bio2rdf-svncommits Mailing List for bio2rdf (Page 8)
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From: <p_a...@us...> - 2009-12-10 23:39:35
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Revision: 817
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=817&view=rev
Author: p_ansell
Date: 2009-12-10 23:39:28 +0000 (Thu, 10 Dec 2009)
Log Message:
-----------
add more, including a list of the OBO ontologies referenced against the OBO foundry principles page
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-licenses-config.n3
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From: <p_a...@us...> - 2009-12-10 23:28:55
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Revision: 816
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=816&view=rev
Author: p_ansell
Date: 2009-12-10 23:28:45 +0000 (Thu, 10 Dec 2009)
Log Message:
-----------
add more licenses
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-licenses-config.n3
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From: <p_a...@us...> - 2009-12-10 10:31:45
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Revision: 815
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=815&view=rev
Author: p_ansell
Date: 2009-12-10 10:31:33 +0000 (Thu, 10 Dec 2009)
Log Message:
-----------
add go xml provider and add more license namespaces to GO and Sider
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-licenses-config.n3
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From: <p_a...@us...> - 2009-12-10 00:23:25
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Revision: 814
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=814&view=rev
Author: p_ansell
Date: 2009-12-10 00:23:17 +0000 (Thu, 10 Dec 2009)
Log Message:
-----------
make some changes to the pubmed rdfiser
Modified Paths:
--------------
trunk/src/war/jsp-bio2rdf/ncbi-pubmed2rdf.jsp
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From: <p_a...@us...> - 2009-12-09 22:28:42
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Revision: 813
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=813&view=rev
Author: p_ansell
Date: 2009-12-09 22:28:35 +0000 (Wed, 09 Dec 2009)
Log Message:
-----------
_ontology to _resource
Modified Paths:
--------------
trunk/build.xml
trunk/src/war/WEB-INF/autogenerated-bio2rdf-query-insert-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
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From: <p_a...@us...> - 2009-12-04 02:18:15
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Revision: 812
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=812&view=rev
Author: p_ansell
Date: 2009-12-04 02:18:09 +0000 (Fri, 04 Dec 2009)
Log Message:
-----------
add a secondary reverse construct provider for dbpedia on the main graph
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
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From: <p_a...@us...> - 2009-12-04 00:21:44
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Revision: 811
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=811&view=rev
Author: p_ansell
Date: 2009-12-04 00:17:06 +0000 (Fri, 04 Dec 2009)
Log Message:
-----------
avoid memory overflows by restricting definitions for internal configuration items to the part that people are looking for
Modified Paths:
--------------
trunk/src/war/debug-configuration.jsp
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From: <p_a...@us...> - 2009-11-30 05:07:05
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Revision: 810
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=810&view=rev
Author: p_ansell
Date: 2009-11-30 05:06:54 +0000 (Mon, 30 Nov 2009)
Log Message:
-----------
update the autogenerated list
Modified Paths:
--------------
trunk/src/war/WEB-INF/autogenerated-bio2rdf-query-insert-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
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From: <p_a...@us...> - 2009-11-30 05:03:48
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Revision: 809
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=809&view=rev
Author: p_ansell
Date: 2009-11-30 05:03:42 +0000 (Mon, 30 Nov 2009)
Log Message:
-----------
add more html providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/autogenerated-bio2rdf-query-insert-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
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From: <p_a...@us...> - 2009-11-30 04:36:59
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Revision: 808
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=808&view=rev
Author: p_ansell
Date: 2009-11-30 04:36:52 +0000 (Mon, 30 Nov 2009)
Log Message:
-----------
add more namespaces and html providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/autogenerated-bio2rdf-query-insert-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
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From: <p_a...@us...> - 2009-11-30 04:12:14
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Revision: 807
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=807&view=rev
Author: p_ansell
Date: 2009-11-30 04:12:08 +0000 (Mon, 30 Nov 2009)
Log Message:
-----------
add some more html providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
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From: <p_a...@us...> - 2009-11-30 02:58:36
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Revision: 806
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=806&view=rev
Author: p_ansell
Date: 2009-11-30 02:58:30 +0000 (Mon, 30 Nov 2009)
Log Message:
-----------
add more providers and namespaces and rdfrules
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
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From: <p_a...@us...> - 2009-11-27 02:24:43
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Revision: 805
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=805&view=rev
Author: p_ansell
Date: 2009-11-27 02:24:36 +0000 (Fri, 27 Nov 2009)
Log Message:
-----------
fix kegg search
Modified Paths:
--------------
trunk/src/war/jsp-bio2rdf/kegg-search-http2rdf.jsp
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From: <p_a...@us...> - 2009-11-27 01:09:18
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Revision: 804
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=804&view=rev
Author: p_ansell
Date: 2009-11-27 01:09:12 +0000 (Fri, 27 Nov 2009)
Log Message:
-----------
update autogenerated insert providers to include new html provider namespaces
Modified Paths:
--------------
trunk/src/war/WEB-INF/autogenerated-bio2rdf-query-insert-providers-config.n3
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From: <p_a...@us...> - 2009-11-27 01:04:09
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Revision: 803
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=803&view=rev
Author: p_ansell
Date: 2009-11-27 01:04:01 +0000 (Fri, 27 Nov 2009)
Log Message:
-----------
add more html providers that are referenced from Entrez Geneid and not rdfised already
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
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From: <p_a...@us...> - 2009-11-27 00:29:29
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Revision: 802
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=802&view=rev
Author: p_ansell
Date: 2009-11-27 00:29:20 +0000 (Fri, 27 Nov 2009)
Log Message:
-----------
cleanup html providers file and add aceview html provider
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
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From: <p_a...@us...> - 2009-11-26 03:58:09
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Revision: 801
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=801&view=rev
Author: p_ansell
Date: 2009-11-26 03:57:59 +0000 (Thu, 26 Nov 2009)
Log Message:
-----------
add more html providers and update the autogenerated configuration to match
Modified Paths:
--------------
trunk/src/war/WEB-INF/autogenerated-bio2rdf-query-insert-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/urlrewrite.xml
trunk/src/war/internalschema.jsp
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From: <p_a...@us...> - 2009-11-26 01:23:48
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Revision: 800
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=800&view=rev
Author: p_ansell
Date: 2009-11-26 01:23:41 +0000 (Thu, 26 Nov 2009)
Log Message:
-----------
changeover ontology URI's from /ns/Namespace: to /Namespace_ontology:
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
trunk/src/war/WEB-INF/src/log4j.properties
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From: <p_a...@us...> - 2009-11-25 01:47:49
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Revision: 799
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=799&view=rev
Author: p_ansell
Date: 2009-11-25 01:47:38 +0000 (Wed, 25 Nov 2009)
Log Message:
-----------
more updates so that the mashup returns useful information, and block more user agents
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Utilities.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/robots.txt
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From: <p_a...@us...> - 2009-11-24 22:50:50
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Revision: 798
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=798&view=rev
Author: p_ansell
Date: 2009-11-24 22:50:43 +0000 (Tue, 24 Nov 2009)
Log Message:
-----------
fix bugs
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/src/org/bio2rdf/Utilities.java
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From: <p_a...@us...> - 2009-11-24 22:35:29
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Revision: 797
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=797&view=rev
Author: p_ansell
Date: 2009-11-24 22:35:19 +0000 (Tue, 24 Nov 2009)
Log Message:
-----------
fix parallel regression
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/Utilities.java
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From: <p_a...@us...> - 2009-11-24 22:33:40
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Revision: 796
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=796&view=rev
Author: p_ansell
Date: 2009-11-24 22:33:31 +0000 (Tue, 24 Nov 2009)
Log Message:
-----------
update some work from yesterday related to a special mashup
Modified Paths:
--------------
trunk/build.xml
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-licenses-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcherQueryRunnable.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Utilities.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/urlrewrite.xml
trunk/src/war/atlas2rdf.jsp
trunk/src/war/blacklisterror.jsp
trunk/src/war/multifetch.jsp
trunk/src/war/robots.txt
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From: <p_a...@us...> - 2009-11-20 01:06:22
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Revision: 795
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=795&view=rev
Author: p_ansell
Date: 2009-11-20 01:06:11 +0000 (Fri, 20 Nov 2009)
Log Message:
-----------
minor change to pfam license provider
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-licenses-config.n3
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From: <p_a...@us...> - 2009-11-20 00:40:43
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Revision: 794
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=794&view=rev
Author: p_ansell
Date: 2009-11-20 00:40:34 +0000 (Fri, 20 Nov 2009)
Log Message:
-----------
add ensembl license provider, and include new configuration files into the build.xml file
Modified Paths:
--------------
trunk/build.xml
trunk/src/war/WEB-INF/base-bio2rdf-providers-licenses-config.n3
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From: <p_a...@us...> - 2009-11-20 00:19:23
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Revision: 793
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=793&view=rev
Author: p_ansell
Date: 2009-11-20 00:15:37 +0000 (Fri, 20 Nov 2009)
Log Message:
-----------
add autogenerated provider insertion file, and split out the html and license providers from the others so they are easier to maintain
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
Added Paths:
-----------
trunk/src/war/WEB-INF/autogenerated-bio2rdf-query-insert-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-html-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-licenses-config.n3
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