CViT - Chromosome Viewing Tool. A collection of Perl scripts that enable quick visualizations of features on linkage groups, psuedochromosomes or cytogenetic maps. Intended for whole-genome views of data but can be used to create images of single chromosomes/linkage groups, contigs, or BACs, or even proteins -- any feature that has a location on a backbone. Handles most standard genetic/genomic coordinate systems. Reads GFF3 data and produces a PNG or SVG image.

Project Samples

Gene models for maize genome assembly B73 RefGen_v2 BACs, hit densities, CGH, cytogenetic markers

Project Activity

See All Activity >

Categories

Bio-Informatics, Data Visualization

Follow CViT

CViT Web Site

Other Useful Business Software
Enterprise-grade ITSM, for every business Icon
Enterprise-grade ITSM, for every business

Give your IT, operations, and business teams the ability to deliver exceptional services—without the complexity.

Freshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.
Try it Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of CViT!

Additional Project Details

Intended Audience

Developers, Science/Research

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software, Perl Data Visualization Software

Registered

2010-10-20
Report inappropriate content