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From: <al...@us...> - 2009-01-13 07:12:12
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Revision: 1338
http://obi.svn.sourceforge.net/obi/?rev=1338&view=rev
Author: alanr
Date: 2009-01-13 07:12:07 +0000 (Tue, 13 Jan 2009)
Log Message:
-----------
don't make other properties subs of obsolete obo_rel:relationship
Modified Paths:
--------------
trunk/src/ontology/external/ro.owl
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From: <al...@us...> - 2009-01-13 07:11:49
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Revision: 1337
http://obi.svn.sourceforge.net/obi/?rev=1337&view=rev
Author: alanr
Date: 2009-01-13 07:11:40 +0000 (Tue, 13 Jan 2009)
Log Message:
-----------
add an alias or two
Modified Paths:
--------------
trunk/src/tools/build/util.lisp
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From: <al...@us...> - 2009-01-13 07:10:35
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Revision: 1336
http://obi.svn.sourceforge.net/obi/?rev=1336&view=rev
Author: alanr
Date: 2009-01-13 07:10:31 +0000 (Tue, 13 Jan 2009)
Log Message:
-----------
don't write "SLOT-CONSTRAINTS" property
Modified Paths:
--------------
trunk/src/tools/build/generate-obo.lisp
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From: <al...@us...> - 2009-01-13 07:09:15
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Revision: 1335
http://obi.svn.sourceforge.net/obi/?rev=1335&view=rev
Author: alanr
Date: 2009-01-13 07:09:09 +0000 (Tue, 13 Jan 2009)
Log Message:
-----------
don't obsolete all the relationships.
See obo-relations google group posting http://groups.google.com/group/obo-relations/browse_thread/thread/d5b95bd99e21342f
Modified Paths:
--------------
trunk/src/ontology/branches/obi.obo
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From: <al...@us...> - 2009-01-13 06:40:27
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Revision: 1334
http://obi.svn.sourceforge.net/obi/?rev=1334&view=rev
Author: alanr
Date: 2009-01-13 06:40:21 +0000 (Tue, 13 Jan 2009)
Log Message:
-----------
update to recent version of http://purl.obofoundry.org/obo/owl/relationship
Modified Paths:
--------------
trunk/src/ontology/external/ro.owl
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From: <al...@us...> - 2009-01-12 19:16:37
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Revision: 1333
http://obi.svn.sourceforge.net/obi/?rev=1333&view=rev
Author: alanr
Date: 2009-01-12 19:16:32 +0000 (Mon, 12 Jan 2009)
Log Message:
-----------
no circular obo_rel relationship is_a
Modified Paths:
--------------
trunk/src/tools/build/generate-obo.lisp
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From: <jen...@us...> - 2009-01-12 16:46:45
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Revision: 1332
http://obi.svn.sourceforge.net/obi/?rev=1332&view=rev
Author: jenfostel
Date: 2009-01-12 16:46:34 +0000 (Mon, 12 Jan 2009)
Log Message:
-----------
added manufacturer role and added restriction on study personnel that the role inheres in an organization or a person
Modified Paths:
--------------
trunk/src/ontology/branches/Role.owl
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From: <al...@us...> - 2009-01-12 02:26:43
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Revision: 1331
http://obi.svn.sourceforge.net/obi/?rev=1331&view=rev
Author: alanr
Date: 2009-01-12 02:26:38 +0000 (Mon, 12 Jan 2009)
Log Message:
-----------
a bit more, plus comments
Modified Paths:
--------------
trunk/src/tools/build/generate-obo.lisp
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From: <al...@us...> - 2009-01-12 02:26:29
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Revision: 1330
http://obi.svn.sourceforge.net/obi/?rev=1330&view=rev
Author: alanr
Date: 2009-01-12 02:26:25 +0000 (Mon, 12 Jan 2009)
Log Message:
-----------
a bit better.
Modified Paths:
--------------
trunk/src/ontology/branches/obi.obo
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From: <al...@us...> - 2009-01-12 02:09:34
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Revision: 1329
http://obi.svn.sourceforge.net/obi/?rev=1329&view=rev
Author: alanr
Date: 2009-01-12 02:09:28 +0000 (Mon, 12 Jan 2009)
Log Message:
-----------
opportunistic anal metadata cleaning
Modified Paths:
--------------
trunk/src/ontology/branches/Obsolete.owl
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From: <al...@us...> - 2009-01-11 22:56:08
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Revision: 1328
http://obi.svn.sourceforge.net/obi/?rev=1328&view=rev
Author: alanr
Date: 2009-01-11 22:56:03 +0000 (Sun, 11 Jan 2009)
Log Message:
-----------
another go at it
Modified Paths:
--------------
trunk/src/ontology/branches/obi.obo
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From: <al...@us...> - 2009-01-11 22:55:28
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Revision: 1327
http://obi.svn.sourceforge.net/obi/?rev=1327&view=rev
Author: alanr
Date: 2009-01-11 22:55:23 +0000 (Sun, 11 Jan 2009)
Log Message:
-----------
more progress
Modified Paths:
--------------
trunk/src/tools/build/generate-obo.lisp
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From: <al...@us...> - 2009-01-11 22:20:50
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Revision: 1326
http://obi.svn.sourceforge.net/obi/?rev=1326&view=rev
Author: alanr
Date: 2009-01-11 22:20:46 +0000 (Sun, 11 Jan 2009)
Log Message:
-----------
Fix multiline definition source fields
Modified Paths:
--------------
trunk/src/ontology/branches/Obsolete.owl
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
trunk/src/ontology/branches/Role.owl
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From: <al...@us...> - 2009-01-11 22:00:30
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Revision: 1325
http://obi.svn.sourceforge.net/obi/?rev=1325&view=rev
Author: alanr
Date: 2009-01-11 22:00:22 +0000 (Sun, 11 Jan 2009)
Log Message:
-----------
(defun malformed-metadata (kb)
;; check for multiline values for definition source, definition editor, alternative term, preferred term
Modified Paths:
--------------
trunk/src/tools/build/qc-queries.lisp
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From: <p_r...@us...> - 2009-01-09 17:33:29
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Revision: 1324
http://obi.svn.sourceforge.net/obi/?rev=1324&view=rev
Author: p_rocca_serra
Date: 2009-01-09 17:33:24 +0000 (Fri, 09 Jan 2009)
Log Message:
-----------
adding classes + ancillary metadata
Modified Paths:
--------------
trunk/src/ontology/branches/PlanAndPlannedProcess.owl
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From: <al...@us...> - 2009-01-08 06:47:41
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Revision: 1323
http://obi.svn.sourceforge.net/obi/?rev=1323&view=rev
Author: alanr
Date: 2009-01-08 06:47:37 +0000 (Thu, 08 Jan 2009)
Log Message:
-----------
for debugging
Added Paths:
-----------
releases/2008-12-26/branches/obili.owl
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From: <al...@us...> - 2009-01-08 06:46:50
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Revision: 1322
http://obi.svn.sourceforge.net/obi/?rev=1322&view=rev
Author: alanr
Date: 2009-01-08 06:46:45 +0000 (Thu, 08 Jan 2009)
Log Message:
-----------
disjoints
Added Paths:
-----------
releases/2008-12-26/branches/disjoints.owl
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From: <al...@us...> - 2009-01-08 06:46:14
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Revision: 1321
http://obi.svn.sourceforge.net/obi/?rev=1321&view=rev
Author: alanr
Date: 2009-01-08 06:46:07 +0000 (Thu, 08 Jan 2009)
Log Message:
-----------
for testing
Added Paths:
-----------
releases/2008-12-26/branches/inferred-superclasses.owl
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From: <jam...@us...> - 2009-01-07 16:49:30
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Revision: 1320
http://obi.svn.sourceforge.net/obi/?rev=1320&view=rev
Author: jamesmalone
Date: 2009-01-07 16:49:25 +0000 (Wed, 07 Jan 2009)
Log Message:
-----------
placed normalization data transformation back in dt owl file (was in DENRIE), probably my fault
Modified Paths:
--------------
trunk/src/ontology/branches/DataTransformation.owl
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From: <jam...@us...> - 2009-01-07 16:48:49
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Revision: 1319
http://obi.svn.sourceforge.net/obi/?rev=1319&view=rev
Author: jamesmalone
Date: 2009-01-07 16:48:40 +0000 (Wed, 07 Jan 2009)
Log Message:
-----------
removed normalization data transformation (should be in DT owl file)
Modified Paths:
--------------
trunk/src/ontology/branches/DigitalEntityPlus.owl
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From: <mco...@us...> - 2008-12-29 19:59:49
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Revision: 1318
http://obi.svn.sourceforge.net/obi/?rev=1318&view=rev
Author: mcourtot
Date: 2008-12-29 19:59:46 +0000 (Mon, 29 Dec 2008)
Log Message:
-----------
created report file on qc-queries
note that the report mentions a missing label for OBI_0000022, specified input role, which has now been added
Added Paths:
-----------
releases/2008-12-26/merged/qc-queries-report.txt
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From: <mco...@us...> - 2008-12-29 19:57:22
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Revision: 1317
http://obi.svn.sourceforge.net/obi/?rev=1317&view=rev
Author: mcourtot
Date: 2008-12-29 19:57:18 +0000 (Mon, 29 Dec 2008)
Log Message:
-----------
added missing label for specified input role
Modified Paths:
--------------
releases/2008-12-26/branches/Role.owl
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From: <mco...@us...> - 2008-12-29 19:55:25
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Revision: 1316
http://obi.svn.sourceforge.net/obi/?rev=1316&view=rev
Author: mcourtot
Date: 2008-12-29 19:55:21 +0000 (Mon, 29 Dec 2008)
Log Message:
-----------
added missing label for specified input role
Modified Paths:
--------------
trunk/src/ontology/branches/Role.owl
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From: <mco...@us...> - 2008-12-29 19:42:36
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Revision: 1315
http://obi.svn.sourceforge.net/obi/?rev=1315&view=rev
Author: mcourtot
Date: 2008-12-29 19:42:33 +0000 (Mon, 29 Dec 2008)
Log Message:
-----------
removed extra restriction of recombinant plasmid
Modified Paths:
--------------
releases/2008-12-26/branches/InstrumentAndPart.owl
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From: <mco...@us...> - 2008-12-29 19:40:26
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Revision: 1314
http://obi.svn.sourceforge.net/obi/?rev=1314&view=rev
Author: mcourtot
Date: 2008-12-29 19:40:21 +0000 (Mon, 29 Dec 2008)
Log Message:
-----------
removed extra restriction on recombinant plasmid
Modified Paths:
--------------
trunk/src/ontology/branches/InstrumentAndPart.owl
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