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From: Buildmaster <bui...@la...> - 2022-09-09 20:46:04
|
Build ProteoWizard::BiblioSpec subset source tarball #1414 (f217415be7c1fb76f34a498f1a79504ea7e6383c) successful Success. Agent: pwiz-linux-i-0e91229c3017d022b Build results: https://teamcity.labkey.org/viewLog.html?buildId=1992543&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change f217415be7c1fb76f34a498f1a79504ea7e6383c by mat...@gm... (2 files): - fixed possible crash reading large Thermo instrument methods into unmanaged memory (reported by Nathaniel) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1992543&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-09 14:39:33
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Build ProteoWizard::BiblioSpec subset source tarball #1413 (1e4c3abccc05626bc215bcf3fee6ed0e33613360) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-00f70aaccd2033054 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1991963&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change 1e4c3abccc05626bc215bcf3fee6ed0e33613360 by mat...@gm... (19 files): - fixed Sciex SRM/SIM chromatograms missing CE/DP and added more fields to the chromatogram id * restored Enolase WIFF file (deleted when Reader_ABI_Test tarball was deleted instead of updated) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1991963&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-09 11:00:26
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Build ProteoWizard::BiblioSpec subset source tarball #1412 (0c5a29850913f293ff0c9b9373967a7f7f1469fe) successful Success. Agent: pwiz-linux-i-02b8ffdd8f4698ba2 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1991847&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (2 changes) ==================================================== Change 0c5a29850913f293ff0c9b9373967a7f7f1469fe by 523...@us... (4 files): Fixed exception when exporting Bruker timsTOF methods with ion mobilities outside template range (#2264) Change b463749360896464b13577ff975a74afb25fd31f by 523...@us... (3 files): Only allow single precursors to show spectra in GraphSpectrum (#2254) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1991847&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-09 08:32:41
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3972 (???) failed to start Unable to collect changes. Agent: pwiz-vs-2022-i-094a86edcb4afea71 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1991804&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-08 12:01:58
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Build ProteoWizard::Skyline Release Perf and Tutorial tests (Windows x86_64) #100 (ceb4c60706d84e4f9fbc502d0d7fb14ff3fca41b) successful Tests passed: 70. Agent: pwiz-vs-2022-i-0c127dc9e77146255 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1989907&buildTypeId=ProteoWizard_SkylineReleasePerfAndTutorialTestsWindowsX8664 Changes included (2 changes) ==================================================== Change ceb4c60706d84e4f9fbc502d0d7fb14ff3fca41b by bre...@pr... (1 file): - restore log truncation in SkylineNightly::TabBase.StartLog Change 8ba35a287e45d0cbafcb6ccd979261f50d94ea0f by 41898282+github-actions[bot]@users.noreply.github.com (5 files): Automatic cherry pick of #2259 from master to Skyline/skyline_22_2 (#2261) * Skyline: Add exception handling and logging for SkylineTester named pipe registration communication with SkylineNightly * - reorganize so that listener gets added before command processing starts * - allow only once through SkylineTester TabNightly.StartNightly for SkylineNightly runs see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1989907&buildTypeId=ProteoWizard_SkylineReleasePerfAndTutorialTestsWindowsX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-08 10:53:38
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Build ProteoWizard::BiblioSpec subset source tarball #1411 (c9dc20aba86d8c3a57f7bfe1718a255f4336e3d5) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-0f80c1f8efc196285 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1989954&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (2 changes) ==================================================== Change c9dc20aba86d8c3a57f7bfe1718a255f4336e3d5 by bre...@us... (4 files): Skyline: Make WIFF2 tests NoParallelTesting (#2262) - Fix potential race conditions in TestMultiSampleImportPeakBoundaries and TestExistingExperimentsTutorial Change d0c7ec976a1307862d2f8e028e987f919937ff9e by bre...@pr... (1 file): - restore log truncation in SkylineTester::TabBase.StartLog see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1989954&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-08 08:29:22
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Build ProteoWizard::Skyline master and PRs (Windows x86_64 debug, with code coverage) #3966 (???) failed to start Unable to collect changes. Agent: pwiz-vs-2022-i-0c127dc9e77146255 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1989894&buildTypeId=bt210 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-07 08:24:55
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Build ProteoWizard::BiblioSpec subset source tarball #1410 (826307975ae203cdf10081c3a9782f663da1e01d) successful Success. Agent: pwiz-linux-i-0540a7352f833fdb9 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1987908&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change 826307975ae203cdf10081c3a9782f663da1e01d by bre...@us... (5 files): Skyline: Add exception handling and logging for SkylineTester named pipe… (#2259) * Skyline: Add exception handling and logging for SkylineTester named pipe registration communication with SkylineNightly * - reorganize so that listener gets added before command processing starts * - allow only once through SkylineTester TabNightly.StartNightly for SkylineNightly runs * - make initiating background loader a bit more robust see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1987908&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-05 09:43:48
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Build ProteoWizard::Skyline Release Perf and Tutorial tests (Windows x86_64) #97 (a4b2b08e92d43fd13f844303dd232307ccdcca10) failed Tests failed: 1 (1 new), passed: 69. Agent: pwiz-vs-2022-i-0029652f72984ce3c Build results: https://teamcity.labkey.org/viewLog.html?buildId=1984660&buildTypeId=ProteoWizard_SkylineReleasePerfAndTutorialTestsWindowsX8664 Failed Tests Summary: Newly failed tests (1 test, alphabetically ordered) ================================================================== UniquePeptides2PerfTest: UniquePeptides2PerfTest-en Newly failed tests details (naturally ordered) ================================================================== UniquePeptides2PerfTest: UniquePeptides2PerfTest-en (new) ================= Assert.Fail failed. ------------------------------------------------------ Microsoft.VisualStudio.TestTools.UnitTesting.AssertFailedException: Assert.Fail failed. Timeout 360 seconds exceeded in WaitForClosedForm(form class=pwiz.Skyline.SettingsUI.PeptideSettingsUI, form text="Peptide Settings"). Open forms: SequenceTreeForm (), SkylineWindow (Skyline - lots_of_human_proteins.sky *), PeptideSettingsUI (Peptide Settings) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.HandleFailure(String assertionName, String message) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.Fail(String message, Object[] parameters) at TestPerf.PerfUniquePeptidesTest.ChooseBackgroundProteomeAndUniqunessFilter(String protdbPath, PeptideUniquenessConstraint constraint, Boolean doCancel, String fastaFilePath) in Z:\pwiz\pwiz_tools\Skyline\TestPerf\PerfUniquePeptidesTest.cs:line 228 at TestPerf.PerfUniquePeptidesTest.runScenario(PeptideUniquenessConstraint cancellationCheckType, String initialBackgroundProteome, String newBackgroundProteome) in Z:\pwiz\pwiz_tools\Skyline\TestPerf\PerfUniquePeptidesTest.cs:line 174 at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunTest() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1769 at pwiz.SkylineTestUtil.AbstractFunctionalTest.WaitForSkyline() in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1714 ------------------------------------------------------ at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.HandleFailure(String assertionName, String message) at Microsoft.VisualStudio.TestTools.UnitTesting.Assert.Fail(String message, Object[] parameters) at pwiz.SkylineTestUtil.AbstractFunctionalTest.RunFunctionalTest(String defaultUiMode) in Z:\pwiz\pwiz_tools\Skyline\TestUtil\TestFunctional.cs:line 1370 ------- Stdout: ------- [09:27] 1.0 UniquePeptides2PerfTest (en) # Downloading test data file https://skyline-perftest.s3-us-west-2.amazonaws.com/perftests/PerfUniquePeptidesTest.zip... done. Download time 5 sec Closing open form of type pwiz.Skyline.Controls.SequenceTreeForm Closing open form of type pwiz.Skyline.SettingsUI.PeptideSettingsUI Changes included (1 change) ==================================================== Change a4b2b08e92d43fd13f844303dd232307ccdcca10 by 41898282+github-actions[bot]@users.noreply.github.com (3 files): Automatic cherry pick of #2257 from master to Skyline/skyline_22_2 (#2258) Skyline: Fix SkylineTester timeout command use to wait for a retry - clean-up SkylineNightly Run() function to be more maintainable - make sure LogFileMonitor is always monitoring the current log during retries see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1984660&buildTypeId=ProteoWizard_SkylineReleasePerfAndTutorialTestsWindowsX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-05 08:25:44
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Build ProteoWizard::Core subset source tarball #4273 (ce619fc610cd03ba83ab17dc8064e43b466b0382) successful Success. Agent: pwiz-linux-i-0a468777868bb0764 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1984666&buildTypeId=bt81 Changes included (1 change) ==================================================== Change ce619fc610cd03ba83ab17dc8064e43b466b0382 by bre...@us... (3 files): Attempt to fix nightly test issues (#2257) Skyline: Fix SkylineTester timeout command use to wait for a retry - clean-up SkylineNightly Run() function to be more maintainable - make sure LogFileMonitor is always monitoring the current log during retries see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1984666&buildTypeId=bt81 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-05 08:23:03
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Build ProteoWizard::BiblioSpec subset source tarball #1409 (ce619fc610cd03ba83ab17dc8064e43b466b0382) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-0a468777868bb0764 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1984664&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change ce619fc610cd03ba83ab17dc8064e43b466b0382 by bre...@us... (3 files): Attempt to fix nightly test issues (#2257) Skyline: Fix SkylineTester timeout command use to wait for a retry - clean-up SkylineNightly Run() function to be more maintainable - make sure LogFileMonitor is always monitoring the current log during retries see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1984664&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-09-03 10:23:17
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Build ProteoWizard::Core subset source tarball #4272 (a9d1660cbe0679049db5db9069e6d742d55e5a2c) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-06dda6f2485439567 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1984169&buildTypeId=bt81 Changes included (1 change) ==================================================== Change a9d1660cbe0679049db5db9069e6d742d55e5a2c by ni...@uw... (2 files): Fix failure in TestLibraryMatchView in debug code coverage on TeamCity (currently the failure only happens in pull request #2182). Add Bruker "THIRD-PARTY-LICENSE-README.txt" to .gitignore see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1984169&buildTypeId=bt81 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-30 11:05:28
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Build ProteoWizard::BiblioSpec subset source tarball #1406 (f242d7f0660a80ba4ce367006d6a46f575ed4270) successful Success. Agent: pwiz-linux-i-0dee0f136bbb6866c Build results: https://teamcity.labkey.org/viewLog.html?buildId=1975015&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change f242d7f0660a80ba4ce367006d6a46f575ed4270 by bre...@us... (1 file): Skyline: Attempt to fix DLL locking caused by adding TestInfo.IsAuditLogTest (#2251) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1975015&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-29 20:28:20
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Build ProteoWizard::BiblioSpec subset source tarball #1405 (04a0e8c21517ab46168be68c816fa44f13a39ee9) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-01725df728bc61b75 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1974177&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change 04a0e8c21517ab46168be68c816fa44f13a39ee9 by mat...@gm... (67 files): - added support for Bruker TSF format - fixed timsTOF instrument type not being recorded in instrumentConfiguration * updated PSI-MS CV to 4.1.99 * added Bruker TSF to Skyline DataSourceUtil - fixed negative CE in negative polarity Bruker data not being reported see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1974177&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-27 10:36:22
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Build ProteoWizard::BiblioSpec subset source tarball #1404 (a2889c12f90fb9fdb051a5412d45990126f66856) successful Success. Agent: pwiz-linux-i-0c5eec778bc352c60 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1973595&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change a2889c12f90fb9fdb051a5412d45990126f66856 by ni...@pr... (20 files): Apply custom formats when doing "Copy All" or "Export" from Document grid (#2247) Fixed so that custom formats are applied when doing "Copy All" or "Export" from Document Grid, or other data grids (reported by Kristine) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1973595&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-25 12:37:27
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Build ProteoWizard::BiblioSpec subset source tarball #1403 (a42ac62730568330905053f77c6ac1da0d6c73ca) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-0f95c263a184115ec Build results: https://teamcity.labkey.org/viewLog.html?buildId=1968219&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (3 changes) ==================================================== Change a42ac62730568330905053f77c6ac1da0d6c73ca by 523...@us... (3 files): Added audit log filter to SkylineTester (#2243) * Added audit log filter to SkylineTester Change adc94917921e7240f92ae1ae3d2707e80a4f9e15 by ni...@pr... (5 files): Fix Molecule.ToString() so that it includes negative (#2235) * Fix Molecule.ToString() so that it includes the elements whose element count is negative. Also, remove all entries where the element count is equal to zero, so Molecule.Equals works as expected. Change c019a4691cdcefb8668e7746c0e801452f890626 by ni...@pr... (1 file): Fix NRE in "ElementRefs.GetNodeRef" (#2244) Fixed "Unexpected Error" changing annotation value in document grid when the document had been changed (reported anonymously) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1968219&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-24 01:41:44
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Build ProteoWizard::BiblioSpec subset source tarball #1402 (d7a2cbad25261f8d2ea623124102b94f1c7afaec) successful Success. Agent: pwiz-linux-i-0f0ce82c394e4a91a Build results: https://teamcity.labkey.org/viewLog.html?buildId=1965379&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (12 changes) ==================================================== Change d7a2cbad25261f8d2ea623124102b94f1c7afaec by bre...@us... (0 file): Merge pull request #2240 from ProteoWizard/Skyline/work/20220823_merge_22_2 Merge 22.2 branch translations and test fixes to master Change 22b515c731a8dccaf1a9390857e8f0289ba84f6d by bre...@pr... (1 file): Skyline: Attempt to fix intermittent failure in TestInsert Change 8a20620ef2098765614b7241e6f07d5c1ae4682e by bre...@pr... (2 files): Skyline (22.2): Update ja/TestTargetedMSMSTutorialAsSmallMolecules*.log files Change e0d33db8e4f63a00ae77abc625d9ee94406dea70 by bre...@us... (56 files): Skyline (22.2): Integrate Japanese RESX files (#2230) - with a few Chinese and English RESX fixes Change 7663777f8b6d9a4ffd4bb948b58e8a7891d99b36 by bre...@pr... (13 files): Skyline (22.2): Update tutorial logs for Chinese RESX changes Change f2df3b4ccc30241910349fbf30e4c5c4329544ca by bre...@us... (9 files): Skyline (22.2): Add new .zh-CHS.resx files missed with original merge of Chinese translation (#2221) Change 060a65cae5e6a9320ab8e15854d7dffea86facd6 by bre...@us... (35 files): Skyline (22.2): RESX files for Chinese localization (#2219) Change 88c6f32de0cee02a5acc4dd9dd23ce75a76c1ac6 by bre...@us... (3 files): Skyline (22.2): Fix intermittent failure in TestExistingExperimentsTutorial (#2216) - Use WaitForBackgroundProteomeLoaderCompleted() to avoid unexpected document change - Fix SkylineWindow.ImportMassList() to preserve protein associations from the ImportTransitionListColumnSelectDlg when document changes before ModifyDocument() can commit the change Change e0b4936dc8c0ee058b836f22389253fc397763a6 by ni...@pr... (3 files): Fix bug where removing an explicit modification from a document with decoys could result in a document which could no longer be opened. (reported by susannah) (#2229) Fixed bug where removing an explicit modification from a document with decoys could result in a document which could no longer be opened. (reported by susannah) Change 9ea8ade65875868fb5dae43ee763575b9dc977ec by ni...@pr... (13 files): Add button to toolbar at top of Report Editor to toggle whether properties are sorted alphabetically. (#2239) Change e29c8b641ed1b589717d466caeead375ef8b3f81 by ni...@pr... (1 file): Fix TestTargetedMSMSTutorial (#2242) Fix TestTargetedMSMSTutorial and TestTargetedMSMSTutorialAsSmallMolecules by changing expected number of properties in the property sheet. Change 855eaf734958509785a5e6d2b4ffc247de87bb02 by mat...@gm... (12 files): * added support for parallelmode to SkylineTester including building chambm/always_up_runner for first time users and killing Docker workers when pressing "Stop" * added simple password hiding to KeyValueGridDlg (if key contains "password" so not really localized) * moved some TestRunner parallelization functions to TestRunnerLib so they can be used in SkylineTester * added CloseMainWindow() call for ProcessUtilites.Kill() to allow managed process to clean up gracefully (this was intended to let TestRunner clean up its own Docker workers but catching the "close window" event did not seem to work very well) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1965379&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-22 10:28:34
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Build ProteoWizard::BiblioSpec subset source tarball #1400 (0333b7ced26b697991f2c9b1a401ac55124d647b) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-03031a30a33de2af7 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1961120&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (3 changes) ==================================================== Change 0333b7ced26b697991f2c9b1a401ac55124d647b by ri...@uw... (11 files): Special ions annotations. (#2114) Special ions annotations. Change 2489f7acdd400a6cc539f09fc1da58ecf4c44a89 by ni...@uw... (3 files): Revert "Fix bug where removing an explicit modification from a document with decoys could result in a document which could no longer be opened. (reported by susannah)" This reverts commit d0a95aefae61c5b4b1027033f214447b9c08a39e. Change d0a95aefae61c5b4b1027033f214447b9c08a39e by ni...@uw... (3 files): Fix bug where removing an explicit modification from a document with decoys could result in a document which could no longer be opened. (reported by susannah) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1961120&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-19 22:33:02
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Build ProteoWizard::Core subset source tarball #4262 (bc7d301d43ed840a916dfbcf7f3a501323e04fda) successful Success. Agent: pwiz-linux-i-03ffaaad22521053a Build results: https://teamcity.labkey.org/viewLog.html?buildId=1957668&buildTypeId=bt81 Changes included (4 changes) ==================================================== Change bc7d301d43ed840a916dfbcf7f3a501323e04fda by mat...@gm... (5 files): - fixed xml_root_element to be able to handle XML files without an XML declaration "<?xml ...?>"; reported by Bruna - fixed scanSumming filter not to change times to seconds when calculating scan time for summed spectra; reported by Amey - changed scan number filter to fall back to index if there is no scan= in the nativeId * changed xml_root_element to throw a new exception type xml_root_error instead of runtime_error (finally I can ignore those exceptions when debugging without turning off all runtime_errors!) Change 755479ca6123bcf8fac1337993ed9597b8173362 by mat...@gm... (1 file): Change squash_on_demand to chambm/softfix Change bb448eac568ad175012809104704f7ec553815cf by bre...@us... (2 files): Skyline: Add option to pause for screenshots in the SkylineTester - Test tab (#2217) Change 0f18f4b6cd093fa474a929055afd6e7f93937b46 by bs...@pr... (8 files): Fixed a problem with FAIMS on MS2 data Skyline was not properly filtering for FAIMS in MS2 data, as in Thermo SureQuant, resulting in jagged chromatograms. Reported by user Arttu N.B. While developing this test I discovered that Share Minimized was leaving an empty .imsdb file when it should have had 2 entries due to mishandling of peptide modifications. Fixed that with Nick's help. see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1957668&buildTypeId=bt81 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-19 12:32:12
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Build ProteoWizard::BiblioSpec subset source tarball #1397 (2ce81cf170ab42afaea8f6fe62b330cc2006f124) successful Success. Agent: pwiz-linux-i-02ef968bea8ff393d Build results: https://teamcity.labkey.org/viewLog.html?buildId=1956560&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change 2ce81cf170ab42afaea8f6fe62b330cc2006f124 by bs...@pr... (2 files): Restore and improve my previous attempt at finding forms that aren't using FormEx, this time avoiding assemblies that aren't needed (and which can cause trouble due to brittle load order issues etc). (#2212) Also change the "WARNING: {test name} does not derive from AbstractUnitTest!" message in TestRunner to say "ERROR" = even though it doesn't actually show as an error in our test stats, it should be harder to ignore. see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1956560&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-19 12:30:46
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Build ProteoWizard::Core subset source tarball #4261 (2ce81cf170ab42afaea8f6fe62b330cc2006f124) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-0ae8e79e4f8064800 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1956562&buildTypeId=bt81 Changes included (1 change) ==================================================== Change 2ce81cf170ab42afaea8f6fe62b330cc2006f124 by bs...@pr... (2 files): Restore and improve my previous attempt at finding forms that aren't using FormEx, this time avoiding assemblies that aren't needed (and which can cause trouble due to brittle load order issues etc). (#2212) Also change the "WARNING: {test name} does not derive from AbstractUnitTest!" message in TestRunner to say "ERROR" = even though it doesn't actually show as an error in our test stats, it should be harder to ignore. see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1956562&buildTypeId=bt81 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-17 14:25:38
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Build ProteoWizard::BiblioSpec subset source tarball #1396 (fce104800508a4276b2d06d3b88da4bb5333c59b) failed Exit code 1 (Step: Command Line) (new). Agent: pwiz-linux-i-087b2b8700a345b97 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1952220&buildTypeId=BiblioSpecSubsetSourceTarball Changes included (1 change) ==================================================== Change fce104800508a4276b2d06d3b88da4bb5333c59b by 104...@us... (3 files): Skyline/work/20220815 redundant combobox efficient loading (#2208) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1952220&buildTypeId=BiblioSpecSubsetSourceTarball ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-16 23:47:21
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Build ProteoWizard::ProteoWizard and Skyline Docker container (Wine x86_64) #7738 (c15b08c19dbd24c435bf24b7bb28ded8d214a478) successful Tests passed: 485, muted: 2. Agent: pwiz-linux-i-079335a9ba078ee39 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1950659&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 Changes included (1 change) ==================================================== Change fce104800508a4276b2d06d3b88da4bb5333c59b by 104...@us... (3 files): Skyline/work/20220815 redundant combobox efficient loading (#2208) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1950659&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-16 01:04:24
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Build ProteoWizard::ProteoWizard and Skyline Docker container (Wine x86_64) #7720 (c15b08c19dbd24c435bf24b7bb28ded8d214a478) failed Exit code 1 (Step: Build container (Command Line)). Agent: pwiz-linux-i-04b3b3af0ef30a7e6 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1948947&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 Changes included (1 change) ==================================================== Change a07d9faba2c412b6a369a25adf6b5d5027bd81d3 by 523...@us... (10 files): Fixed BiblioSpec to allow getting the score type of .group files; fixed various library build grid issues (#2184) see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1948947&buildTypeId=ProteoWizardAndSkylineDockerContainerWineX8664 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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From: Buildmaster <bui...@la...> - 2022-08-16 00:21:51
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Build ProteoWizard::Core subset source tarball #4259 (a07d9faba2c412b6a369a25adf6b5d5027bd81d3) successful Success. Agent: pwiz-linux-i-05bac3c0981e5b409 Build results: https://teamcity.labkey.org/viewLog.html?buildId=1948953&buildTypeId=bt81 Changes included (2 changes) ==================================================== Change a07d9faba2c412b6a369a25adf6b5d5027bd81d3 by 523...@us... (10 files): Fixed BiblioSpec to allow getting the score type of .group files; fixed various library build grid issues (#2184) Change 9f1dc0f8545a3282511d8bdf2d2162d563fef030 by bs...@pr... (2 files): Back out code inspection test changes from commit e25e9f701a7510ad07edf7914eebc2dcae30a9bb, they were causing failures in perf tests due to interaction with Sciex DLL load order brittleness see more information about changed files: https://teamcity.labkey.org/viewLog.html?tab=buildChangesDiv&buildId=1948953&buildTypeId=bt81 ============================================================================ Configure email notifications: https://teamcity.labkey.org/profile.html?init=1&tab=userNotifications |
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