Activity for PomBase
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Midori Harris posted a comment on ticket #1770
This is one of the tickets that didn't make the move to GitHub. Please open a ticket...
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Valerie Wood posted a comment on ticket #1770
I'm not sure where we got to with this but can you remind me why this isn't possible:...
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Antonia Lock posted a comment on ticket #897
oh, Sourceforge
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I really really want this: PMID:25733668 summary Gene: geneX Genotype: genotypeX...
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missing "gene" in the navigation menu for single mutants
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gg
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OK I agree and it will be a long time before they all disappear. Comments need to...
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show TAS and NAS for admin users (us)
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deprioritise if it is a big thing?
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I still feel it would help to see them, is it a big thing to unhide them from logged...
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Yeah, I have this page bookmarked (in the bookmark toolbar so I can quickly click...
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Kim Rutherford posted a comment on ticket #703
I think there was another ticket about this at some point because I remember fixing...
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Done? Possibly, but I haven't actually changed any of the instructions about what...
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We now have an "Advanced" mode. We could add a list of genes on the side quite easily...
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Check for missing annotation extensions
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Yep, that isn't a problem anymore because the workflow has changed.
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There was a "download annotation" link in the past but I've managed to lose it in...
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SPAC1F5.04c FYPO:0001904 972 h- not available not available cdc12 14511538 looks...
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allele fixes
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make biogrid evidence code description visible via mouse over
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user interface: interaction evidence workflow
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Table loading is slow - especially the publication tables
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admin interface: Listing publications is slow
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exact duplicate https://sourceforge.net/p/pombase/curation-tool/561/
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also superseded by removing has_part links among "normal" terms in FYPO
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has_part is currently ignored https://sourceforge.net/p/pombase/curation-tool/77...
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change the way FYPO has_part links are followed in Canto
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change the way FYPO has_part links are followed in Canto
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Add a way to select curator for annotation in approval mode
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New curation type "protein localization dependency"
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add "back to summary" link button to genotype management page
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question about has_output /output_of
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maybe no action required, still on my list
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Show interaction direction in the annotation tables
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editing an allele in exisiting session
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streamline "add a new genotype"
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new annotation type: complementation
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allele selection, multiple options for the same allele
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IS this still current?
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ability to view 'upstream' terms
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Uniprot admin interface: add more categories to "reports"
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if a known allele description is added, prefil the name
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This would be quite nice. It would prevent people from adding the incorrect name...
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interactions gene and evidence code selection
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https://sourceforge.net/p/pombase/curation-tool/197/
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comment from https://sourceforge.net/p/pombase/curation-tool/671/ which I am closing...
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under consideration, show relationships in canto
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obvious-ify obsolete terms
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user interface: making GO curation easier (term ancestors)
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Done?
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user interface: Admin panel within curation sessions
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Show alleles from other sessions
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Text explanation on genotype management page
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I think so -- specific requested changes have been done, and further restructuring...
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Canto not showing existing annotations fully
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Closing as not reproducible, new ticket if anyone sees this
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Yes; it has always referred to the new interface.
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Accessing a paper by PMID
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existing annotations are showing as new
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Can this one close?
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Midori, Is this still relevant in new interface?
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Add ORCID to the name/email confirmation page
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gene quick links /interface improvements
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gene quick links /interface improvements
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Is this one still relevant, it may no longer be an issue.....
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possible to add 2 people with the same name different e-mail
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Add a page of ontology versions
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user interface: feedback to link to page where papers can be self selected
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show TAS and NAS for admin users (us)
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low priority as eventually these will all disappear...
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user interface: paper/session list for non-admin user?
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slightly revise test "resend session to curator e-mail"
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small tweak to reassigned e-mail
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closing as it seems unimportant
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user: small interface change (edit_genes)
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user interface: message to curators/ triage comment editable inside session
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QC: Check for missing evidence before allowing submission
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Fixed - completely my mistake. It just happened to work OK in Firefox. https://g...
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Strange edit behavour for term suggestion name and comment fields
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out of date? if not reopen....or new ticket
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show gene names and allele names on add-genotype page
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session admin: date session accepted
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make alleles from genotype details into a collapsible list
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I guess this is out of date...?
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Admin interface: Add PMID search option to admin front page
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session admin: quick: Add "reassigned sessions" to the daily summary
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QC: Check for missing evidence before allowing submission
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Is this still relevant ? Is it possible to have a canto annotation with no evide...
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admin interface: Listing publications is slow
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Allow editing of the "annotating curator" by admin
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Yep, but it's super low priority.
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We wanted to allow the admins to change the curator of an annotation. Mostly for...
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where do we see "triage comment'
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session admin: how to add view comment?
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ability to edit term suggestions
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No longer relevant, can edit term name and def
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sounds as though maybe this one can be closed ..Kim?
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new data types protein feature annotation etc
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yep, annoying, was going to submit this later ;)
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only seeing one of 8 annotation
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