Menu
▾
▴
obi-svn-commit — Mailing list to receive notices of commits to the OBI SVN.
You can subscribe to this list here.
| 2007 |
Jan
|
Feb
|
Mar
|
Apr
(3) |
May
(6) |
Jun
(29) |
Jul
(37) |
Aug
(20) |
Sep
(9) |
Oct
(24) |
Nov
(14) |
Dec
(39) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2008 |
Jan
(61) |
Feb
(64) |
Mar
(118) |
Apr
(92) |
May
(130) |
Jun
(106) |
Jul
(86) |
Aug
(32) |
Sep
(65) |
Oct
(126) |
Nov
(125) |
Dec
(82) |
| 2009 |
Jan
(118) |
Feb
(99) |
Mar
(140) |
Apr
(30) |
May
(25) |
Jun
(43) |
Jul
(152) |
Aug
(130) |
Sep
(43) |
Oct
(285) |
Nov
(214) |
Dec
(96) |
| 2010 |
Jan
(44) |
Feb
(26) |
Mar
(143) |
Apr
(24) |
May
(36) |
Jun
(42) |
Jul
(12) |
Aug
(29) |
Sep
(7) |
Oct
(24) |
Nov
(6) |
Dec
(27) |
| 2011 |
Jan
(4) |
Feb
(6) |
Mar
(28) |
Apr
(37) |
May
(27) |
Jun
(25) |
Jul
(68) |
Aug
(14) |
Sep
(8) |
Oct
(36) |
Nov
(10) |
Dec
(33) |
| 2012 |
Jan
(56) |
Feb
(14) |
Mar
(32) |
Apr
(22) |
May
(35) |
Jun
(41) |
Jul
(66) |
Aug
(1) |
Sep
(7) |
Oct
(6) |
Nov
(6) |
Dec
(4) |
| 2013 |
Jan
(9) |
Feb
(5) |
Mar
(21) |
Apr
(18) |
May
(24) |
Jun
(33) |
Jul
(4) |
Aug
(7) |
Sep
(17) |
Oct
(50) |
Nov
(18) |
Dec
(10) |
| 2014 |
Jan
(1) |
Feb
(3) |
Mar
(12) |
Apr
(2) |
May
(2) |
Jun
(2) |
Jul
|
Aug
(4) |
Sep
(2) |
Oct
(1) |
Nov
(3) |
Dec
(9) |
| 2015 |
Jan
(6) |
Feb
(2) |
Mar
(15) |
Apr
(2) |
May
(5) |
Jun
(4) |
Jul
(2) |
Aug
(5) |
Sep
(8) |
Oct
(3) |
Nov
(9) |
Dec
(18) |
| 2016 |
Jan
(3) |
Feb
(2) |
Mar
(15) |
Apr
(1) |
May
(4) |
Jun
(10) |
Jul
(2) |
Aug
(2) |
Sep
(5) |
Oct
(5) |
Nov
|
Dec
|
| 2017 |
Jan
(4) |
Feb
|
Mar
|
Apr
|
May
|
Jun
|
Jul
|
Aug
|
Sep
|
Oct
|
Nov
|
Dec
|
|
From: <bjo...@us...> - 2008-11-02 20:10:31
|
Revision: 1113
http://obi.svn.sourceforge.net/obi/?rev=1113&view=rev
Author: bjoernpeters
Date: 2008-11-02 20:10:28 +0000 (Sun, 02 Nov 2008)
Log Message:
-----------
Added Paths:
-----------
trunk/docs/papers/release/
trunk/docs/papers/release/Release-Manuscript-Master.doc
trunk/docs/papers/release/Use Case 3 - JF.doc
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <al...@us...> - 2008-11-02 08:56:34
|
Revision: 1112
http://obi.svn.sourceforge.net/obi/?rev=1112&view=rev
Author: alanr
Date: 2008-11-02 08:56:30 +0000 (Sun, 02 Nov 2008)
Log Message:
-----------
M tools/build/obi.asd
handle dependency
M tools/build/add-assumed-individuals.lisp
read/write to branches directory
M tools/build/generate-obo.lisp
make it work more. Now loads into obo edit. Includes BFO/RO
M ontology/branches/obil.owl
Add external-byhand.owl
Modified Paths:
--------------
trunk/src/ontology/branches/obil.owl
trunk/src/tools/build/add-assumed-individuals.lisp
trunk/src/tools/build/generate-obo.lisp
trunk/src/tools/build/obi.asd
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_r...@us...> - 2008-10-31 18:33:34
|
Revision: 1111
http://obi.svn.sourceforge.net/obi/?rev=1111&view=rev
Author: p_rocca_serra
Date: 2008-10-31 18:33:29 +0000 (Fri, 31 Oct 2008)
Log Message:
-----------
Modified Paths:
--------------
trunk/src/ontology/branches/external.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_r...@us...> - 2008-10-31 18:21:53
|
Revision: 1110
http://obi.svn.sourceforge.net/obi/?rev=1110&view=rev
Author: p_rocca_serra
Date: 2008-10-31 18:21:44 +0000 (Fri, 31 Oct 2008)
Log Message:
-----------
http://purl.org/obo/owl/CHEBI#CHEBI_23367
Modified Paths:
--------------
trunk/src/ontology/branches/externalDerived.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_r...@us...> - 2008-10-31 18:21:33
|
Revision: 1109
http://obi.svn.sourceforge.net/obi/?rev=1109&view=rev
Author: p_rocca_serra
Date: 2008-10-31 18:21:29 +0000 (Fri, 31 Oct 2008)
Log Message:
-----------
fixing parent class of Tris (now under http://purl.org/obo/owl/CHEBI#CHEBI_23367)
Modified Paths:
--------------
trunk/src/ontology/branches/external.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_r...@us...> - 2008-10-31 18:20:44
|
Revision: 1108
http://obi.svn.sourceforge.net/obi/?rev=1108&view=rev
Author: p_rocca_serra
Date: 2008-10-31 18:20:40 +0000 (Fri, 31 Oct 2008)
Log Message:
-----------
Moving Tris and Triton X100 under Molecular entities:
Moving Tris required modification of External.owl and externalderived.owl
Addition of restriction to Agarose gel
Modified Paths:
--------------
trunk/src/ontology/branches/Biomaterial.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-30 13:26:35
|
Revision: 1107
http://obi.svn.sourceforge.net/obi/?rev=1107&view=rev
Author: mcourtot
Date: 2008-10-30 13:26:32 +0000 (Thu, 30 Oct 2008)
Log Message:
-----------
removed asserted enzyme under material entity, and deleted class 37 (DNA polymerase) as I had already mireoted the DNA polymerase complex from GO:0042575
Modified Paths:
--------------
trunk/src/ontology/branches/Biomaterial.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <dan...@us...> - 2008-10-30 12:01:07
|
Revision: 1106
http://obi.svn.sourceforge.net/obi/?rev=1106&view=rev
Author: daniel_schober
Date: 2008-10-30 11:37:06 +0000 (Thu, 30 Oct 2008)
Log Message:
-----------
Reverted to revision 1071 (so the MSI terms are in again). Namespace, ID and provenance annotation changes can still be done later.
Revision Links:
--------------
http://obi.svn.sourceforge.net/obi/?rev=1071&view=rev
Modified Paths:
--------------
trunk/src/ontology/branches/InstrumentAndPart.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <dan...@us...> - 2008-10-30 11:20:53
|
Revision: 1105
http://obi.svn.sourceforge.net/obi/?rev=1105&view=rev
Author: daniel_schober
Date: 2008-10-30 11:20:50 +0000 (Thu, 30 Oct 2008)
Log Message:
-----------
Revert to revision 1049 (the one before the MSI term submission), as long as namespace and term provenance discussion is not resolved.
Revision Links:
--------------
http://obi.svn.sourceforge.net/obi/?rev=1049&view=rev
Modified Paths:
--------------
trunk/src/ontology/branches/InstrumentAndPart.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 14:17:18
|
Revision: 1104
http://obi.svn.sourceforge.net/obi/?rev=1104&view=rev
Author: mcourtot
Date: 2008-10-28 14:17:04 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
removed extra subclass of owlThing for intraperitoneal administration
Modified Paths:
--------------
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <al...@us...> - 2008-10-28 13:32:26
|
Revision: 1103
http://obi.svn.sourceforge.net/obi/?rev=1103&view=rev
Author: alanr
Date: 2008-10-28 13:32:15 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
removed bearer_of
Modified Paths:
--------------
trunk/src/ontology/branches/external-byhand.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:31:35
|
Revision: 1102
http://obi.svn.sourceforge.net/obi/?rev=1102&view=rev
Author: mcourtot
Date: 2008-10-28 13:29:57 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
added import of external-byhand.owl
Modified Paths:
--------------
trunk/src/ontology/branches/obil.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:25:58
|
Revision: 1095
http://obi.svn.sourceforge.net/obi/?rev=1095&view=rev
Author: mcourtot
Date: 2008-10-28 11:49:46 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
corrected xml:base to external-byhand.owl
Modified Paths:
--------------
trunk/src/ontology/branches/external-byhand.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:25:49
|
Revision: 1096
http://obi.svn.sourceforge.net/obi/?rev=1096&view=rev
Author: mcourtot
Date: 2008-10-28 11:52:29 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
update to include external-byhand.owl
Modified Paths:
--------------
trunk/src/ontology/branches/obi.owl.template
trunk/src/ontology/branches/obi.repository.template
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <al...@us...> - 2008-10-28 13:25:39
|
Revision: 1090
http://obi.svn.sourceforge.net/obi/?rev=1090&view=rev
Author: alanr
Date: 2008-10-28 11:06:17 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
create external-by-hand, move there anything that external derived can't do
Modified Paths:
--------------
trunk/src/ontology/branches/external.owl
Added Paths:
-----------
trunk/src/ontology/branches/external-byhand.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:25:35
|
Revision: 1094
http://obi.svn.sourceforge.net/obi/?rev=1094&view=rev
Author: mcourtot
Date: 2008-10-28 11:33:13 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
clean up of external.owl by removing manually added information not required anymore by updating externalDerived.owl from new neurocommons
Modified Paths:
--------------
trunk/src/ontology/branches/external.owl
trunk/src/ontology/branches/externalDerived.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <al...@us...> - 2008-10-28 13:25:20
|
Revision: 1097
http://obi.svn.sourceforge.net/obi/?rev=1097&view=rev
Author: alanr
Date: 2008-10-28 12:37:07 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
add inheres_in
Modified Paths:
--------------
trunk/src/ontology/branches/external-byhand.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:25:00
|
Revision: 1092
http://obi.svn.sourceforge.net/obi/?rev=1092&view=rev
Author: mcourtot
Date: 2008-10-28 11:15:50 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
added quality
relational quality of continuant PATO 1238 snap:Quality
relational spatial quality 1631
dorsal 1233
rigth side of 1793
left 1792
lateral 1193
ventral 1196
frontal alt term for anterior 1632
monadic quality of continuant 1237
mireoted from pato
Modified Paths:
--------------
trunk/src/ontology/branches/external.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:24:59
|
Revision: 1098
http://obi.svn.sourceforge.net/obi/?rev=1098&view=rev
Author: mcourtot
Date: 2008-10-28 12:38:30 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
added underscore for positional qualities (we need to think about latitude and longitude)
removed old terms that have been mireoted from pato: lateral, ventral, frontal, left, right
Modified Paths:
--------------
trunk/src/ontology/branches/Quality.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <al...@us...> - 2008-10-28 13:24:57
|
Revision: 1100
http://obi.svn.sourceforge.net/obi/?rev=1100&view=rev
Author: alanr
Date: 2008-10-28 12:45:49 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
repair
Modified Paths:
--------------
trunk/src/ontology/branches/external-byhand.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:24:44
|
Revision: 1101
http://obi.svn.sourceforge.net/obi/?rev=1101&view=rev
Author: mcourtot
Date: 2008-10-28 13:23:54 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
removed defined classes as asserted classes under process and instead put under defined classes bucket
administering, intraperitoneal and analyte measuring assay
Modified Paths:
--------------
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <mco...@us...> - 2008-10-28 13:24:42
|
Revision: 1099
http://obi.svn.sourceforge.net/obi/?rev=1099&view=rev
Author: mcourtot
Date: 2008-10-28 12:39:20 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
removed underscore in label of eluant_role, target role, analyte_role and administered material role
Modified Paths:
--------------
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <al...@us...> - 2008-10-28 11:22:57
|
Revision: 1093
http://obi.svn.sourceforge.net/obi/?rev=1093&view=rev
Author: alanr
Date: 2008-10-28 11:19:38 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
add :debug t as option to create-external-derived
Modified Paths:
--------------
trunk/src/tools/build/create-external-derived.lisp
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <al...@us...> - 2008-10-28 11:09:48
|
Revision: 1091
http://obi.svn.sourceforge.net/obi/?rev=1091&view=rev
Author: alanr
Date: 2008-10-28 11:07:07 +0000 (Tue, 28 Oct 2008)
Log Message:
-----------
fix ontology name
Modified Paths:
--------------
trunk/src/ontology/branches/external-byhand.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_r...@us...> - 2008-10-25 16:26:10
|
Revision: 1089
http://obi.svn.sourceforge.net/obi/?rev=1089&view=rev
Author: p_rocca_serra
Date: 2008-10-25 16:26:07 +0000 (Sat, 25 Oct 2008)
Log Message:
-----------
add restriction to synthesize
change label to synthesis
Modified Paths:
--------------
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
