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From: <sto...@us...> - 2016-01-25 19:34:45
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Revision: 4038
http://sourceforge.net/p/obi/code/4038
Author: stoeckert
Date: 2016-01-25 19:34:43 +0000 (Mon, 25 Jan 2016)
Log Message:
-----------
tracker item 773, updated annotation properties for biobank terms
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <sto...@us...> - 2016-01-11 18:27:00
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Revision: 4037
http://sourceforge.net/p/obi/code/4037
Author: stoeckert
Date: 2016-01-11 18:26:59 +0000 (Mon, 11 Jan 2016)
Log Message:
-----------
tracker items 790
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <sto...@us...> - 2016-01-11 16:52:33
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Revision: 4036
http://sourceforge.net/p/obi/code/4036
Author: stoeckert
Date: 2016-01-11 16:52:32 +0000 (Mon, 11 Jan 2016)
Log Message:
-----------
tracker items 792 and 793
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <jzh...@us...> - 2015-12-23 18:59:29
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Revision: 4035
http://sourceforge.net/p/obi/code/4035
Author: jzheng24
Date: 2015-12-23 18:59:27 +0000 (Wed, 23 Dec 2015)
Log Message:
-----------
Add high resolution Figure 1 and Figure 4
Added Paths:
-----------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 1.tif
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 4.tiff
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From: <bjo...@us...> - 2015-12-20 22:34:47
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Revision: 4034
http://sourceforge.net/p/obi/code/4034
Author: bjoernpeters
Date: 2015-12-20 22:34:46 +0000 (Sun, 20 Dec 2015)
Log Message:
-----------
Modified Paths:
--------------
trunk/docs/papers/release/2015 PLoS ONE submission/Manuscript 2015.doc
Added Paths:
-----------
trunk/docs/papers/release/2015 PLoS ONE submission/Cover letter.docx
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From: <bjo...@us...> - 2015-12-20 22:33:23
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Revision: 4033
http://sourceforge.net/p/obi/code/4033
Author: bjoernpeters
Date: 2015-12-20 22:33:22 +0000 (Sun, 20 Dec 2015)
Log Message:
-----------
Modified Paths:
--------------
trunk/docs/papers/release/2015 PLoS ONE submission/Supplemental Table 1.xlsx
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From: <bjo...@us...> - 2015-12-20 22:20:38
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Revision: 4032
http://sourceforge.net/p/obi/code/4032
Author: bjoernpeters
Date: 2015-12-20 22:20:36 +0000 (Sun, 20 Dec 2015)
Log Message:
-----------
Modified Paths:
--------------
trunk/docs/papers/release/2015 PLoS ONE submission/Manuscript 2015.doc
trunk/docs/papers/release/2015 PLoS ONE submission/Supplemental Table 1.xlsx
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From: <p_r...@us...> - 2015-12-16 10:21:31
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Revision: 4031
http://sourceforge.net/p/obi/code/4031
Author: p_rocca_serra
Date: 2015-12-16 10:21:30 +0000 (Wed, 16 Dec 2015)
Log Message:
-----------
new high resolution files for figure 5 (obi used in ISA), available as pdf,png,tiff,pptx and keynote files (once more)
Added Paths:
-----------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 5-new.key
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 5-new.pdf
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 5-new.png
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 5-new.pptx
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 5-new.tiff
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From: <p_r...@us...> - 2015-12-16 10:16:27
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Revision: 4030
http://sourceforge.net/p/obi/code/4030
Author: p_rocca_serra
Date: 2015-12-16 10:16:25 +0000 (Wed, 16 Dec 2015)
Log Message:
-----------
new high resolution files for figure 5 (obi used in ISA), available as pdf,png,tiff,pptx and keynote files
Modified Paths:
--------------
trunk/docs/papers/release/Figure 5.ppt
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From: <jam...@us...> - 2015-12-15 20:45:10
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Revision: 4029
http://sourceforge.net/p/obi/code/4029
Author: jamesaoverton
Date: 2015-12-15 20:45:07 +0000 (Tue, 15 Dec 2015)
Log Message:
-----------
Committing OBI release 2015-12-07
Added Paths:
-----------
releases/2015-12-07/
releases/2015-12-07/README.txt
releases/2015-12-07/branches/
releases/2015-12-07/branches/OntoFox_inputs/
releases/2015-12-07/branches/OntoFox_inputs/ChEBI_input.txt
releases/2015-12-07/branches/OntoFox_inputs/GO_input.txt
releases/2015-12-07/branches/OntoFox_inputs/NCBITaxon_input.txt
releases/2015-12-07/branches/OntoFox_inputs/OBO_input.txt
releases/2015-12-07/branches/OntoFox_inputs/PATO_input.txt
releases/2015-12-07/branches/OntoFox_inputs/SO_input.txt
releases/2015-12-07/branches/OntoFox_inputs/UO_input.txt
releases/2015-12-07/branches/OntoFox_inputs/UO_input_instance.txt
releases/2015-12-07/branches/OntoFox_inputs/readme.txt
releases/2015-12-07/branches/OntoFox_outputs/
releases/2015-12-07/branches/OntoFox_outputs/ChEBI_imports.owl
releases/2015-12-07/branches/OntoFox_outputs/GO_imports.owl
releases/2015-12-07/branches/OntoFox_outputs/NCBITaxon_imports.owl
releases/2015-12-07/branches/OntoFox_outputs/OBO_imports.owl
releases/2015-12-07/branches/OntoFox_outputs/PATO_imports.owl
releases/2015-12-07/branches/OntoFox_outputs/SO_imports.owl
releases/2015-12-07/branches/OntoFox_outputs/UO_imports.owl
releases/2015-12-07/branches/OntoFox_outputs/UO_instance_imports.owl
releases/2015-12-07/branches/catalog-v001.xml
releases/2015-12-07/branches/doap.template
releases/2015-12-07/branches/external-byhand.owl
releases/2015-12-07/branches/modules/
releases/2015-12-07/branches/modules/epitope-assays.owl
releases/2015-12-07/branches/modules/midlevel-assays.owl
releases/2015-12-07/branches/modules/obsolete.owl
releases/2015-12-07/branches/obi.owl
releases/2015-12-07/branches/templates/
releases/2015-12-07/branches/templates/epitope-assays.tsv
releases/2015-12-07/branches/templates/midlevel-assays.tsv
releases/2015-12-07/branches/templates/obsolete.tsv
releases/2015-12-07/docs/
releases/2015-12-07/docs/obi.tsv
releases/2015-12-07/docs/obi.txt
releases/2015-12-07/docs/obi_core.tsv
releases/2015-12-07/docs/obi_core.txt
releases/2015-12-07/docs/obi_iedb.tsv
releases/2015-12-07/docs/obi_iedb.txt
releases/2015-12-07/docs/obi_isa.tsv
releases/2015-12-07/docs/obi_isa.txt
releases/2015-12-07/obi.owl
releases/2015-12-07/obi_core.owl
releases/2015-12-07/obi_iedb.owl
releases/2015-12-07/obi_isa.owl
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From: <sto...@us...> - 2015-12-14 21:43:35
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Revision: 4028
http://sourceforge.net/p/obi/code/4028
Author: stoeckert
Date: 2015-12-14 21:43:34 +0000 (Mon, 14 Dec 2015)
Log Message:
-----------
tracker item 789
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
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From: <bjo...@us...> - 2015-12-14 18:58:38
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Revision: 4027
http://sourceforge.net/p/obi/code/4027
Author: bjoernpeters
Date: 2015-12-14 18:58:37 +0000 (Mon, 14 Dec 2015)
Log Message:
-----------
Added term request https://sourceforge.net/p/obi/obi-terms/789/
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2015-12-11 18:51:03
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Revision: 4026
http://sourceforge.net/p/obi/code/4026
Author: bjoernpeters
Date: 2015-12-11 18:51:02 +0000 (Fri, 11 Dec 2015)
Log Message:
-----------
Adding Philippe's low resolution Figure 5
Added Paths:
-----------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 5.jpg
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From: <bjo...@us...> - 2015-12-11 17:28:45
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Revision: 4025
http://sourceforge.net/p/obi/code/4025
Author: bjoernpeters
Date: 2015-12-11 17:28:44 +0000 (Fri, 11 Dec 2015)
Log Message:
-----------
Removed Figures from main file. Finalized formatting.
Modified Paths:
--------------
trunk/docs/papers/release/2015 PLoS ONE submission/Manuscript 2015.doc
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From: <bjo...@us...> - 2015-12-11 17:17:02
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Revision: 4024
http://sourceforge.net/p/obi/code/4024
Author: bjoernpeters
Date: 2015-12-11 17:17:00 +0000 (Fri, 11 Dec 2015)
Log Message:
-----------
Updated citations; formatted for PLoS ONE; moved textbox in methods (not allowed); removed supplemntal table 2 (not updated; too late to fix)
Modified Paths:
--------------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 3.pptx
trunk/docs/papers/release/2015 PLoS ONE submission/Manuscript 2015.doc
trunk/docs/papers/release/2015 PLoS ONE submission/Supplemental Table 1.xlsx
Added Paths:
-----------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 3.png
trunk/docs/papers/release/Supplemental Table 2.xls
Removed Paths:
-------------
trunk/docs/papers/release/2015 PLoS ONE submission/Supplemental Table 2.xls
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From: <bjo...@us...> - 2015-12-11 14:44:09
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Revision: 4023
http://sourceforge.net/p/obi/code/4023
Author: bjoernpeters
Date: 2015-12-11 14:44:07 +0000 (Fri, 11 Dec 2015)
Log Message:
-----------
manuscript updates from Ryan, Chris and Jie
Modified Paths:
--------------
trunk/docs/papers/release/2015 PLoS ONE submission/Manuscript 2015.doc
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From: <jam...@us...> - 2015-12-07 20:27:54
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Revision: 4022
http://sourceforge.net/p/obi/code/4022
Author: jamesaoverton
Date: 2015-12-07 20:27:53 +0000 (Mon, 07 Dec 2015)
Log Message:
-----------
Add newID sheet listing 10 new terms
Added Paths:
-----------
trunk/src/ontology/spreadsheets/new_ids/newIDs_20151203.tab
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From: <sto...@us...> - 2015-12-03 18:16:48
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Revision: 4021
http://sourceforge.net/p/obi/code/4021
Author: stoeckert
Date: 2015-12-03 18:16:46 +0000 (Thu, 03 Dec 2015)
Log Message:
-----------
infection from IDO
Modified Paths:
--------------
trunk/src/ontology/branches/OntoFox_inputs/OBO_input.txt
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From: <sto...@us...> - 2015-12-03 18:15:43
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Revision: 4020
http://sourceforge.net/p/obi/code/4020
Author: stoeckert
Date: 2015-12-03 18:15:42 +0000 (Thu, 03 Dec 2015)
Log Message:
-----------
infection from IDO
Modified Paths:
--------------
trunk/src/ontology/branches/OntoFox_outputs/OBO_imports.owl
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From: <sto...@us...> - 2015-12-03 18:14:28
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Revision: 4019
http://sourceforge.net/p/obi/code/4019
Author: stoeckert
Date: 2015-12-03 18:14:27 +0000 (Thu, 03 Dec 2015)
Log Message:
-----------
infection #787
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <sto...@us...> - 2015-12-01 18:31:03
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Revision: 4018
http://sourceforge.net/p/obi/code/4018
Author: stoeckert
Date: 2015-12-01 18:31:01 +0000 (Tue, 01 Dec 2015)
Log Message:
-----------
tracker items 783, 788
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <sto...@us...> - 2015-11-24 17:43:51
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Revision: 4017
http://sourceforge.net/p/obi/code/4017
Author: stoeckert
Date: 2015-11-24 17:43:48 +0000 (Tue, 24 Nov 2015)
Log Message:
-----------
tracker items 781, 782
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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From: <jzh...@us...> - 2015-11-23 00:26:34
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Revision: 4016
http://sourceforge.net/p/obi/code/4016
Author: jzheng24
Date: 2015-11-23 00:26:33 +0000 (Mon, 23 Nov 2015)
Log Message:
-----------
replace Figure 4.tiff by Figure 4.png with high resolution
Added Paths:
-----------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 4.png
Removed Paths:
-------------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 4.tiff
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From: <jzh...@us...> - 2015-11-23 00:13:02
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Revision: 4015
http://sourceforge.net/p/obi/code/4015
Author: jzheng24
Date: 2015-11-23 00:13:01 +0000 (Mon, 23 Nov 2015)
Log Message:
-----------
Figure 4
Added Paths:
-----------
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 4.dia
trunk/docs/papers/release/2015 PLoS ONE submission/Figure 4.tiff
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From: <jzh...@us...> - 2015-11-18 17:31:03
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Revision: 4014
http://sourceforge.net/p/obi/code/4014
Author: jzheng24
Date: 2015-11-18 17:31:02 +0000 (Wed, 18 Nov 2015)
Log Message:
-----------
Correct setting of 'has curation status' annotation Property
Add terms request by biobank and associated tracker: https://sourceforge.net/p/obi/obi-terms/778/
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl
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