Thread: [Bio2rdf-svncommits] SF.net SVN: bio2rdf:[280] trunk/src/war (Page 3)

[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[280] trunk/src/war

From: <p_a...@us...> - 2009-04-13 02:11:50

Revision: 280
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=280&view=rev
Author:   p_ansell
Date:     2009-04-13 02:11:45 +0000 (Mon, 13 Apr 2009)

Log Message:
-----------
add some more robots.txt entries and use graphs for some more *.bio2rdf.org/sparql endpoints

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[286] trunk/src/war

From: <p_a...@us...> - 2009-04-14 00:44:52

Revision: 286
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=286&view=rev
Author:   p_ansell
Date:     2009-04-14 00:44:51 +0000 (Tue, 14 Apr 2009)

Log Message:
-----------
first attempt at overall statistics taking, although it doesn't seem to be working currently

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/log4j.properties
    trunk/src/war/WEB-INF/src/org/bio2rdf/BlacklistController.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/errorstats.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[287] trunk/src/war

From: <p_a...@us...> - 2009-04-14 05:26:12

Revision: 287
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=287&view=rev
Author:   p_ansell
Date:     2009-04-14 05:26:05 +0000 (Tue, 14 Apr 2009)

Log Message:
-----------
add more timing diagnostic messages

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/log4j.properties
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
    trunk/src/war/atlas2rdf.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[289] trunk/src/war

From: <p_a...@us...> - 2009-04-14 07:52:48

Revision: 289
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=289&view=rev
Author:   p_ansell
Date:     2009-04-14 07:52:38 +0000 (Tue, 14 Apr 2009)

Log Message:
-----------
fix logging levels for certain places

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/log4j.properties
    trunk/src/war/WEB-INF/src/org/bio2rdf/BlacklistController.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/atlas2rdf.jsp
    trunk/src/war/bio2rdfpipes.jsp
    trunk/src/war/errorstats.jsp
    trunk/src/war/namespaceproviders.jsp
    trunk/src/war/test-regexmethods.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[293] trunk/src/war

From: <p_a...@us...> - 2009-04-17 02:22:40

Revision: 293
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=293&view=rev
Author:   p_ansell
Date:     2009-04-17 01:35:35 +0000 (Fri, 17 Apr 2009)

Log Message:
-----------
add some unsafe operations to make foaf resolvable, and make pubmed queries more useful using the reverse geneid-pubmed rdf statements provided by neurocommons

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/atlas2rdf.jsp
    trunk/src/war/demo.rdf


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[296] trunk/src/war

From: <p_a...@us...> - 2009-04-17 02:27:02

Revision: 296
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=296&view=rev
Author:   p_ansell
Date:     2009-04-17 02:26:58 +0000 (Fri, 17 Apr 2009)

Log Message:
-----------
add complete date and reset period information to both errorstats and blacklisterror

Modified Paths:
--------------
    trunk/src/war/blacklisterror.jsp
    trunk/src/war/errorstats.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[297] trunk/src/war

From: <p_a...@us...> - 2009-04-17 04:06:08

Revision: 297
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=297&view=rev
Author:   p_ansell
Date:     2009-04-17 04:05:58 +0000 (Fri, 17 Apr 2009)

Log Message:
-----------
add journal provider

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/errorstats.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[298] trunk/src/war

From: <p_a...@us...> - 2009-04-17 05:31:38

Revision: 298
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=298&view=rev
Author:   p_ansell
Date:     2009-04-17 05:31:33 +0000 (Fri, 17 Apr 2009)

Log Message:
-----------
fix change from this morning that broke nocommunication static additions

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/atlas2rdf.jsp
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[302] trunk/src/war

From: <p_a...@us...> - 2009-04-17 06:28:19

Revision: 302
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=302&view=rev
Author:   p_ansell
Date:     2009-04-17 06:28:12 +0000 (Fri, 17 Apr 2009)

Log Message:
-----------
update robots.txt and fix broken rdf/xml static insert

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[309] trunk/src/war

From: <p_a...@us...> - 2009-04-18 06:48:54

Revision: 309
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=309&view=rev
Author:   p_ansell
Date:     2009-04-18 06:48:53 +0000 (Sat, 18 Apr 2009)

Log Message:
-----------
refactor everything to deal with the new namespace matching method

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/atlas2rdf.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[311] trunk/src/war

From: <p_a...@us...> - 2009-04-18 09:56:51

Revision: 311
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=311&view=rev
Author:   p_ansell
Date:     2009-04-18 09:56:37 +0000 (Sat, 18 Apr 2009)

Log Message:
-----------
add reverse providers for isbn,symbol,hugo and gene and add to robots.txt

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[332] trunk/src/war

From: <p_a...@us...> - 2009-04-20 04:33:24

Revision: 332
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=332&view=rev
Author:   p_ansell
Date:     2009-04-20 04:33:23 +0000 (Mon, 20 Apr 2009)

Log Message:
-----------
make /ns:KEY resolve to debug-configuration.jsp and turn all of the string namespace references into URI's

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/NamespaceEntry.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/WEB-INF/urlrewrite.xml
    trunk/src/war/debug-configuration.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[345] trunk/src/war

From: <p_a...@us...> - 2009-04-23 05:07:23

Revision: 345
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=345&view=rev
Author:   p_ansell
Date:     2009-04-23 05:07:08 +0000 (Thu, 23 Apr 2009)

Log Message:
-----------
add /urirank/ as full query type redirecting to the bio2rdf_uri_rank pipe and add some more providers for geneid given that geneid.bio2rdf.org isn't fully loaded currently

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/WEB-INF/urlrewrite.xml
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[350] trunk/src/war

From: <p_a...@us...> - 2009-04-24 08:13:05

Revision: 350
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=350&view=rev
Author:   p_ansell
Date:     2009-04-24 08:13:04 +0000 (Fri, 24 Apr 2009)

Log Message:
-----------
add permanent blocking feature to block people who request more than 200 URI resolutions in any given 12 minute blacklisting period, this is more than is allowed by robots.txt

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/BlacklistController.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/atlas2rdf.jsp
    trunk/src/war/blacklisterror.jsp
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[353] trunk/src/war

From: <p_a...@us...> - 2009-04-24 23:18:17

Revision: 353
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=353&view=rev
Author:   p_ansell
Date:     2009-04-24 23:18:13 +0000 (Fri, 24 Apr 2009)

Log Message:
-----------
minor robots fixes

Modified Paths:
--------------
    trunk/src/war/blacklisterror.jsp
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[358] trunk/src/war

From: <p_a...@us...> - 2009-04-26 08:52:38

Revision: 358
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=358&view=rev
Author:   p_ansell
Date:     2009-04-26 08:52:36 +0000 (Sun, 26 Apr 2009)

Log Message:
-----------
add paged offset facility using /pageoffset(\d+)/${queryString} structure

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/WEB-INF/urlrewrite.xml
    trunk/src/war/atlas2rdf.jsp
    trunk/src/war/jsp-bio2rdf/namespacecounts.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[361] trunk/src/war

From: <p_a...@us...> - 2009-04-27 00:29:56

Revision: 361
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=361&view=rev
Author:   p_ansell
Date:     2009-04-27 00:29:53 +0000 (Mon, 27 Apr 2009)

Log Message:
-----------
add /multiplelabel/ similar but faster than /multiple/ 

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/WEB-INF/urlrewrite.xml
    trunk/src/war/multifetch.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[365] trunk/src/war

From: <p_a...@us...> - 2009-04-28 04:10:06

Revision: 365
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=365&view=rev
Author:   p_ansell
Date:     2009-04-28 04:10:00 +0000 (Tue, 28 Apr 2009)

Log Message:
-----------
add some content type decision bits, and convert graphUriEnd to graphEnd etc.

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/NamespaceEntry.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/atlas2rdf.jsp
    trunk/src/war/debug-configuration.jsp
    trunk/src/war/robots.txt


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[366] trunk/src/war

From: <p_a...@us...> - 2009-04-28 05:53:06

Revision: 366
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=366&view=rev
Author:   p_ansell
Date:     2009-04-28 05:52:52 +0000 (Tue, 28 Apr 2009)

Log Message:
-----------
fix atlas2rdf.jsp so it has the xml PI on the first line and is therefore valid XML

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/atlas2rdf.jsp
    trunk/src/war/debug-configuration.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[371] trunk/src/war

From: <p_a...@us...> - 2009-04-30 18:39:15

Revision: 371
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=371&view=rev
Author:   p_ansell
Date:     2009-04-30 18:39:09 +0000 (Thu, 30 Apr 2009)

Log Message:
-----------
fix rule order configuration bug so that taxonomy now resolves again

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/debug-configuration.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[372] trunk/src/war

From: <p_a...@us...> - 2009-04-30 23:01:57

Revision: 372
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=372&view=rev
Author:   p_ansell
Date:     2009-04-30 23:01:55 +0000 (Thu, 30 Apr 2009)

Log Message:
-----------
fix searchns/ns/searchterm as it didn't seem appropriate to have a single case where ns:something wasn't ns:id

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/WEB-INF/urlrewrite.xml
    trunk/src/war/demo.rdf


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[373] trunk/src/war

From: <p_a...@us...> - 2009-04-30 23:20:53

Revision: 373
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=373&view=rev
Author:   p_ansell
Date:     2009-04-30 23:20:47 +0000 (Thu, 30 Apr 2009)

Log Message:
-----------
add initial urlrewrite support for /queryplan/

Modified Paths:
--------------
    trunk/src/war/WEB-INF/urlrewrite.xml
    trunk/src/war/atlas2rdf.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[374] trunk/src/war

From: <p_a...@us...> - 2009-05-01 00:58:04

Revision: 374
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=374&view=rev
Author:   p_ansell
Date:     2009-05-01 00:57:55 +0000 (Fri, 01 May 2009)

Log Message:
-----------
get queryplan working, just have to figure out the URI to show for each member of the query plan

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/log4j.properties
    trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/QueryBundle.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfNormalisationRule.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
    trunk/src/war/WEB-INF/urlrewrite.xml
    trunk/src/war/atlas2rdf.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[375] trunk/src/war

From: <p_a...@us...> - 2009-05-01 01:21:14

Revision: 375
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=375&view=rev
Author:   p_ansell
Date:     2009-05-01 01:21:04 +0000 (Fri, 01 May 2009)

Log Message:
-----------
make sane keys up for the query bundles

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/QueryBundle.java
    trunk/src/war/atlas2rdf.jsp


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[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[376] trunk/src/war

From: <p_a...@us...> - 2009-05-01 05:14:40

Revision: 376
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=376&view=rev
Author:   p_ansell
Date:     2009-05-01 05:14:26 +0000 (Fri, 01 May 2009)

Log Message:
-----------
finalise the /queryplan/ implementation

Modified Paths:
--------------
    trunk/src/war/WEB-INF/src/org/bio2rdf/QueryBundle.java
    trunk/src/war/WEB-INF/src/org/bio2rdf/RdfNormalisationRule.java
    trunk/src/war/atlas2rdf.jsp


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Thread: [Bio2rdf-svncommits] SF.net SVN: bio2rdf:[280] trunk/src/war (Page 3)

bio2rdf-svncommits