bio2rdf-svncommits Mailing List for bio2rdf (Page 37)
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From: <p_a...@us...> - 2008-08-20 04:21:34
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Revision: 92
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=92&view=rev
Author: p_ansell
Date: 2008-08-20 04:21:41 +0000 (Wed, 20 Aug 2008)
Log Message:
-----------
make up configuration value for prefix, ie, http://bio2rdf.org/ and separator, ie, :
Modified Paths:
--------------
branches/stripped-down-version/src/util/perl/cleanupdata.pl
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/Settings.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/atlas2rdf.jsp
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From: <p_a...@us...> - 2008-08-15 07:01:54
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Revision: 91
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=91&view=rev
Author: p_ansell
Date: 2008-08-15 07:02:03 +0000 (Fri, 15 Aug 2008)
Log Message:
-----------
minor changes
Modified Paths:
--------------
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/atlas2rdf.jsp
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From: <p_a...@us...> - 2008-08-12 10:56:12
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Revision: 90
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=90&view=rev
Author: p_ansell
Date: 2008-08-12 10:56:21 +0000 (Tue, 12 Aug 2008)
Log Message:
-----------
bump version to prepare for next beta
Modified Paths:
--------------
branches/stripped-down-version/build.xml
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From: <p_a...@us...> - 2008-08-12 10:54:24
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Revision: 89
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=89&view=rev
Author: p_ansell
Date: 2008-08-12 10:54:30 +0000 (Tue, 12 Aug 2008)
Log Message:
-----------
tag 0.2_beta3 release
Added Paths:
-----------
tags/0.2_beta3/
tags/0.2_beta3/build.xml
tags/0.2_beta3/dist/
tags/0.2_beta3/src/
tags/0.2_beta3/src/util/perl/cleanupdata.pl
tags/0.2_beta3/src/util/perl/freebase2n3.pl
tags/0.2_beta3/src/util/perl/generateloadcommands.pl
tags/0.2_beta3/src/war/WEB-INF/src/
tags/0.2_beta3/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
tags/0.2_beta3/src/war/WEB-INF/src/org/bio2rdf/Settings.java
tags/0.2_beta3/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
tags/0.2_beta3/src/war/WEB-INF/system.conf
tags/0.2_beta3/src/war/WEB-INF/urlrewrite.xml
tags/0.2_beta3/src/war/WEB-INF/web-production-template.xml
tags/0.2_beta3/src/war/atlas2rdf.jsp
tags/0.2_beta3/src/war/bio2rdf.owl
tags/0.2_beta3/src/war/favicon.ico
tags/0.2_beta3/src/war/index.html
tags/0.2_beta3/src/war/jsp-bio2rdf/kegg-search-http2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/lsid-bio2rdf2lsid.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/ncbi-entrez2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/ncbi-map-http2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/swoogle-search2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/uniprot-search-http2rdf.jsp
Removed Paths:
-------------
tags/0.2_beta3/build.xml
tags/0.2_beta3/dist/
tags/0.2_beta3/src/
tags/0.2_beta3/src/war/WEB-INF/classes/log4j.properties
tags/0.2_beta3/src/war/WEB-INF/lib/elmo.jar
tags/0.2_beta3/src/war/WEB-INF/lib/mysql-connector-java-3.1.12-bin.jar
tags/0.2_beta3/src/war/WEB-INF/lib/openrdf-model.jar
tags/0.2_beta3/src/war/WEB-INF/lib/openrdf-util.jar
tags/0.2_beta3/src/war/WEB-INF/lib/rio.jar
tags/0.2_beta3/src/war/WEB-INF/lib/sesame.jar
tags/0.2_beta3/src/war/WEB-INF/lib/soap.jar
tags/0.2_beta3/src/war/WEB-INF/lib/spring-beans.jar
tags/0.2_beta3/src/war/WEB-INF/lib/spring-core.jar
tags/0.2_beta3/src/war/WEB-INF/src/org/bio2rdf/Settings.java
tags/0.2_beta3/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
tags/0.2_beta3/src/war/WEB-INF/system.conf
tags/0.2_beta3/src/war/WEB-INF/urlrewrite.xml
tags/0.2_beta3/src/war/WEB-INF/web-production-template.xml
tags/0.2_beta3/src/war/atlas-redirect2rdf.jsp
tags/0.2_beta3/src/war/atlas2rdf.jsp
tags/0.2_beta3/src/war/bio2rdf.owl
tags/0.2_beta3/src/war/favicon.ico
tags/0.2_beta3/src/war/index.html
tags/0.2_beta3/src/war/jsp-bio2rdf/kegg-search-http2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/lsid-bio2rdf2lsid.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/ncbi-entrez2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/ncbi-map-http2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/swoogle-search2rdf.jsp
tags/0.2_beta3/src/war/jsp-bio2rdf/uniprot-search-http2rdf.jsp
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From: <p_a...@us...> - 2008-08-12 07:35:31
|
Revision: 88
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=88&view=rev
Author: p_ansell
Date: 2008-08-12 07:35:39 +0000 (Tue, 12 Aug 2008)
Log Message:
-----------
massive changes, make search and links work better, and readd dynamic search capabilities
Modified Paths:
--------------
branches/stripped-down-version/build.xml
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/Settings.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/WEB-INF/urlrewrite.xml
branches/stripped-down-version/src/war/WEB-INF/web-production-template.xml
branches/stripped-down-version/src/war/atlas2rdf.jsp
branches/stripped-down-version/src/war/favicon.ico
branches/stripped-down-version/src/war/jsp-bio2rdf/kegg-search-http2rdf.jsp
branches/stripped-down-version/src/war/jsp-bio2rdf/lsid-bio2rdf2lsid.jsp
branches/stripped-down-version/src/war/jsp-bio2rdf/ncbi-entrez2rdf.jsp
branches/stripped-down-version/src/war/jsp-bio2rdf/ncbi-map-http2rdf.jsp
branches/stripped-down-version/src/war/jsp-bio2rdf/swoogle-search2rdf.jsp
branches/stripped-down-version/src/war/jsp-bio2rdf/uniprot-search-http2rdf.jsp
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From: <p_a...@us...> - 2008-08-06 12:13:42
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Revision: 87
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=87&view=rev
Author: p_ansell
Date: 2008-08-06 12:13:51 +0000 (Wed, 06 Aug 2008)
Log Message:
-----------
add cleanupdata.pl and change some more things in the configuration part
Modified Paths:
--------------
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/Settings.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/atlas2rdf.jsp
Added Paths:
-----------
branches/stripped-down-version/src/util/perl/cleanupdata.pl
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From: <p_a...@us...> - 2008-08-05 07:04:32
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Revision: 86
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=86&view=rev
Author: p_ansell
Date: 2008-08-05 07:04:41 +0000 (Tue, 05 Aug 2008)
Log Message:
-----------
make distributed link queries work as far as I can tell
Modified Paths:
--------------
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/atlas2rdf.jsp
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From: <p_a...@us...> - 2008-08-05 06:19:19
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Revision: 85
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=85&view=rev
Author: p_ansell
Date: 2008-08-05 06:19:27 +0000 (Tue, 05 Aug 2008)
Log Message:
-----------
quick script for creating a bash command to fit the larger splitfile.pl results, notably, gene2accession
Added Paths:
-----------
branches/stripped-down-version/src/util/perl/generateloadcommands.pl
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From: <p_a...@us...> - 2008-08-05 06:07:13
|
Revision: 84
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=84&view=rev
Author: p_ansell
Date: 2008-08-05 06:07:22 +0000 (Tue, 05 Aug 2008)
Log Message:
-----------
more updates to customise the link queries to make them suitable for distributed databases
Modified Paths:
--------------
branches/stripped-down-version/build.xml
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/Settings.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/atlas2rdf.jsp
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From: <p_a...@us...> - 2008-08-01 06:06:01
|
Revision: 83
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=83&view=rev
Author: p_ansell
Date: 2008-08-01 06:06:09 +0000 (Fri, 01 Aug 2008)
Log Message:
-----------
add provider configuration materials, bug fix with randomness
Modified Paths:
--------------
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/Settings.java
branches/stripped-down-version/src/war/atlas2rdf.jsp
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From: <p_a...@us...> - 2008-08-01 05:58:22
|
Revision: 82
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=82&view=rev
Author: p_ansell
Date: 2008-08-01 05:58:31 +0000 (Fri, 01 Aug 2008)
Log Message:
-----------
add provider configuration materials
Modified Paths:
--------------
branches/stripped-down-version/build.xml
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/Settings.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/atlas2rdf.jsp
Added Paths:
-----------
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
Removed Paths:
-------------
branches/stripped-down-version/src/war/atlas-redirect2rdf.jsp
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From: <p_a...@us...> - 2008-07-30 11:34:19
|
Revision: 81
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=81&view=rev
Author: p_ansell
Date: 2008-07-30 11:34:27 +0000 (Wed, 30 Jul 2008)
Log Message:
-----------
make up the configuration settings for database mirroring in atlas2rdf.jsp
Modified Paths:
--------------
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
branches/stripped-down-version/src/war/atlas2rdf.jsp
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From: <p_a...@us...> - 2008-07-30 10:55:23
|
Revision: 80
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=80&view=rev
Author: p_ansell
Date: 2008-07-30 10:55:32 +0000 (Wed, 30 Jul 2008)
Log Message:
-----------
make configuration based two level querying function
Modified Paths:
--------------
branches/stripped-down-version/src/war/atlas2rdf.jsp
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From: <p_a...@us...> - 2008-07-30 10:13:14
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Revision: 79
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=79&view=rev
Author: p_ansell
Date: 2008-07-30 10:13:23 +0000 (Wed, 30 Jul 2008)
Log Message:
-----------
cleanup, add properties file for basic properties so far, change build system to fit with the properties, and provide backwards compatibility with old namespaces used in databases and datadumps at the atlas2rdf.jsp level
Modified Paths:
--------------
branches/stripped-down-version/build.xml
branches/stripped-down-version/src/war/WEB-INF/system.conf
branches/stripped-down-version/src/war/WEB-INF/urlrewrite.xml
branches/stripped-down-version/src/war/atlas2rdf.jsp
Added Paths:
-----------
branches/stripped-down-version/src/util/perl/freebase2n3.pl
branches/stripped-down-version/src/war/WEB-INF/src/
branches/stripped-down-version/src/war/WEB-INF/src/log4j.properties
branches/stripped-down-version/src/war/WEB-INF/src/org/
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/Settings.java
branches/stripped-down-version/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
Removed Paths:
-------------
branches/stripped-down-version/src/war/WEB-INF/classes/log4j.properties
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