Search Results for "pipeline" - Page 9
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Showing 509 open source projects for "pipeline"
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CIRT
CIRT - CUDA Interactive Ray Tracer
CIRT is an implementation of PRTP (Programmable Ray Tracing Pipeline). Mainly it is to be used as a ray-tracing equivalent of OpenGL. It allows the user to implement various ray-tracing related algorithms. -
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Datapipe
Real-time, incremental ETL library for ML with record-level depend
Datapipe is a real-time, incremental ETL library for Python with record-level dependency tracking. Datapipe is designed to streamline the creation of data processing pipelines. It excels in scenarios where data is continuously changing, requiring pipelines to adapt and process only the modified data efficiently. This library tracks dependencies for each record in the pipeline, ensuring minimal and efficient data processing. -
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QuadRay-engine
Realtime raytracer using SIMD on ARM, MIPS, PPC and x86
QuadRay engine is a realtime raytracing project aimed at full SIMD utilization on ARM, MIPS, POWER and x86 architectures. The efficient use of SIMD is achieved by processing four rays at a time to match SIMD register width (hence the name). The rendering core of the engine is written in a unified SIMD assembler allowing single assembler code to be compatible with different processor architectures, thus reducing the need to maintain multiple parallel versions. At present, Intel... -
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GOBU
Gene Browsing Utility
Gene Ontology Browsing Utility (hereinafter, GOBU, pronounced as "go-boo") is a browsing and manipulating tool for Post-Pipeline genetic data, especially useful for data with GO annotations. With help of GOBU, we expect biologists and their cooperating technicians can pay less effort on common programming stuff. At the same time, GOBU provides an Extendable Architecture which guarantees the possibility of 1. Arbitrary Data Description, 2. Data Integration, and 3. Extendable User Interface. -
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SPiCEv2.1
Splicing Prediction in Consensus Element
SPiCE is no longer maintained. To access the tool's predictions, please use SPiP, accessible at : https://sourceforge.net/projects/splicing-prediction-pipeline/ or https://github.com/raphaelleman/SPiP If you have questions, please contact me to: r.leman@baclesse.unicancer.fr or raphael.leman@orange.fr v2.1.5 (05/2019) + corr (01/2020): Fix bug for linux version v2.1.4 (03/2019): Proxy management (only for Windows version) v2.1.3 (07/2018): correction bug for first 3' ss import vcf... -
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... residues (e.g. Leu-, SR-, PEST-rich motifs, etc.), (ii) searches for multiple pre-defined consensus patterns or experimentally validated functional motifs in large datasets protein sequences (proteome-wide), (iii) map UniProt and PROSITE flat files. ShettiMotif can parse large dataset of sequences efficiently. Article: Haitham Sobhy; A bioinformatics pipeline to search functional motifs within whole proteome data; poxviruses a case study; Virus Genes, 2017; doi: 10.1007/s11262-016-1416-9; PMID:
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asynframe framework
Development framework based on message driven provided
This is an SDK development framework based on message driven (including asynchronous IO events) , which provides basic interfaces such as thread、pipeline、file and network. 1. It can be easily integrated into MFC、SoUI、DUI and Qt6.x other systems 2. Implement equipment chain and provide unified equipment operation interface (including file、pipe and socket etc.) 3. Implement the basic network protocol module: dns /udp/tcp/ssl/ftp/http/rtsp/proxy/websocket 4. Implement high-precision... -
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Muse: Middleware Universal Scripting idE
DevOps Automate: WebSphere; WebLogic; JBoss; Glassfish; Tomcat; Linux.
Simplify... Aggregate... Automate... Simplify... *** OPEN SOURCE - GPL3/EPL. Use Python / Jython to automate WebSphere, WebLogic, JBoss, Glassfish and Tomcat Middleware Estates over JMX, both SSL and non-SSL + Linux SSH (agent-less). Target all 5 servers and Linux from the same workspace. Familiar Eclipse based Jython Development IDE, pre-configured and ready to go. 4-Click Installer. Win x64, Linux WINE x64. Built-In JVM. Java 8/9/10, Amazon Corretto, JETPack13/14/16, IBM... -
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FUNseq
Cell segmentation/tracking for determing aggresive cancer phenotypes
This page shows the cell segmentation/tracking program for FUNseq pipeline. Identifying a sparse subset of cancer cells from a large heterogeneous population, based on aggressive phenotypes (like invasive migration, multipolar divisions, or asymmetric lineage development) is challenging. Also, such aberration identification is critical, as cells exhibiting these characteristics are linearly correlated with poor prognosis. A high-throughput screening microscope has been developed in our... -
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A fungal genome annotation pipeline (funnote) integrated by CAIQ (Chinese Academy of Inspection and Quarantine). ## prerequisites 1. skewer (https://github.com/relipmoc/skewer) 2. BLAST (https://blast.ncbi.nlm.nih.gov/) 3. DIAMOND (https://github.com/bbuchfink/diamond) 4. funannotate (https://github.com/nextgenusfs/funannotate) 5. InterProScan (https://github.com/ebi-pf-team/interproscan) 6. emapper (https://github.com/eggnogdb/eggnog-mapper)
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HyperTools
A Python toolbox for gaining geometric insights
..., text or (mixed) lists. Applying topic models and other text vectorization methods to text data. HyperTools is designed to facilitate dimensionality reduction-based visual explorations of high-dimensional data. The basic pipeline is to feed in a high-dimensional dataset (or a series of high-dimensional datasets) and, in a single function call, reduce the dimensionality of the dataset(s) and create a plot. -
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Graph4NLP
Graph4nlp is the library for the easy use of Graph Neural Networks
Graph4NLP is an easy-to-use library for R&D at the intersection of Deep Learning on Graphs and Natural Language Processing (i.e., DLG4NLP). It provides both full implementations of state-of-the-art models for data scientists and also flexible interfaces to build customized models for researchers and developers with whole-pipeline support. Built upon highly-optimized runtime libraries including DGL , Graph4NLP has both high running efficiency and great extensibility. The architecture... -
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dataMAPPs
R based pipeline for MHC-associated peptide proteomics (MAPPs) data
dataMAPPs allows routine and efficient processing of data from immunogenicity studies applying the MAPPs peptidomics technology to detect potential MHCI- or MHC-II epitopes as presented by dendritic cells (DC). It features quality control of the raw data, across-sample/across-donor normalization and visualization of results in a heatmap style (heatMAPPs). dataMAPPs' core is a generic R library that can be tailored to specific projects via dedicated control scripts which also allow... -
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nligaStruct
Isogeometric structural analysis with Bézier extraction
nligaStruct is an extension of NLIGA in aspect of isogeometric structural analysis. A framework for Bézier extraction of T-spline and NURBS is embedded in the simulation pipeline. Both Reissner-Mindlin and Kirchhoff-Love assumptions are considered in the case of static bending and free vibration analysis of thin-walled structures (plates and shells). The convergence behaviors of these two assumptions for both plate and shell are thoroughly studied and compared. Three types of hyperelastic... -
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Apache SkyWalking Rocketbot UI
SkyWalking RocketBot UI
Application performance monitor tool for distributed systems, specially designed for microservices, cloud-native, and container-based (Kubernetes) architectures. End-to-end distributed tracing. Service topology analysis, service-centric observability and API dashboards. Java, .Net Core, PHP, NodeJS, Golang, LUA, Rust, C++, Client JavaScript and Python agents with active development and maintenance. Rover agent works as a metrics collector and profiler powered by eBPF to diagnose CPU and... -
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Spleeter
Deezer source separation library including pretrained models
... than real-time when run on a GPU. We designed Spleeter so you can use it straight from command line as well as directly in your own development pipeline as a Python library. It can be installed with Conda, with pip or be used with Docker. -
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GenTreat is a computational pipeline with an intuitive graphical interface, was developed for automated hybrid assembly of prokaryotic genomes, performs assembly using two assemblers, merges the results, and then orders and annotates the assembled genome. Validation using raw reads from 61 organisms demonstrated that is a viable alternative for automated hybrid assembly, eliminating the need for using extensive command lines.
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Pipeline for training Language Models
Pipeline for training Language Models using PyTorch.
Pipeline for training Language Models using PyTorch. Inspired by Yandex Data School NLP Course (week 03: Language Modeling) Prepared text file with space-separated words on each line. -
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Aquila DB
An easy to use Neural Search Engine
Aquila DB is a Neural search engine. In other words, it is a database to index Latent Vectors generated by ML models along with JSON Metadata to perform k-NN retrieval. It is dead simple to set up, language-agnostic, and drop in addition to your Machine Learning Applications. Aquila DB, as of current features is a ready solution for Machine Learning engineers and Data scientists to build Neural Information Retrieval applications out of the box with minimal dependencies. -
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Parakeet
PAddle PARAllel text-to-speech toolKIT
... their reference implementations in PaddlePaddle. Further more, Parakeet abstracts the TTS pipeline and standardizes the procedure of data preprocessing, common module sharing, model configuration, and the process of training and synthesis. The models supported here include Text FrontEnd, end-to-end Acoustic models and Vocoders. -
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TerraForge3D
3D Procedural Modelling and Procedural Texturing Tool in OpenGL/C++
What can this do? Generte 3D Terrain Procedrally Export Terrain mesh as OBJ You can write and test your own shaders An Inbuilt IDE for shaders Test under different lighting A 3D viewer A Node based as well as Layer based workflow Save the project(custom .terr3d files) Hieght map visualizer in node editor Wireframe mode Custom Lighiting Customizable Geometry Shaders included in rendering pipeline Skyboxes Multithreded Mesh Generation Expected Goals for Version 3 Add a lot more... -
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CueLake
Use SQL to build ELT pipelines on a data lakehouse
With CueLake, you can use SQL to build ELT (Extract, Load, Transform) pipelines on a data lakehouse. You write Spark SQL statements in Zeppelin notebooks. You then schedule these notebooks using workflows (DAGs). To extract and load incremental data, you write simple select statements. CueLake executes these statements against your databases and then merges incremental data into your data lakehouse (powered by Apache Iceberg). To transform data, you write SQL statements to create views and... -
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Redis Client for Crystal
Full featured Redis client for Crystal
A Redis client for the Crystal programming language. This Redis instance can be shared across fibers and accepts the same Redis commands as the Redis class. It automatically allocates and frees connections from/to the pool, per command. -
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Texthero
Text preprocessing, representation and visualization from zero to hero
Texthero is a python package to work with text data efficiently. It empowers NLP developers with a tool to quickly understand any text-based dataset and it provides a solid pipeline to clean and represent text data, from zero to hero. -
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Microsoft Integration
Microsoft Integration, Azure, Power Platform, Office 365 and much more
Microsoft Integration, Azure, BAPI, Office 365 and much more Stencils Pack it’s a Visio package that contains fully resizable Visio shapes (symbols/icons) that will help you to visually represent On-premise, Cloud or Hybrid Integration and Enterprise architectures scenarios (BizTalk Server, API Management, Logic Apps, Service Bus, Event Hub…), solutions diagrams and features or systems that use Microsoft Azure and related cloud and on-premises technologies in Visio 2016/2013.