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From: <al...@us...> - 2009-08-16 14:59:35
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Revision: 2011
http://obi.svn.sourceforge.net/obi/?rev=2011&view=rev
Author: alanr
Date: 2009-08-16 14:59:25 +0000 (Sun, 16 Aug 2009)
Log Message:
-----------
remove trailing "#" in XML base xml:base="http://www.obofoundry.org/ro/ro.owl"
Modified Paths:
--------------
trunk/src/ontology/external/ro.owl
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From: <al...@us...> - 2009-08-16 14:36:30
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Revision: 2010
http://obi.svn.sourceforge.net/obi/?rev=2010&view=rev
Author: alanr
Date: 2009-08-16 14:36:21 +0000 (Sun, 16 Aug 2009)
Log Message:
-----------
This release based on the merged file
Removed Paths:
-------------
releases/2009-07-31/branches/AnnotationProperty.owl
releases/2009-07-31/branches/Biomaterial.owl
releases/2009-07-31/branches/DataFormatSpecification.owl
releases/2009-07-31/branches/DataTransformation.owl
releases/2009-07-31/branches/DigitalEntityPlus.owl
releases/2009-07-31/branches/InstrumentAndPart.owl
releases/2009-07-31/branches/OBI-Function.owl
releases/2009-07-31/branches/Obsolete.owl
releases/2009-07-31/branches/PlanAndPlannedProcess.owl
releases/2009-07-31/branches/Quality.owl
releases/2009-07-31/branches/Relations.owl
releases/2009-07-31/branches/Role.owl
releases/2009-07-31/branches/instances/
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From: <al...@us...> - 2009-08-15 10:57:53
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Revision: 2009
http://obi.svn.sourceforge.net/obi/?rev=2009&view=rev
Author: alanr
Date: 2009-08-15 10:57:43 +0000 (Sat, 15 Aug 2009)
Log Message:
-----------
so I can cite
Added Paths:
-----------
trunk/src/ontology/spreadsheets/in/efo-disease-state-terms.txt
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From: <al...@us...> - 2009-08-14 22:26:04
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Revision: 2008
http://obi.svn.sourceforge.net/obi/?rev=2008&view=rev
Author: alanr
Date: 2009-08-14 22:25:57 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
tag right after the merge
Added Paths:
-----------
tags/after-branches-merge-2009-08-14/
tags/after-branches-merge-2009-08-14/branches/
tags/after-branches-merge-2009-08-14/external/
Removed Paths:
-------------
tags/after-branches-merge-2009-08-14/branches/merged/
tags/after-branches-merge-2009-08-14/branches/obi-lsw.owl.template
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From: <al...@us...> - 2009-08-14 22:20:12
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Revision: 2007
http://obi.svn.sourceforge.net/obi/?rev=2007&view=rev
Author: alanr
Date: 2009-08-14 22:20:05 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
one last obsolete file?
Removed Paths:
-------------
trunk/src/ontology/branches/obi-lsw.owl.template
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From: <al...@us...> - 2009-08-14 22:19:38
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Revision: 2006
http://obi.svn.sourceforge.net/obi/?rev=2006&view=rev
Author: alanr
Date: 2009-08-14 22:19:30 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
remove remnants of merged directory
Removed Paths:
-------------
trunk/src/ontology/branches/merged/
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From: <al...@us...> - 2009-08-14 22:18:57
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Revision: 2005
http://obi.svn.sourceforge.net/obi/?rev=2005&view=rev
Author: alanr
Date: 2009-08-14 22:18:50 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
obsolete .obo
Removed Paths:
-------------
trunk/src/ontology/branches/obi.obo
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From: <al...@us...> - 2009-08-14 22:18:16
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Revision: 2004
http://obi.svn.sourceforge.net/obi/?rev=2004&view=rev
Author: alanr
Date: 2009-08-14 22:18:09 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
templates
Modified Paths:
--------------
trunk/src/ontology/branches/obi.pprj.template
Added Paths:
-----------
trunk/src/ontology/branches/obi.repository.template
Removed Paths:
-------------
trunk/src/ontology/branches/obi-quick-id.owl
trunk/src/ontology/branches/obi.repository
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From: <al...@us...> - 2009-08-14 22:16:45
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Revision: 2003
http://obi.svn.sourceforge.net/obi/?rev=2003&view=rev
Author: alanr
Date: 2009-08-14 22:16:29 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
remove some more old stuff
Removed Paths:
-------------
trunk/src/ontology/branches/DataFormatSpecification.owl
trunk/src/ontology/branches/OBI-Function.owl
trunk/src/ontology/branches/instances/
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From: <al...@us...> - 2009-08-14 22:15:37
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Revision: 2002
http://obi.svn.sourceforge.net/obi/?rev=2002&view=rev
Author: alanr
Date: 2009-08-14 22:15:25 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
maybe all merged
Modified Paths:
--------------
trunk/src/ontology/branches/externalDerived.owl
Added Paths:
-----------
trunk/src/ontology/branches/obi.repository
Removed Paths:
-------------
trunk/src/ontology/branches/obi.owl.template
trunk/src/ontology/branches/obi.repository.template
trunk/src/ontology/branches/obid.owl
trunk/src/ontology/branches/obidi.owl
trunk/src/ontology/branches/obil.owl
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From: <al...@us...> - 2009-08-14 22:09:07
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Revision: 2001
http://obi.svn.sourceforge.net/obi/?rev=2001&view=rev
Author: alanr
Date: 2009-08-14 22:08:51 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
3/4 to merge
Added Paths:
-----------
trunk/src/ontology/branches/obi.owl
trunk/src/ontology/branches/obim.owl
trunk/src/ontology/branches/obimd.owl
trunk/src/ontology/branches/obimi.owl
Removed Paths:
-------------
trunk/src/ontology/branches/merged/obi.owl
trunk/src/ontology/branches/merged/obim.owl
trunk/src/ontology/branches/merged/obimd.owl
trunk/src/ontology/branches/merged/obimi.owl
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From: <al...@us...> - 2009-08-14 22:02:33
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Revision: 2000
http://obi.svn.sourceforge.net/obi/?rev=2000&view=rev
Author: alanr
Date: 2009-08-14 22:02:24 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
halfway to merge
Added Paths:
-----------
trunk/src/ontology/branches/merged/
Removed Paths:
-------------
trunk/src/ontology/branches/AnnotationProperty.owl
trunk/src/ontology/branches/Biomaterial.owl
trunk/src/ontology/branches/DataTransformation.owl
trunk/src/ontology/branches/DigitalEntityPlus.owl
trunk/src/ontology/branches/InstrumentAndPart.owl
trunk/src/ontology/branches/Obsolete.owl
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
trunk/src/ontology/branches/Quality.owl
trunk/src/ontology/branches/Relations.owl
trunk/src/ontology/branches/Role.owl
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From: <al...@us...> - 2009-08-14 21:59:31
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Revision: 1999
http://obi.svn.sourceforge.net/obi/?rev=1999&view=rev
Author: alanr
Date: 2009-08-14 21:59:22 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
tag before merge
Added Paths:
-----------
tags/before-branches-merge-2009-08-13/
tags/before-branches-merge-2009-08-13/branches/
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From: <al...@us...> - 2009-08-14 21:55:39
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Revision: 1998
http://obi.svn.sourceforge.net/obi/?rev=1998&view=rev
Author: alanr
Date: 2009-08-14 21:55:32 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
get rid of messed character encodings - hexdump -c obi.owl| grep -B 2 ' [0-9][0-9][0-9]'
Modified Paths:
--------------
releases/2009-07-31/merged/obi.owl
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From: <al...@us...> - 2009-08-14 12:33:57
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Revision: 1997
http://obi.svn.sourceforge.net/obi/?rev=1997&view=rev
Author: alanr
Date: 2009-08-14 12:33:48 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
Move MeDIP-SEQ assay under DNA Sequencing
Modified Paths:
--------------
releases/2009-07-31/merged/obi.owl
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From: <al...@us...> - 2009-08-14 07:10:28
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Revision: 1996
http://obi.svn.sourceforge.net/obi/?rev=1996&view=rev
Author: alanr
Date: 2009-08-14 07:10:16 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
added back annotation properties
Modified Paths:
--------------
releases/2009-07-31/branches/externalDerived.owl
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From: <al...@us...> - 2009-08-14 07:04:28
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Revision: 1995
http://obi.svn.sourceforge.net/obi/?rev=1995&view=rev
Author: alanr
Date: 2009-08-14 07:04:22 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
add iao import
Modified Paths:
--------------
trunk/src/examples/development/concentration-demoed-vancouver-2009.owl
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From: <al...@us...> - 2009-08-14 07:04:07
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Revision: 1994
http://obi.svn.sourceforge.net/obi/?rev=1994&view=rev
Author: alanr
Date: 2009-08-14 07:03:55 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
obofoundry -> obolibary
Modified Paths:
--------------
trunk/src/examples/development/concentration-alanr.owl
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From: <al...@us...> - 2009-08-14 07:02:47
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Revision: 1993
http://obi.svn.sourceforge.net/obi/?rev=1993&view=rev
Author: alanr
Date: 2009-08-14 07:02:37 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
add ontie pointers
Modified Paths:
--------------
releases/2009-07-31/merged/obi.repository
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From: <al...@us...> - 2009-08-14 06:50:04
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Revision: 1992
http://obi.svn.sourceforge.net/obi/?rev=1992&view=rev
Author: alanr
Date: 2009-08-14 06:49:48 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
obi + ontie not! Has some RO stuff in it, plus use of obsolete properties
Added Paths:
-----------
releases/2009-07-31/merged/obi+ontie-not.owl
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From: <al...@us...> - 2009-08-14 06:49:05
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Revision: 1991
http://obi.svn.sourceforge.net/obi/?rev=1991&view=rev
Author: alanr
Date: 2009-08-14 06:48:58 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
ontie external files
Added Paths:
-----------
releases/2009-07-31/branches/obi-ontie-external.owl
releases/2009-07-31/branches/ontie-external.owl
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From: <mco...@us...> - 2009-08-14 05:50:38
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Revision: 1989
http://obi.svn.sourceforge.net/obi/?rev=1989&view=rev
Author: mcourtot
Date: 2009-08-14 04:23:47 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
removed duplicate annotation properties for:
PATO_0001238
PATO_0001237
CHEBI_23367
CHEBI_16670
Modified Paths:
--------------
trunk/src/ontology/branches/externalDerived.owl
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From: <mco...@us...> - 2009-08-14 04:27:28
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Revision: 1990
http://obi.svn.sourceforge.net/obi/?rev=1990&view=rev
Author: mcourtot
Date: 2009-08-14 04:27:20 +0000 (Fri, 14 Aug 2009)
Log Message:
-----------
propagation removal duplicate annotation properties:
PATO_0001238
PATO_0001237
CHEBI_23367
CHEBI_16670
Modified Paths:
--------------
releases/2009-07-31/branches/externalDerived.owl
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From: <al...@us...> - 2009-08-13 16:51:06
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Revision: 1988
http://obi.svn.sourceforge.net/obi/?rev=1988&view=rev
Author: alanr
Date: 2009-08-13 16:50:57 +0000 (Thu, 13 Aug 2009)
Log Message:
-----------
remove therest.owl
Modified Paths:
--------------
trunk/src/tools/build/create-external-derived.lisp
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From: <al...@us...> - 2009-08-13 15:44:49
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Revision: 1987
http://obi.svn.sourceforge.net/obi/?rev=1987&view=rev
Author: alanr
Date: 2009-08-13 15:44:42 +0000 (Thu, 13 Aug 2009)
Log Message:
-----------
add missing definition
Modified Paths:
--------------
trunk/src/tools/build/rewrite-instances.lisp
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