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From: <jam...@us...> - 2009-10-20 22:23:20
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Revision: 2286
http://obi.svn.sourceforge.net/obi/?rev=2286&view=rev
Author: jamesmalone
Date: 2009-10-20 22:23:09 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
Phil and James start of discussion section for manuscript - DO NOT EDIT this is temporary
Added Paths:
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trunk/docs/papers/release/temp_Discussion_OBI.doc
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From: <mco...@us...> - 2009-10-20 22:22:07
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Revision: 2285
http://obi.svn.sourceforge.net/obi/?rev=2285&view=rev
Author: mcourtot
Date: 2009-10-20 22:21:58 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
updated definition of interpreting data as per Jennifer's update: "the process of evaluating the data gathered in an investigation in the context of literature knowledge with the objective to generate more general conclusions or to identify what additional data is necessary to draw conclusions"
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <mco...@us...> - 2009-10-20 22:17:24
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Revision: 2284
http://obi.svn.sourceforge.net/obi/?rev=2284&view=rev
Author: mcourtot
Date: 2009-10-20 22:17:13 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
recreated the external files now that template/neurocommons is fixed
repaired GO_007596 to GO_0007596 blood coagulation
CHEBI_32142, sodium citrate, moved to external-by-hand (finally, grml)
Modified Paths:
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trunk/src/ontology/branches/external-byhand.owl
trunk/src/ontology/branches/external.owl
trunk/src/ontology/branches/externalDerived.owl
trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-10-20 22:13:39
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Revision: 2283
http://obi.svn.sourceforge.net/obi/?rev=2283&view=rev
Author: parkinso
Date: 2009-10-20 22:13:25 +0000 (Tue, 20 Oct 2009)
Log Message:
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reviewing cur status for manuscript. up to assay. Note defered some to come back to tomorrow. Still probs with the processed material - if we remove these restrictions then reasons in real time p4. HP
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <jam...@us...> - 2009-10-20 20:55:42
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Revision: 2282
http://obi.svn.sourceforge.net/obi/?rev=2282&view=rev
Author: jamesmalone
Date: 2009-10-20 20:55:35 +0000 (Tue, 20 Oct 2009)
Log Message:
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Completion of clean-up of use case 3, start on organising discussion section (headings are for organisation guidance only)
Modified Paths:
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trunk/docs/papers/release/Release-Manuscript-Master-resurrected.doc
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From: <mco...@us...> - 2009-10-20 20:22:23
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Revision: 2281
http://obi.svn.sourceforge.net/obi/?rev=2281&view=rev
Author: mcourtot
Date: 2009-10-20 20:22:14 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
added graph names to not re import annotation values from OBI when trying to update OBI :)
Modified Paths:
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trunk/src/tools/build/external-templates.txt
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From: <bjo...@us...> - 2009-10-20 19:16:54
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Revision: 2280
http://obi.svn.sourceforge.net/obi/?rev=2280&view=rev
Author: bjoernpeters
Date: 2009-10-20 19:16:42 +0000 (Tue, 20 Oct 2009)
Log Message:
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until patent. only minor changes in this file; needs further updates
Modified Paths:
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trunk/docs/papers/release/OBITerm-ids.xls
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From: <bjo...@us...> - 2009-10-20 19:15:55
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Revision: 2279
http://obi.svn.sourceforge.net/obi/?rev=2279&view=rev
Author: bjoernpeters
Date: 2009-10-20 19:15:48 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
done with patent
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <ph...@us...> - 2009-10-20 19:15:42
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Revision: 2278
http://obi.svn.sourceforge.net/obi/?rev=2278&view=rev
Author: phillip
Date: 2009-10-20 19:15:30 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
English check to end of use case 2
Modified Paths:
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trunk/docs/papers/release/Release-Manuscript-Master-resurrected.doc
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From: <bjo...@us...> - 2009-10-20 18:35:36
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Revision: 2277
http://obi.svn.sourceforge.net/obi/?rev=2277&view=rev
Author: bjoernpeters
Date: 2009-10-20 18:35:29 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
done with blood specimen
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <ph...@us...> - 2009-10-20 18:30:57
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Revision: 2276
http://obi.svn.sourceforge.net/obi/?rev=2276&view=rev
Author: phillip
Date: 2009-10-20 18:30:45 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
English check to end of organisation
Modified Paths:
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trunk/docs/papers/release/Release-Manuscript-Master-resurrected.doc
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From: <bjo...@us...> - 2009-10-20 18:17:19
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Revision: 2275
http://obi.svn.sourceforge.net/obi/?rev=2275&view=rev
Author: bjoernpeters
Date: 2009-10-20 18:17:07 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
specimen and specimen role done
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-10-20 17:49:03
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Revision: 2274
http://obi.svn.sourceforge.net/obi/?rev=2274&view=rev
Author: bjoernpeters
Date: 2009-10-20 17:48:56 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
finalized retiring uses of device, obsoleted class.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-10-20 17:31:42
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Revision: 2273
http://obi.svn.sourceforge.net/obi/?rev=2273&view=rev
Author: bjoernpeters
Date: 2009-10-20 17:31:32 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
retiring
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-10-20 16:41:32
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Revision: 2272
http://obi.svn.sourceforge.net/obi/?rev=2272&view=rev
Author: bjoernpeters
Date: 2009-10-20 16:41:18 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
done with calibration substance role (and dependent terms)
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <ph...@us...> - 2009-10-20 16:40:16
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Revision: 2271
http://obi.svn.sourceforge.net/obi/?rev=2271&view=rev
Author: phillip
Date: 2009-10-20 16:40:10 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
English check to end of process
Modified Paths:
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trunk/docs/papers/release/Release-Manuscript-Master-resurrected.doc
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From: <al...@us...> - 2009-10-20 15:50:16
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Revision: 2270
http://obi.svn.sourceforge.net/obi/?rev=2270&view=rev
Author: alanr
Date: 2009-10-20 15:50:09 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
updated to remove stuff moved to obi
Modified Paths:
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trunk/src/ontology/branches/investigation-use-case.lisp
trunk/src/ontology/branches/investigation-use-case.owl
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From: <bjo...@us...> - 2009-10-20 15:35:47
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Revision: 2269
http://obi.svn.sourceforge.net/obi/?rev=2269&view=rev
Author: bjoernpeters
Date: 2009-10-20 15:35:40 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <al...@us...> - 2009-10-20 13:55:18
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Revision: 2268
http://obi.svn.sourceforge.net/obi/?rev=2268&view=rev
Author: alanr
Date: 2009-10-20 13:55:12 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
some curation status for fucoidan
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <dir...@us...> - 2009-10-20 00:50:37
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Revision: 2267
http://obi.svn.sourceforge.net/obi/?rev=2267&view=rev
Author: dirkderom
Date: 2009-10-20 00:50:31 +0000 (Tue, 20 Oct 2009)
Log Message:
-----------
New version of neuroscience use case (jpg, vsdx)
Modified Paths:
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trunk/docs/papers/JBMS_2009/Dirk_use case v2.vdx
trunk/docs/papers/JBMS_2009/Dirk_use_case_v1.jpg
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From: <bjo...@us...> - 2009-10-19 22:16:34
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Revision: 2266
http://obi.svn.sourceforge.net/obi/?rev=2266&view=rev
Author: bjoernpeters
Date: 2009-10-19 22:16:27 +0000 (Mon, 19 Oct 2009)
Log Message:
-----------
Modified Paths:
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trunk/docs/papers/release/OBITerm-ids.xls
trunk/src/ontology/branches/obi.owl
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From: <ph...@us...> - 2009-10-19 21:06:05
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Revision: 2265
http://obi.svn.sourceforge.net/obi/?rev=2265&view=rev
Author: phillip
Date: 2009-10-19 21:05:53 +0000 (Mon, 19 Oct 2009)
Log Message:
-----------
Removed erroroneous commit
Removed Paths:
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trunk/docs/papers/release/Release-Manuscript-MasteUC5r.doc
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From: <jam...@us...> - 2009-10-19 21:05:14
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Revision: 2264
http://obi.svn.sourceforge.net/obi/?rev=2264&view=rev
Author: jamesmalone
Date: 2009-10-19 21:05:07 +0000 (Mon, 19 Oct 2009)
Log Message:
-----------
additional DT classes, some restriction fixes
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <ph...@us...> - 2009-10-19 21:04:56
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Revision: 2263
http://obi.svn.sourceforge.net/obi/?rev=2263&view=rev
Author: phillip
Date: 2009-10-19 21:04:45 +0000 (Mon, 19 Oct 2009)
Log Message:
-----------
Removed minor duplication
Modified Paths:
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trunk/docs/papers/release/Release-Manuscript-Master-resurrected.doc
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From: <jen...@us...> - 2009-10-19 21:02:53
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Revision: 2262
http://obi.svn.sourceforge.net/obi/?rev=2262&view=rev
Author: jenfostel
Date: 2009-10-19 21:02:46 +0000 (Mon, 19 Oct 2009)
Log Message:
-----------
Integrated changes to Use Case 3
Modified Paths:
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trunk/docs/papers/release/Release-Manuscript-Master-resurrected.doc
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