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From: Buildmaster <bui...@la...> - 2022-10-02 07:17:46
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Build ProteoWizard::Core Linux x86_64 debug #2365 (c701983888a1ae952b07db4f075e89fbd9b6a9e7) successful Tests passed: 246. Agent: pwiz-linux-i-083b082109d04350c Build results: https://teamcity.labkey.org/viewLog.html?buildId=2034075&buildTypeId=bt72 Changes included (1 change) ==================================================== Change c701983888a1ae952b07db4f075e89fbd9b6a9e7 by bre...@pr... (1 file): Skyline: Fix intermittent error in PasteTransitionListTest missing OkDialog() use see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2034075&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-10-01 08:21:44
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Build ProteoWizard::Core Linux x86_64 debug #2364 (11fdd2c6907ec94ab9b708fddded4d0da89029da) failed Tests failed: 1 (1 new), passed: 245. Agent: pwiz-linux-i-032fa2de17ac20378 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2033563&buildTypeId=bt72 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== maxquant-bsa-baf-v1_6_7 Newly failed tests details (naturally ordered) ================================================================== maxquant-bsa-baf-v1_6_7 (new) ================= Blib command returned 256 Changes included (3 changes) ==================================================== Change 11fdd2c6907ec94ab9b708fddded4d0da89029da by bre...@pr... (3 files): Skyline: Fix the --irt-database-path description using single-dash argument names "–irt-standards-group-name" and "–irt-standards-file" added another leading dash Change 3cb6d0e94dea85b22641b9faa6024d4c2c3c35eb by bs...@pr... (12 files): For Bruker PaSER support: (#2297) Bruker PaSER support improvements: Recognize "PrecursorIonMobility" as a synonym for "1/K0" Tidy up the Assay Library import UI so that column ID dropdowns don't use "Explicit" terminology, since these are library values, not per-node values (e.g. "Collision Energy" instead of "Explicit Collision Energy") Change c6433fcd7e3037360fb236345f38fbd7dcbbe022 by bre...@pr... (1 file): Skyline: Attempt to fix nightly test failure in TestMethodEditTutorial see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2033563&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-28 14:59:55
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Build ProteoWizard::BiblioSpec subset source tarball #1430 (8860818a93a9a7d2608a21a68af3e5dcc1afd053) successful Success. Agent: pwiz-linux-i-024d41e7e97a7fad6 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2025879&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change 8860818a93a9a7d2608a21a68af3e5dcc1afd053 by edw...@us... (4 files): Text PSM -> mzIdentML transformation tool used by the CPTAC CDAP pipeline (#2291) * textpsm2mzid Text PSM -> mzIdentML converter for CPTAC-CDAP see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2025879&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-28 10:03:35
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Build ProteoWizard::BiblioSpec subset source tarball #1429 (90f401cc6cd449abe07742167e8764a54133de99) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-0dc80ee49632f495f Build results: https://teamcity.labkey.org/viewLog.html?buildId=2025768&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change 90f401cc6cd449abe07742167e8764a54133de99 by bre...@pr... (1 file): Skyline: Another attempt at fixing intermittent failures in InsertTest - with some cleanup of the test code see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2025768&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-27 03:46:25
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Build ProteoWizard::Skyline master and PRs (Windows x86_64) #12289 (e87e76351a84d3fcd745836cdd1345670d43305d) successful Tests passed: 906. Agent: pwiz-vs-2022-i-0d0b6755ed5f94436 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2022947&buildTypeId=bt209 Changes included (2 changes) ==================================================== Change e87e76351a84d3fcd745836cdd1345670d43305d by bre...@pr... (1 file): - fix intermittent failure due to ModifyDocument() call added Change 6d0ee7bf822511e71c6b998d51863094258ad442 by bre...@pr... (2 files): Skyline: Fix AssayLibraryImportTest broken by recent PR see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2022947&buildTypeId=bt209 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-26 09:37:05
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #4045 (30aaf9a84ba37e87223c8d8da3837edc5fc465d9) successful Tests passed: 867. Agent: pwiz-vs-2022-i-0bbfede0b846af96b Build results: https://teamcity.labkey.org/viewLog.html?buildId=2020792&buildTypeId=bt210 Changes included (1 change) ==================================================== Change 30aaf9a84ba37e87223c8d8da3837edc5fc465d9 by ni...@pr... (1 file): Fix intermittent failure in ReportErrorDlgTest by passing false for "throwOnProgramException" in call to WaitForCondition so that Program.TestExceptions does not get dereferenced while it is null. (#2304) Co-authored-by: Nicholas Shulman <ni...@uw...> see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2020792&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-26 02:39:44
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Build ProteoWizard::ProteoWizard and Skyline Docker container (Wine x86_64) #8020 (c15b08c19dbd24c435bf24b7bb28ded8d214a478) failed to start Snapshot dependency failed: ... Skyline master and PRs (Windows x86_64). Agent: pwiz-linux-i-082190250a49d1641 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2020627&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 Changes included (1 change) ==================================================== Change 30aaf9a84ba37e87223c8d8da3837edc5fc465d9 by ni...@pr... (1 file): Fix intermittent failure in ReportErrorDlgTest by passing false for "throwOnProgramException" in call to WaitForCondition so that Program.TestExceptions does not get dereferenced while it is null. (#2304) Co-authored-by: Nicholas Shulman <ni...@uw...> see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2020627&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-26 02:37:33
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Build ProteoWizard::Skyline master and PRs (Windows x86_64) #12283 (30aaf9a84ba37e87223c8d8da3837edc5fc465d9) failed Tests failed: 1 (1 new), passed: 905. Agent: pwiz-vs-2022-i-05571ca63259df4dc Build results: https://teamcity.labkey.org/viewLog.html?buildId=2020623&buildTypeId=bt209 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== TestFunctional.dll,TestConnected.dll: TestAssayLibraryImport-en Newly failed tests details (naturally ordered) ================================================================== TestFunctional.dll,TestConnected.dll: TestAssayLibraryImport-en (new) ================= Assert.Fail failed. ------------------------------------------------------ Microsoft.VisualStudio.TestTools.UnitTesting.AssertFailedException: Assert.Fail failed. Timeout 360 seconds exceeded in WaitForOpenForm(ImportTransitionListErrorDlg). Open forms: SkylineWindow (Skyline - assay_import_cirt.sky), SequenceTreeForm (), GraphSpectrum (), ImportTransitionListColumnSelectDlg (Import Assay Library: Identify Columns), ThreadExceptionDialog (Skyline - assay_import_cirt.sky: See the end of this message for details on invoking just-in-time (JIT) debugging instead of this dialog box. ************** Exception Text ************** System.TimeoutException: pwiz.Skyline.Alerts.MessageDlg not closed for 10 seconds. Message = --------------------------- Skyline --------------------------- This transition list cannot be imported as it does not provide values for: Product m/z --------------------------- OK --------------------------- at pwiz.Skyline.Util.FormEx.ShowWithTimeout(IWin32Window parent, String message) in Z:\pwiz\pwiz_tools\Skyline\Util\FormEx.cs:line 184 at pwiz.Skyline.Alerts.AlertDlg.ShowAndDispose(IWin32Window parent) in Z:\pwiz\pwiz_tools\Skyline\Alerts\AlertDlg.cs:line 129 at pwiz.Skyline.FileUI.ImportTransitionListColumnSelectDlg.CheckForErrors(Boolean silentSuccess) in Z:\pwiz\pwiz_tools\Skyline\FileUI\ImportTransitionListColumnSelectDlg.cs:line 0 at pwiz.Skyline.FileUI.ImportTransitionListColumnSelectDlg.OkDialog() in Z:\pwiz\pwiz_tools\Skyline\FileUI\ImportTransitionListColumnSelectDlg.cs:line 979 ------------- End ThreadExceptionDialog Stack -------------) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.HandleFailure(String assertionName, String message) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.Fail(String message, Object[] parameters) at pwiz.SkylineTestUtil.AbstractFunctionalTest.WaitForOpenForm[TDlg](Int32 millis) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 671 at pwiz.SkylineTestUtil.AbstractFunctionalTest.ShowDialog[TDlg](Action act, Int32 millis) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 196 at pwiz.SkylineTestUtil.AbstractFunctionalTest.ImportAssayLibraryOrTransitionList(String csvPath, Boolean isAssayLibrary, ICollection`1 errorList, Boolean proceedWithErrors) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 2086 at pwiz.SkylineTestFunctional.AssayLibraryImportTest.TestAssayImport2() in Z:\pwiz\pwiz_tools\Skyline\TestFunctional\AssayLibraryImportTest.cs:line 1121 at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunTest() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1769 at pwiz.SkylineTestUtil.AbstractFunctionalTest.WaitForSkyline() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1714 ------------------------------------------------------ at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.HandleFailure(String assertionName, String message) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.Fail(String message, Object[] parameters) at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunFunctionalTest(String defaultUiMode) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1370 ------- Stdout: ------- 22. TestAssayLibraryImport Closing open form of type pwiz.Skyline.Controls.SequenceTreeForm Closing open form of type pwiz.Skyline.Controls.Graphs.GraphSpectrum Closing open form of type pwiz.Skyline.FileUI.ImportTransitionListColumnSelectDlg Closing open form of type System.Windows.Forms.ThreadExceptionDialog Changes included (1 change) ==================================================== Change 30aaf9a84ba37e87223c8d8da3837edc5fc465d9 by ni...@pr... (1 file): Fix intermittent failure in ReportErrorDlgTest by passing false for "throwOnProgramException" in call to WaitForCondition so that Program.TestExceptions does not get dereferenced while it is null. (#2304) Co-authored-by: Nicholas Shulman <ni...@uw...> see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2020623&buildTypeId=bt209 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-26 02:37:26
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Build ProteoWizard::Skyline Code Inspection #10239 (30aaf9a84ba37e87223c8d8da3837edc5fc465d9) failed to start Snapshot dependency failed: ... Skyline master and PRs (Windows x86_64). Agent: pwiz-vs-2022-i-05571ca63259df4dc Build results: https://teamcity.labkey.org/viewLog.html?buildId=2020624&buildTypeId=ProteoWizard_WindowsX8664msvcProfessionalSkylineResharperChecks Changes included (1 change) ==================================================== Change 30aaf9a84ba37e87223c8d8da3837edc5fc465d9 by ni...@pr... (1 file): Fix intermittent failure in ReportErrorDlgTest by passing false for "throwOnProgramException" in call to WaitForCondition so that Program.TestExceptions does not get dereferenced while it is null. (#2304) Co-authored-by: Nicholas Shulman <ni...@uw...> see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2020624&buildTypeId=ProteoWizard_WindowsX8664msvcProfessionalSkylineResharperChecks ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-25 09:44:19
|
Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #4044 (199c8cbed7311127e0ac78fc0b85af3f8289bb9f) failed Tests failed: 1 (1 new), passed: 866; percentage of method coverage 69.78 is 0.069 less than 69.849 in build #4040 (28ced7b50f58f65f8a083e52b3597148eb0fb2e2) (new). Agent: pwiz-vs-2022-i-04c61460eb0aefcf5 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2020296&buildTypeId=bt210 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== VSTest: pwiz.SkylineTestFunctional.AssayLibraryImportTest.TestAssayLibraryImport Newly failed tests details (naturally ordered) ================================================================== VSTest: pwiz.SkylineTestFunctional.AssayLibraryImportTest.TestAssayLibraryImport (new) ================= Assert.Fail failed. ------------------------------------------------------ Microsoft.VisualStudio.TestTools.UnitTesting.AssertFailedException: Assert.Fail failed. Timeout 720 seconds exceeded in WaitForOpenForm(ImportTransitionListErrorDlg). Open forms: SkylineWindow (Skyline - assay_import_cirt.sky), SequenceTreeForm (), GraphSpectrum (), ImportTransitionListColumnSelectDlg (Import Assay Library: Identify Columns), ThreadExceptionDialog (Microsoft .NET Framework: See the end of this message for details on invoking just-in-time (JIT) debugging instead of this dialog box. ************** Exception Text ************** System.TimeoutException: pwiz.Skyline.Alerts.MessageDlg not closed for 10 seconds. Message = --------------------------- Skyline --------------------------- This transition list cannot be imported as it does not provide values for: Product m/z --------------------------- OK --------------------------- at pwiz.Skyline.Util.FormEx.ShowWithTimeout(IWin32Window parent, String message) in Z:\pwiz\pwiz_tools\Skyline\Util\FormEx.cs:line 189 at pwiz.Skyline.Alerts.AlertDlg.ShowAndDispose(IWin32Window parent) in Z:\pwiz\pwiz_tools\Skyline\Alerts\AlertDlg.cs:line 129 at pwiz.Skyline.Alerts.MessageDlg.Show(IWin32Window parent, String message, Boolean ignoreModeUI) in Z:\pwiz\pwiz_tools\Skyline\Alerts\MessageDlg.cs:line 29 at pwiz.Skyline.FileUI.ImportTransitionListColumnSelectDlg.CheckForErrors(Boolean silentSuccess) in Z:\pwiz\pwiz_tools\Skyline\FileUI\ImportTransitionListColumnSelectDlg.cs:line 1245 at pwiz.Skyline.FileUI.ImportTransitionListColumnSelectDlg.OkDialog() in Z:\pwiz\pwiz_tools\Skyline\FileUI\ImportTransitionListColumnSelectDlg.cs:line 979 ------------- End ThreadExceptionDialog Stack -------------) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.HandleFailure(String assertionName, String message) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.Fail(String message, Object[] parameters) at pwiz.SkylineTestUtil.AbstractFunctionalTest.WaitForOpenForm[TDlg](Int32 millis) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 669 at pwiz.SkylineTestUtil.AbstractFunctionalTest.ShowDialog[TDlg](Action act, Int32 millis) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 196 at pwiz.SkylineTestUtil.AbstractFunctionalTest.ImportAssayLibraryOrTransitionList(String csvPath, Boolean isAssayLibrary, ICollection`1 errorList, Boolean proceedWithErrors) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 2086 at pwiz.SkylineTestUtil.AbstractFunctionalTest.ImportAssayLibrarySkipColumnSelect(String csvPath, List`1 errorList) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 2071 at pwiz.SkylineTestFunctional.AssayLibraryImportTest.TestAssayImport2() in Z:\pwiz\pwiz_tools\Skyline\TestFunctional\AssayLibraryImportTest.cs:line 1121 at pwiz.SkylineTestFunctional.AssayLibraryImportTest.DoTest() in Z:\pwiz\pwiz_tools\Skyline\TestFunctional\AssayLibraryImportTest.cs:line 61 at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunTest() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1769 at pwiz.SkylineTestUtil.AbstractFunctionalTest.WaitForSkyline() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1713 ------------------------------------------------------ at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunFunctionalTest(String defaultUiMode) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1361 at pwiz.SkylineTestFunctional.AssayLibraryImportTest.TestAssayLibraryImport() in Z:\pwiz\pwiz_tools\Skyline\TestFunctional\AssayLibraryImportTest.cs:line 51 ------- Stdout: ------- Closing open form of type pwiz.Skyline.Controls.SequenceTreeForm Closing open form of type pwiz.Skyline.Controls.Graphs.GraphSpectrum Closing open form of type pwiz.Skyline.FileUI.ImportTransitionListColumnSelectDlg Closing open form of type System.Windows.Forms.ThreadExceptionDialog Changes included (3 changes) ==================================================== Change 199c8cbed7311127e0ac78fc0b85af3f8289bb9f by bre...@pr... (2 files): - fix toolbar buttons and right-click menu in ViewLibraryDlg broken adding property page Change bf5b41189b539b44d559162caf1aa174132f61a3 by bre...@pr... (2 files): - fix ImportTransitionListColumnSelectDlg to start with the right radio button checked Change ab453efa6721d8aba5512481941445c1062d2dc7 by bre...@pr... (3 files): Skyline: Fix assay library importing to handle unsorted transition lists see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2020296&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-24 22:30:57
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Build ProteoWizard::ProteoWizard and Skyline Docker container (Wine x86_64) #8018 (c15b08c19dbd24c435bf24b7bb28ded8d214a478) failed Execution timeout (new). Agent: pwiz-linux-i-0346888d4b8e90f00 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2020043&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 Changes included (3 changes) ==================================================== Change 199c8cbed7311127e0ac78fc0b85af3f8289bb9f by bre...@pr... (2 files): - fix toolbar buttons and right-click menu in ViewLibraryDlg broken adding property page Change bf5b41189b539b44d559162caf1aa174132f61a3 by bre...@pr... (2 files): - fix ImportTransitionListColumnSelectDlg to start with the right radio button checked Change ab453efa6721d8aba5512481941445c1062d2dc7 by bre...@pr... (3 files): Skyline: Fix assay library importing to handle unsorted transition lists see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2020043&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-21 10:47:01
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #4023 (13eafa5005ff7a8181ac0c93a8ff1d2cd4499e02) successful Tests passed: 867. Agent: pwiz-vs-2022-i-0613409e106b0f989 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2012362&buildTypeId=bt210 Changes included (4 changes) ==================================================== Change 13eafa5005ff7a8181ac0c93a8ff1d2cd4499e02 by bs...@pr... (5 files): Added a test to verify that tutorial download links in the Start page are valid,… (#2290) Added a test to verify that tutorial download links in the Start page are valid, and fix one that wasn't Change aba6169ffda10efd4f7913908d43c0784cbc6239 by ni...@pr... (16 files): Unhandled Error reporting improvements: (#2286) * Unhandled Error reporting improvements (Not reported or requested by anyone): 1. Limit size of the Skyline document (and other attachments) which get included with the error report to 10MB each. 2. Change the wording of a few items on the DetailedReportErrorDlg (capitalization of "Skyline" and remove part about "not full screenshot"). 3. Add menu item to Help menu: "Submit Error Report..." which is only visible if you are holding down the shift key when you drop the Help menu. Enables testing the Unhandled error dialog. 4. Fix MessageBoxHelper so that it disallows NaN and Infinity values for doubles, and catches exception if the user tries to enter an integer that is too large. 5. Fix place where detection histogram would get into an infinite loop if you entered NaN for the q-value cutoff. Change 73ac814eb44b45010c75e37a4cc19bf1d1c29595 by bre...@pr... (3 files): Skyline: Test fixes based on all night parallel test run failures Change 16732e7e6be5bc1fffd82bd3d6604faf17ed20b1 by ni...@pr... (1 file): Fix intermittent failure in TestEncyclopeDiaPeptidesWithNoSignal. (#2292) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2012362&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-20 10:59:06
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Build ProteoWizard::Core Linux x86_64 debug #2353 (521f45eff573dc3b1ff07d974d928f241fa1bedf) successful Tests passed: 246. Agent: pwiz-linux-i-0594929a89e276126 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2009797&buildTypeId=bt72 Changes included (1 change) ==================================================== Change 521f45eff573dc3b1ff07d974d928f241fa1bedf by ni...@pr... (5 files): Skip over "-1" retention times when reading EncyclopeDIA results. (#2266) Fixed "The document specific spectral library does not have valid retention times" when importing peptide search existing EncyclopeDIA 2.0 library (reported by Mike) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2009797&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-20 10:45:14
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #4015 (521f45eff573dc3b1ff07d974d928f241fa1bedf) failed Tests failed: 1 (1 new), passed: 865. Agent: pwiz-vs-2022-i-058a4760ff69c7324 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2009801&buildTypeId=bt210 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== VSTest: pwiz.SkylineTestFunctional.EncyclopeDiaPeptidesWithNoSignalTest.TestEncyclopeDiaPeptidesWithNoSignal Newly failed tests details (naturally ordered) ================================================================== VSTest: pwiz.SkylineTestFunctional.EncyclopeDiaPeptidesWithNoSignalTest.TestEncyclopeDiaPeptidesWithNoSignal (new) ================= Assert.Fail failed. ------------------------------------------------------ Microsoft.VisualStudio.TestTools.UnitTesting.AssertFailedException: Assert.IsNotNull failed. at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.HandleFailure(String assertionName, String message) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.IsNotNull(Object value) at pwiz.SkylineTestFunctional.EncyclopeDiaPeptidesWithNoSignalTest.DoTest() in Z:\pwiz\pwiz_tools\Skyline\TestFunctional\EncyclopeDiaPeptidesWithNoSignalTest.cs:line 148 at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunTest() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1769 at pwiz.SkylineTestUtil.AbstractFunctionalTest.WaitForSkyline() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1713 ------------------------------------------------------ at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunFunctionalTest(String defaultUiMode) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1361 at pwiz.SkylineTestFunctional.EncyclopeDiaPeptidesWithNoSignalTest.TestEncyclopeDiaPeptidesWithNoSignal() in Z:\pwiz\pwiz_tools\Skyline\TestFunctional\EncyclopeDiaPeptidesWithNoSignalTest.cs:line 45 ------- Stdout: ------- Closing open form of type pwiz.Skyline.Controls.SequenceTreeForm Closing open form of type pwiz.Skyline.Controls.Graphs.GraphSpectrum Changes included (1 change) ==================================================== Change 521f45eff573dc3b1ff07d974d928f241fa1bedf by ni...@pr... (5 files): Skip over "-1" retention times when reading EncyclopeDIA results. (#2266) Fixed "The document specific spectral library does not have valid retention times" when importing peptide search existing EncyclopeDIA 2.0 library (reported by Mike) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2009801&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-17 08:59:26
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Build ProteoWizard::Core subset source tarball #4284 (f49bbcdd402fb9f3f8dde54947a243405e868cf9) successful Success. Agent: pwiz-linux-i-034de1fff8f4d6795 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2006693&buildTypeId=bt81 Changes included (1 change) ==================================================== Change f49bbcdd402fb9f3f8dde54947a243405e868cf9 by mat...@gm... (1 file): * added Sqlite.interop.dll to Skyline.csproj see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2006693&buildTypeId=bt81 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-17 08:54:51
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Build ProteoWizard::Core Linux x86_64 debug #2352 (f49bbcdd402fb9f3f8dde54947a243405e868cf9) failed Tests failed: 1 (1 new), passed: 245. Agent: pwiz-linux-i-034de1fff8f4d6795 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2006671&buildTypeId=bt72 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== openswath-osw Newly failed tests details (naturally ordered) ================================================================== openswath-osw (new) ================= Blib command returned 256 Changes included (1 change) ==================================================== Change f49bbcdd402fb9f3f8dde54947a243405e868cf9 by mat...@gm... (1 file): * added Sqlite.interop.dll to Skyline.csproj see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2006671&buildTypeId=bt72 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-14 22:43:42
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Build ProteoWizard::Core subset source tarball #4283 (7de06d71aa6ba922af90e16eb1f2816797a77d1a) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-0f3153e6571bc0d17 Build results: https://teamcity.labkey.org/viewLog.html?buildId=2000671&buildTypeId=bt81 Changes included (1 change) ==================================================== Change 7de06d71aa6ba922af90e16eb1f2816797a77d1a by bs...@pr... (5 files): Fix for a problem with Agilent IMS data where fringe CCS and/or DT values cannot roundtrip through the CCS/DT conversion… (#2281) * Fix for a problem with Agilent IMS data where fringe CCS and/or DT values cannot roundtrip through the CCS/DT conversion (throws exception "Cannot solve cubic fit"). Now when we hit these, we just stick with any measured DT value since the CCS conversion isn't useful. Reported by user Alan see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=2000671&buildTypeId=bt81 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-14 10:55:33
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Build ProteoWizard::Core Windows x86_64 subset (no vendor DLLs) #1956 (9f7a67ba29bd6ccdde6ae0eb34a9de12c64b1cb8) successful Success. Agent: pwiz-vs-2022-i-0739076925a3f9aac Build results: https://teamcity.labkey.org/viewLog.html?buildId=1999861&buildTypeId=ProteoWizard_WindowsX86subsetNoVendorDll Changes included (1 change) ==================================================== Change 9f7a67ba29bd6ccdde6ae0eb34a9de12c64b1cb8 by bre...@us... (9 files): Skyline: Main branch updates for 22.2 release (#2280) * Skyline: Merge pre-release changes from skyline_22_2 branch - Make DocumentFormat 22.2 for the release - A few comment revisions referencing "Skyline-daily" * Skyline: Update version numbers for post 22.2 Skyline-daily releases see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1999861&buildTypeId=ProteoWizard_WindowsX86subsetNoVendorDll ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-12 22:32:07
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Build ProteoWizard::Skyline Release Branch x86_64 #759 (c992063135b78b647e9baec5d6abce358e65cd94) successful Tests passed: 1026. Agent: pwiz-vs-2022-i-013c0613b2436f59b Build results: https://teamcity.labkey.org/viewLog.html?buildId=1997110&buildTypeId=ProteoWizard_WindowsX8664SkylineReleaseBranchMsvcProfessional Changes included (1 change) ==================================================== Change c992063135b78b647e9baec5d6abce358e65cd94 by bre...@pr... (3 files): Skyline (22.2): Release-only changes not to be cherry-picked to master - Update version number, change Skyline-daily to Skyline - Switch to release icon see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1997110&buildTypeId=ProteoWizard_WindowsX8664SkylineReleaseBranchMsvcProfessional ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-12 20:58:19
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Build ProteoWizard::ProteoWizard and Skyline (release branch) Docker container (Wine x86_64) #326 (c15b08c19dbd24c435bf24b7bb28ded8d214a478) failed to start Snapshot dependency failed: ... Skyline Release Branch x86_64. Agent: pwiz-linux-i-002ebba54d50a0732 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1996898&buildTypeId=ProteoWizard_ProteoWizardAndSkylineReleaseBranchDockerContainerWineX8664 Changes included (3 changes) ==================================================== Change a25839866841d1ca4677116dd9b940163fd9c7e8 by mat...@gm... (19 files): - fixed Sciex SRM/SIM chromatograms missing CE/DP and added more fields to the chromatogram id * restored Enolase WIFF file (deleted when Reader_ABI_Test tarball was deleted instead of updated) Change d3cc8ddc84fba547878a55af68ab5730d526a59a by mat...@gm... (2 files): - fixed possible crash reading large Thermo instrument methods into unmanaged memory (reported by Nathaniel) Change 397a208316a73426ddcbd4635f9b431565a4e9ea by bre...@pr... (7 files): Skyline (22.2): Pre-release changes for merging to master - Make DocumentFormat 22.2 for the release - A few comment revisions referencing "Skyline-daily" see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1996898&buildTypeId=ProteoWizard_ProteoWizardAndSkylineReleaseBranchDockerContainerWineX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-12 20:56:03
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Build ProteoWizard::Skyline Release Branch x86_64 #758 (a25839866841d1ca4677116dd9b940163fd9c7e8) failed Tests failed: 1 (1 new), passed: 747. Agent: pwiz-vs-2022-i-06835e6e6026bd038 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1996896&buildTypeId=ProteoWizard_WindowsX8664SkylineReleaseBranchMsvcProfessional Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== Test.dll: TestDocumentFormatCurrent-en Newly failed tests details (naturally ordered) ================================================================== Test.dll: TestDocumentFormatCurrent-en (new) ================= Assert.AreEqual failed. Expected a difference no greater than <0.099> between expected value <22.1> and actual value <22.2>. DocumentFormat.CURRENT 22.2 is expected to be less than 0.1 from the current Skyline version 22.1 at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.HandleFailure(String assertionName, String message) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.AreEqual(Double expected, Double actual, Double delta, String message, Object[] parameters) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.AreEqual(Double expected, Double actual, Double delta, String message) at pwiz.SkylineTest.DocumentSerializerTest.TestDocumentFormatCurrent() in C:\skyline_release\pwiz_tools\Skyline\Test\DocumentSerializerTest.cs:line 47 ------- Stdout: ------- 182. TestDocumentFormatCurrent Changes included (3 changes) ==================================================== Change a25839866841d1ca4677116dd9b940163fd9c7e8 by mat...@gm... (19 files): - fixed Sciex SRM/SIM chromatograms missing CE/DP and added more fields to the chromatogram id * restored Enolase WIFF file (deleted when Reader_ABI_Test tarball was deleted instead of updated) Change d3cc8ddc84fba547878a55af68ab5730d526a59a by mat...@gm... (2 files): - fixed possible crash reading large Thermo instrument methods into unmanaged memory (reported by Nathaniel) Change 397a208316a73426ddcbd4635f9b431565a4e9ea by bre...@pr... (7 files): Skyline (22.2): Pre-release changes for merging to master - Make DocumentFormat 22.2 for the release - A few comment revisions referencing "Skyline-daily" see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1996896&buildTypeId=ProteoWizard_WindowsX8664SkylineReleaseBranchMsvcProfessional ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-12 07:48:28
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Build ProteoWizard::Core Windows x86_64 subset #3802 (dff031cfbfc1badf56903766be640b9ae3da20fa) failed to start Error while applying patch. Agent: pwiz-vs-2022-i-0a9ae5693c36d5cc4 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1996437&buildTypeId=bt88 Changes included (2 changes) ==================================================== Change dff031cfbfc1badf56903766be640b9ae3da20fa by ni...@pr... (4 files): Fix deserialization error after removing neutral loss modification from setting (#2256) Fixed bug where saving document after removing modification with neutral losses from settings results in document which cannot be opened (reported by Josh) Change 5a4d639493c777d0bd0966329b5e7c09a7676949 by ni...@pr... (20 files): Alphabetize resx files automatically (#2228) Alphabetize ColumnCaptions.resx and ColumnTooltips.resx automatically as a pre-build event. In the future, additional folders to be processed can be added to batch file "PreBuildEvents.bat" see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1996437&buildTypeId=bt88 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-12 07:48:26
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Build ProteoWizard::Core Windows x86_64 subset (no vendor DLLs) #1955 (dff031cfbfc1badf56903766be640b9ae3da20fa) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-vs-2022-i-0a9ae5693c36d5cc4 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1996434&buildTypeId=ProteoWizard_WindowsX86subsetNoVendorDll Changes included (2 changes) ==================================================== Change dff031cfbfc1badf56903766be640b9ae3da20fa by ni...@pr... (4 files): Fix deserialization error after removing neutral loss modification from setting (#2256) Fixed bug where saving document after removing modification with neutral losses from settings results in document which cannot be opened (reported by Josh) Change 5a4d639493c777d0bd0966329b5e7c09a7676949 by ni...@pr... (20 files): Alphabetize resx files automatically (#2228) Alphabetize ColumnCaptions.resx and ColumnTooltips.resx automatically as a pre-build event. In the future, additional folders to be processed can be added to batch file "PreBuildEvents.bat" see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1996434&buildTypeId=ProteoWizard_WindowsX86subsetNoVendorDll ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-12 07:19:06
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Build ProteoWizard::BiblioSpec subset source tarball #1417 (dff031cfbfc1badf56903766be640b9ae3da20fa) successful Success. Agent: pwiz-linux-i-0dfef4088fb7d6148 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1996426&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (2 changes) ==================================================== Change dff031cfbfc1badf56903766be640b9ae3da20fa by ni...@pr... (4 files): Fix deserialization error after removing neutral loss modification from setting (#2256) Fixed bug where saving document after removing modification with neutral losses from settings results in document which cannot be opened (reported by Josh) Change 5a4d639493c777d0bd0966329b5e7c09a7676949 by ni...@pr... (20 files): Alphabetize resx files automatically (#2228) Alphabetize ColumnCaptions.resx and ColumnTooltips.resx automatically as a pre-build event. In the future, additional folders to be processed can be added to batch file "PreBuildEvents.bat" see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1996426&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-11 08:22:01
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Build ProteoWizard::BiblioSpec subset source tarball #1416 (09f3e1af6b5c88985ea7af0065d8ed46e59229f6) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-000ede3bfe55ca5eb Build results: https://teamcity.labkey.org/viewLog.html?buildId=1996275&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (2 changes) ==================================================== Change 09f3e1af6b5c88985ea7af0065d8ed46e59229f6 by ni...@pr... (6 files): MS stats external tool fixes (#2278) Fixed error in MSstats external tool if Skyline document folder name starts with a number (reported by Melissa on MSstats support board) Change R version used by external tool from 4.1.2 to 4.2.1. Change 38c6030dd30dbff25bc310243dd269776faec0b2 by bre...@pr... (1 file): Skyline: Attempt to fix a race condition in TestInsert see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1996275&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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