bio2rdf-svncommits Mailing List for bio2rdf (Page 29)
Brought to you by:
fbelleau,
vincentemonet
Menu
▾
▴
bio2rdf-svncommits — Emails when a subversion commit is made to the repository
You can subscribe to this list here.
| 2008 |
Jan
|
Feb
|
Mar
|
Apr
|
May
|
Jun
|
Jul
(3) |
Aug
(12) |
Sep
(13) |
Oct
(45) |
Nov
(28) |
Dec
(14) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2009 |
Jan
|
Feb
(1) |
Mar
(53) |
Apr
(126) |
May
(123) |
Jun
(104) |
Jul
(44) |
Aug
(54) |
Sep
(46) |
Oct
(28) |
Nov
(38) |
Dec
(10) |
| 2010 |
Jan
(4) |
Feb
(13) |
Mar
(4) |
Apr
(20) |
May
(20) |
Jun
(9) |
Jul
(1) |
Aug
|
Sep
(3) |
Oct
|
Nov
(10) |
Dec
(17) |
| 2011 |
Jan
(4) |
Feb
(52) |
Mar
(3) |
Apr
|
May
|
Jun
|
Jul
(3) |
Aug
|
Sep
|
Oct
|
Nov
|
Dec
(1) |
| 2012 |
Jan
|
Feb
|
Mar
|
Apr
|
May
|
Jun
(6) |
Jul
|
Aug
(1) |
Sep
|
Oct
|
Nov
(1) |
Dec
|
|
From: <p_a...@us...> - 2009-04-14 23:34:01
|
Revision: 292
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=292&view=rev
Author: p_ansell
Date: 2009-04-14 23:32:29 +0000 (Tue, 14 Apr 2009)
Log Message:
-----------
add privateuppercase to the genbank to reverse the lowercased database/URI effects
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-14 23:04:59
|
Revision: 291
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=291&view=rev
Author: p_ansell
Date: 2009-04-14 23:04:57 +0000 (Tue, 14 Apr 2009)
Log Message:
-----------
add genbank and gi extra providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-14 10:48:58
|
Revision: 290
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=290&view=rev
Author: p_ansell
Date: 2009-04-14 10:48:48 +0000 (Tue, 14 Apr 2009)
Log Message:
-----------
fix .* to .+ so that /query/namespace: no longer matches against the query as someone seems to think it should according to logs but it shouldn't
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/BlacklistController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-14 07:52:48
|
Revision: 289
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=289&view=rev
Author: p_ansell
Date: 2009-04-14 07:52:38 +0000 (Tue, 14 Apr 2009)
Log Message:
-----------
fix logging levels for certain places
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/BlacklistController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/atlas2rdf.jsp
trunk/src/war/bio2rdfpipes.jsp
trunk/src/war/errorstats.jsp
trunk/src/war/namespaceproviders.jsp
trunk/src/war/test-regexmethods.jsp
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-14 05:28:12
|
Revision: 288
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=288&view=rev
Author: p_ansell
Date: 2009-04-14 05:28:11 +0000 (Tue, 14 Apr 2009)
Log Message:
-----------
take out not very useful diagnostic as it is close to 0 milliseconds constantly and has a parent diagnostic still
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-14 05:26:12
|
Revision: 287
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=287&view=rev
Author: p_ansell
Date: 2009-04-14 05:26:05 +0000 (Tue, 14 Apr 2009)
Log Message:
-----------
add more timing diagnostic messages
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
trunk/src/war/atlas2rdf.jsp
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-14 00:44:52
|
Revision: 286
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=286&view=rev
Author: p_ansell
Date: 2009-04-14 00:44:51 +0000 (Tue, 14 Apr 2009)
Log Message:
-----------
first attempt at overall statistics taking, although it doesn't seem to be working currently
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/BlacklistController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/errorstats.jsp
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 10:55:39
|
Revision: 285
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=285&view=rev
Author: p_ansell
Date: 2009-04-13 10:55:35 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
add more fromlowercase query types
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 10:04:17
|
Revision: 284
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=284&view=rev
Author: p_ansell
Date: 2009-04-13 10:04:16 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
counttriplesfromlowercase and countlinksfromlowercase and avoid some issues with empty index lists in settings
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 07:12:15
|
Revision: 283
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=283&view=rev
Author: p_ansell
Date: 2009-04-13 07:12:14 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
add lower/upper case functionality, only one provider enabled for one query so far
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 03:32:15
|
Revision: 282
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=282&view=rev
Author: p_ansell
Date: 2009-04-13 03:32:06 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
add uniprot server back into the advanced queries bunch
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 02:53:18
|
Revision: 281
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=281&view=rev
Author: p_ansell
Date: 2009-04-13 02:53:06 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
add graph URI's for more providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 02:11:50
|
Revision: 280
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=280&view=rev
Author: p_ansell
Date: 2009-04-13 02:11:45 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
add some more robots.txt entries and use graphs for some more *.bio2rdf.org/sparql endpoints
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/robots.txt
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 01:56:37
|
Revision: 279
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=279&view=rev
Author: p_ansell
Date: 2009-04-13 01:56:31 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
add a similar version of the uri_rank using namespace and identifier parameters and move the uri version to _from_uri
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/bio2rdf_uri_rank.pipe
Added Paths:
-----------
trunk/src/war/WEB-INF/src/bio2rdf_uri_rank_from_uri.pipe
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-13 01:47:35
|
Revision: 278
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=278&view=rev
Author: p_ansell
Date: 2009-04-13 01:47:30 +0000 (Mon, 13 Apr 2009)
Log Message:
-----------
add bio2rdf_uri_rank.pipe that filters and combines the non-zero results from /countlinks/ and /counttriples/
Added Paths:
-----------
trunk/src/war/WEB-INF/src/bio2rdf_uri_rank.pipe
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-12 23:29:01
|
Revision: 277
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=277&view=rev
Author: p_ansell
Date: 2009-04-12 23:28:51 +0000 (Sun, 12 Apr 2009)
Log Message:
-----------
add ntriples encoding, and bump version to 0.4 given the number of changes to the API and the template options
Modified Paths:
--------------
trunk/build.xml
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/atlas2rdf.jsp
trunk/src/war/debug-configuration.jsp
trunk/src/war/jsp-bio2rdf/namespacecounts.jsp
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-12 04:39:06
|
Revision: 276
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=276&view=rev
Author: p_ansell
Date: 2009-04-12 04:39:04 +0000 (Sun, 12 Apr 2009)
Log Message:
-----------
add configuration file syntax and initial support for arbitrary namespace index match positions
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/atlas2rdf.jsp
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-10 05:44:43
|
Revision: 275
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=275&view=rev
Author: p_ansell
Date: 2009-04-10 05:44:37 +0000 (Fri, 10 Apr 2009)
Log Message:
-----------
minor change to user-agent
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-09 23:16:48
|
Revision: 274
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=274&view=rev
Author: p_ansell
Date: 2009-04-09 23:16:43 +0000 (Thu, 09 Apr 2009)
Log Message:
-----------
provider URL changes
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-09 23:16:19
|
Revision: 273
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=273&view=rev
Author: p_ansell
Date: 2009-04-09 23:16:18 +0000 (Thu, 09 Apr 2009)
Log Message:
-----------
put user agent on URL requests as well as SPARQL requests
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcher.java
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-09 03:16:13
|
Revision: 272
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=272&view=rev
Author: p_ansell
Date: 2009-04-09 03:16:11 +0000 (Thu, 09 Apr 2009)
Log Message:
-----------
add rebase
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-09 03:09:10
|
Revision: 271
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=271&view=rev
Author: p_ansell
Date: 2009-04-09 03:09:09 +0000 (Thu, 09 Apr 2009)
Log Message:
-----------
add more providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-09 02:37:55
|
Revision: 270
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=270&view=rev
Author: p_ansell
Date: 2009-04-09 02:37:54 +0000 (Thu, 09 Apr 2009)
Log Message:
-----------
add cas provider
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-09 02:24:49
|
Revision: 269
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=269&view=rev
Author: p_ansell
Date: 2009-04-09 02:24:44 +0000 (Thu, 09 Apr 2009)
Log Message:
-----------
add more providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-04-09 02:18:53
|
Revision: 268
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=268&view=rev
Author: p_ansell
Date: 2009-04-09 02:18:51 +0000 (Thu, 09 Apr 2009)
Log Message:
-----------
add new dictybase provider
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
