Medicine, Ghent University, Ghent, Belgium VIB - UGent Center for Medical Biotechnology ________________________________ Van: Wout Bittremieux <wou...@ua...> Verzonden: dinsdag 9 juli 2024 16:42 Aan: psi...@li... <psi...@li...> Onderwerp: [Psidev-qc-dev] Upcoming teleconference July 10 Dear colleagues, We have our next teleconference tomorrow, Wednesday July 10, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: update documentation and examples (#225<https://github.com/HUPO-PSI/mzQC/issues/225> and corresponding PRs) * mzQC support in tools: progress * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: use cases * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2024-07-09 16:16:11
|
Dear colleagues, We have our next teleconference tomorrow, Wednesday July 10, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: update documentation and examples (#225<https://github.com/HUPO-PSI/mzQC/issues/225> and corresponding PRs) * mzQC support in tools: progress * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: use cases * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2024-06-26 09:21:29
|
Dear colleagues, We have our next teleconference today, Wednesday June 26, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: update documentation and examples (#225<https://github.com/HUPO-PSI/mzQC/issues/225>) * mzQC support in tools: overview and planning * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: planning * AOB. Best, Wout |
|
From: Tim V. D. B. <Tim...@UG...> - 2024-06-12 07:28:53
|
Hi everyone, I have an overlapping meeting, so cannot attend today. Congratulations on the manuscript! Best, Tim Sent from my mobile phone, please excuse brevity. ________________________________ From: Nils Hoffmann <nil...@ce...> Sent: Tuesday, June 11, 2024 10:58:03 PM To: Bielow, Chris <Chr...@fu...> Cc: psi...@li... <psi...@li...> Subject: Re: [Psidev-qc-dev] Upcoming teleconference June 12 Congratulations! I will also be absent tomorrow. Greetings from Magnus, Veit and Samuel from the ELIXIR AllHands Meeting in Uppsala in Sweden. Cheers Nils Am 11.06.2024 um 21:45 schrieb Bielow, Chris <Chr...@fu...>: Dear all, Im currently on vacation and will abstain tomorrow. On another note: good news. Our paper got accepted today! Cheers Chris Am 11.06.2024 21:53 schrieb Wout Bittremieux <wou...@ua...>: Dear colleagues, We have our next teleconference tomorrow, Wednesday June 12th, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: update documentation and examples * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: planning * AOB. Best, Wout _______________________________________________ Psidev-qc-dev mailing list Psi...@li... https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev |
|
From: Nils H. <nil...@ce...> - 2024-06-11 21:13:57
|
<html><head><meta http-equiv="content-type" content="text/html; charset=utf-8"></head><body dir="auto"><div dir="ltr"></div><div dir="ltr">Congratulations!</div><div dir="ltr"><br></div><div dir="ltr">I will also be absent tomorrow.</div><div dir="ltr">Greetings from Magnus, Veit and Samuel from the ELIXIR AllHands Meeting in Uppsala in Sweden.</div><div dir="ltr"><br></div><div dir="ltr">Cheers</div><div dir="ltr">Nils</div><div dir="ltr"><br><blockquote type="cite">Am 11.06.2024 um 21:45 schrieb Bielow, Chris <Chr...@fu...>:<br><br></blockquote></div><blockquote type="cite"><div dir="ltr"> <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"> <meta content="text/html; charset=iso-8859-1"> <div dir="auto">Dear all, <div dir="auto">Im currently on vacation and will abstain tomorrow. </div> <div dir="auto"><br> </div> <div dir="auto">On another note: good news. Our paper got accepted today! </div> <div dir="auto"><br> </div> <div dir="auto">Cheers Chris </div> </div> <div class="gmail_extra"><br> <div class="gmail_quote">Am 11.06.2024 21:53 schrieb Wout Bittremieux <wou...@ua...>:<br type="attribution"> </div> </div> <div> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> Dear colleagues,</div> <div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <br> </div> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> We have our next teleconference tomorrow, Wednesday June 12th, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT).</div> <div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <br> </div> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> You can connect to our teleconference on Microsoft Teams through the following link: <a href="https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d" id="OWA750d9e35-7ed7-a626-74a2-1979a4335ecc" class="OWAAutoLink"> https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d</a></div> <div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> Meeting ID: 311 403 481 845</div> <div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> Passcode: Jm4d4s</div> <div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <br> </div> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> Agenda items:</div> <ul> <li style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <a href="https://hupo-psi.github.io/mzQC/" id="OWA53c7984a-3d49-4702-91e5-48534828096e" class="OWAAutoLink" title="https://hupo-psi.github.io/mzQC/">mzQC website</a>: update documentation and examples</div> </li><li style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <a href="https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit" id="OWA3d10afb5-0c2e-7d2e-ccff-f6ed4bdd20e7" class="OWAAutoLink" title="https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit">mzQC specification manuscript</a>: planning</div> </li><li style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> AOB.</div> </li></ul> <div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> <br> </div> <div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> Best,</div> <div class="elementToProof" style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)"> Wout</div> </div> <span>_______________________________________________</span><br><span>Psidev-qc-dev mailing list</span><br><span>Psi...@li...</span><br><span>https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev</span><br></div></blockquote></body></html> |
|
From: Bielow, C. <Chr...@fu...> - 2024-06-11 19:45:16
|
Dear all, Im currently on vacation and will abstain tomorrow. On another note: good news. Our paper got accepted today! Cheers Chris Am 11.06.2024 21:53 schrieb Wout Bittremieux <wou...@ua...>: Dear colleagues, We have our next teleconference tomorrow, Wednesday June 12th, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: update documentation and examples * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: planning * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2024-06-11 18:53:19
|
Dear colleagues, We have our next teleconference tomorrow, Wednesday June 12th, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * mzQC website<https://hupo-psi.github.io/mzQC/>: update documentation and examples * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit>: planning * AOB. Best, Wout |
|
From: Bielow, C. <Chr...@fu...> - 2024-05-29 13:59:29
|
Dear colleagues, We have our next teleconference tomorrow, Wednesday May 29th, at 16h00 CET (7h00 PST, 15h00 BST, 14h00 GMT). Please use the following link to join: (Attention: Webex may require some time to start up) https://fu-berlin.webex.com/fu-berlin-en/j.php?MTID=m47d282d50d2e8e82630032e 746e2df27 Agenda items: * mzQC software libraries manuscript: revision ( <https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieG T2Js/edit> manuscript & <https://docs.google.com/document/d/1XDByyTl_ftbuPQ9lxlW_7PAGqrsHGf-G8esbaiR 7vLw/edit?usp=sharing> response to reviewers) cheers Chris -- Dr. Chris Bielow Bioinformatics Solution Center (BSC) www.bsc.fu-berlin.de Freie Universität Berlin, Institut für Informatik, Takustr. 9, room K21, 14195 Berlin Phone: +49 (0)30 838-63084, Email: Chris.Bielow(at)bsc.fu-berlin.de |
|
From: Wout B. <wou...@ua...> - 2024-04-17 09:23:49
|
Dear colleagues, We have our next teleconference today, Wednesday April 17th, at 15h00 CET (6h00 PST, 14h00 BST, 13h00 GMT). Note that this is one hour earlier than our usual meeting time! You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d Meeting ID: 311 403 481 845 Passcode: Jm4d4s Agenda items: * Working group charter<https://www.psidev.info/quality-control-working-group-charter>: revise for the upcoming year * CV requests: precursor ppm (#254<https://github.com/HUPO-PSI/psi-ms-CV/pull/254>), missed cleavages & identified RT quarters (#255<https://github.com/HUPO-PSI/psi-ms-CV/pull/255>) * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit#heading=h.2vumqqn1kasd>: finalize * mzQC documentation and examples<https://hupo-psi.github.io/mzQC/>: updates * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit#heading=h.om262uy0elzx>: planning * AOB. Best, Wout |
|
From: Sylvie R. <syl...@un...> - 2024-02-22 14:07:16
|
Dear colleagues, dear members of the HUPO-PSI community, The HUPO Proteomics Standards Initiative (PSI) develops standards for documentation and storage of Proteomics data (see http://www.psidev.info for an overview of activities). The PSI Proteomics Informatics Working Group has submitted a new recommendation for consideration and review as a PSI standard. The mzIdentML document, draft of version 1.3.0, defines an XML schema that can be used to describe the outputs of proteomics search engines or similar software for peptide/protein identification from mass spectrometry(MS) data with an extension document for the identification of crosslinked peptides. After having been reviewed by the PSI steering group and revised as requested by an internal reviewer, the proposed documents, mzIdentML draft of version 1.3.0 and the crosslinking extension document, now go through the 45-day public and external review until*April 8^th , 2024*. The mzIdentML document (draft of version 1.3.0), a word document tracking changes from version 1.2.0, the crosslinking extension document, and the example files are available on GitHub as detailed below. *The mzIdentML document version 1.3.0, draft * https://github.com/HUPO-PSI/mzIdentML/blob/master/specification_document/specdoc1_3-draft/mzIdentML1.3.0-draft_vJuly2023.pdf *A word document tracking changes from version 1.2.0* https://github.com/HUPO-PSI/mzIdentML/blob/master/specification_document/specdoc1_3-draft/mzIdentML1.3.0-draft_vJuly2023_CC3%20JAV.docx *The crosslinking extension document* https://github.com/HUPO-PSI/mzIdentML/blob/master/specification_document/specdoc1_3-draft/mzIdentML%201.3.0%20Crosslinking%20Extension.pdf *The example files* https://github.com/HUPO-PSI/mzIdentML/tree/master/examples/1_3examples/crosslinking *The pre-print*is available at https://www.authorea.com/users/672647/articles/671627-mzidentml -1-3-0-essential-progress-on-the-support-of-crosslinking-and-other-identifications-based-on-multiple-spectra This message is to encourage you to contribute to the standards development activity by commenting on the documents. We invite both positive and negative comments on the relevance, correctness, clarity and appropriateness of the specification (e.g. is it presented in accordance with the templates and clearly written, is it sufficiently detailed and comprehensively described and are the examples in agreement with the specification?). Comments can be made on the specification as a whole or on specific parts. If you do not feel experienced enough to comment on this document, but know colleagues who are, please feel free to forward this message to them. There is no requirement that people commenting should have had any prior contact with the PSI. Please send your comments by e-mail directly to syl...@un... before*April 8th, 2024*. Thank you very much in advance for your help in improving PSI standards. Best wishes. Professor Sylvie RICARD-BLUM - PSI Editor Pericellular and Extracellular Supramolecular Assemblies UMR 5246 CNRS - University Lyon 1 Institute of Molecular and Supramolecular Chemistry and Biochemistry University Claude Bernard Lyon 1, 43 Boulevard du 11 novembre 1918 69622 Villeurbanne Cedex, France Phone: +33(0)4 72 44 82 32 E-mail: syl...@un... |
|
From: Wout B. <wou...@ua...> - 2024-02-20 18:33:54
|
Dear colleagues, We have our next teleconference tomorrow, Wednesday February 21st, at 16h00 CET (7h00 PST, 15h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * Specification document<https://docs.google.com/document/d/132F3MBgDJgtFlXxDZhpJ1oHGbKL8pT6dk9fvL55L5_M/edit?usp=sharing>: Accepted in PSI document process! 🎉 Update to FINAL and synchronize PSI website and GitHub. * PSI Meeting 2024<https://www.psidev.info/hupo-psi-meeting-2024>: Program check-in. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit#heading=h.2vumqqn1kasd>: Review last meeting's action points and finalize. * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit#heading=h.om262uy0elzx> * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2024-02-07 07:59:00
|
Dear colleagues, We have our next teleconference today, Wednesday February 7, at 16h00 CET (7h00 PST, 15h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * Specification document: Unfortunately no updates from the document process yet. * PSI Meeting 2024<https://www.psidev.info/hupo-psi-meeting-2024>: Program updates, if applicable. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit#heading=h.2vumqqn1kasd>: Review last meeting's action points and finalize. * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit#heading=h.om262uy0elzx> * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2024-01-23 16:58:35
|
Dear colleagues, We have our next teleconference tomorrow, Wednesday January 24, at 16h00 CET (7h00 PST, 15h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * PSI Meeting 2024<https://www.psidev.info/hupo-psi-meeting-2024>: Program overview. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: Review last meeting's action points and finalize. * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit?usp=sharing> * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2024-01-10 09:40:45
|
Dear colleagues, We have our next teleconference today, Wednesday January 10, at 16h00 CET (7h00 PST, 15h00 GMT). You can connect to our teleconference on Microsoft Teams through the following link: https://teams.microsoft.com/l/meetup-join/19%3ameeting_MzNhNGFmODEtY2QxZi00MTAyLTlkODMtMDBiNTgxMzNkMWQx%40thread.v2/0?context=%7b%22Tid%22%3a%22792e08fb-2d54-4a8e-af72-202548136ef6%22%2c%22Oid%22%3a%2242f2bf26-cfd5-4653-8e93-217e647f61b0%22%7d * Meeting ID: 311 403 481 845 * Passcode: Jm4d4s Agenda items: * PSI Meeting 2024<https://www.psidev.info/hupo-psi-meeting-2024>: Compile program. * mzQC software libraries manuscript<https://docs.google.com/document/d/1d-Il6MYJ5zQ-8UpabHe84L3Vau7bzuu5UZlTieGT2Js/edit>: Submit? * mzQC specification manuscript<https://docs.google.com/document/d/1fYPqDBqFamcjXlzX0RMStPOKQD4aHlQd9JHJAfqcjqs/edit?usp=sharing> * AOB. Best, Wout |
|
From: Wout B. <wou...@ua...> - 2023-12-18 10:10:46
|
Dear colleagues, The registration for the 2024 PSI Meeting in Kyoto, Japan is now open: https://www.psidev.info/hupo-psi-meeting-2024 Registration options include in-person attendance as well as remote participation. In case of in-person attendance, you can apply for a $800 travel grant. Best, Wout |
1 message has been excluded from this view by a project administrator.
