Search Results for "data analysis" - Page 57
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Showing 2696 open source projects for "data analysis"
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newsscrape
news headline collecting for analysis in determining the category
newsscrape is web scraping for news headline to analyse on how it relates to a news category. - It extracts RSS feed from Google News. - Each news headline is matched against Google News category like Entertainment, Sports, etc. - Called from scheduler to collect this data at 5 minutes interval and be accumulated in a database. - It contains R statistical computing scripts to learn the pattern on words in the headline resulting a particular category. - To test its accuracy in... -
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Buridan
Tracker for buridan experiments, and analysis for trajectory data
Buritrack is a program to track individual Drosophila fruit flies online with any camera as they walk in Buridan's paradigm. Available for Macs and PCs. The program extracts the coordinate locations of the fly and stores them in a text file. CeTrAn: centroid trajectory analysis: Tools written in R to analyze the flies' trajectories. Other types of trajectories may also be analyzed using the software. -
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A 100% pure Java Swing ASN.1 analysis utility for inspecting arbitrary BER-encoded data files. It allows inspection of data with unknown structure, can drill down to any nesting level and allows to interpret embedded OCTET STRING data recursively.
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SPRITE
Parallel SNP detection pipeline
SPRITE is an open-source software package providing a parallel implementation of the Single Nucleotide Polymorphisms (SNP) detection genomic data analysis workflow. It consists of three tools: PRUNE for read alignment, SAMPA for intermediate file processing, and PARSNIP for parallel SNP calling. -
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XL Toolbox
Data analysis and visualization for Excel, for free
XL Toolbox is a free Excel statistics addin that helps analyzing and presenting data: Smart custom error bars, chart design, chart export to TIFF; formula builder, transpose wizard, analysis of variance (ANOVA); automatic backups, workbook management and more. -
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GNomEx
A Genomic LIMS and Data Repository
Our source code is now on GitHub: https://github.com/hci-gnomex/gnomex. Please refer to GitHub for the latest code. GNomEx is Genomic LIMS and Data Repository. It holds annotated experiments and downstream analysis and serves data tracks to popular genome browsers such as IGB, IGV, and UCSC genome browser. The LIMS handles all aspects of the experiment from order through results delivery. Experiment platforms supported include Illumina HiSeq, MiSeq, iScan, ABI Sanger sequencing, Affy and Agilent Microarrays, Sequenom MassArray and Bioanalyzer. ... -
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Cress Tool Suite
Cress is a comprehensive toolset for graphical service/workflow design
Cress (Communication Representation Employing Systematic Specification) allows graphical description of a wide variety of services such as in data communications/telecommunications, but Cress is not limited to this. The approach allows services to be described graphically as (work)flows of activities. Cress diagrams are automatically translated into formal languages for rigorous analysis and verification, and are also automatically translated into implementation languages for deployment and validation. ... -
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Moneyble Personal Finance
Free Personal Finance Excel-inspired app
Optimized for performance and ease of use. The app is designed for those who are using Excel today to track personal finances. All screens are spreadsheet-based to allow quick data entry and editing. You can customize what columns you want to see and how to name them. You can adjust Moneyble transaction spreadsheet to look like your existing Excel file. If you are just beginning to track your finances - Moneyble gives you a simple template for income/expense tracking, budgeting (weekly... -
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cbsPlot
A Matlab standalone application for Coherent Back Scattering analysis
This software will be extremely useful for researchers involved in the analysis of data in coherent back scattering experiments to characterize optical media such as random structures, light harvesting materials and random laser media. Specific features in this program enables easy, fast and reliable evaluation of the mean free path of light in random media along with error estimation. The program incorporates manual as well as automatic noise removal functionality. -
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Tool support for creating FMC* diagrams [Block diagrams, Petri nets, Entity-Relationship diagrams (ERD)] in MS-Visio 2000 and newer. Features: stencils, consistency checking, Petri net simulation, exporter e.g. pdf, ... *Fundamental Modeling Concepts A stripped down version of the stencil set is available for TAM (Technical Architecture Modeling of SAP). This set uses UML notation and contains Block, Activity, Sequence, State, Class, and Component diagrams. It doesn't contain Simulation,...
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Combenefit
Synergy analyses of drug and other other agent combinations
Combenefit software is a standalone application for Windows that performs surface analyses of drug and other agent combinations to identify synergy. Please cite as: "Di Veroli,G.Y. et al. (2016) Combenefit: an interactive platform for the analysis and visualization of drug combinations. Bioinformatics." (http://bioinformatics.oxfordjournals.org/content/early/2016/05/27/bioinformatics.btw230.abstract) Current version... -
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Corbata
CORe microBiome Analysis Tools
Corbata is a set of statistical tools that can be used to analyze the core microbiome across a set of samples. -
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ChelomEx
Isotope assisted discovery of metal chelating agents from LC-MS data
...The current version ChelomEx 1.2 from 06 January 2016 includes the following changes to the original version (ChelomEx 1.0): - function to filter discovered isotope patterns after the first analysis step (isotope pattern search), accessible in the Isotope Pattern toolbar (v1.2) - updates for compatibility with MatLab versions after 2014b (v1.2) - siderophore database update (v1.1) - can now also analyze negative mode data (v1.1) - bug fixes (v1.1) -
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DIA-Umpire
Computational analysis pipeline for DIA proteomics data
Computational package for identification and quantitation analysis of mass spectrometry-based proteomics data using data independent acquisition (DIA) -
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Stranded II Mod Viewer
Enables viewing and script correction of Stranded 2 game files
This is a C# .net 4.0 application created for opening custom modifications of the free Stranded 2 (http://www.strandedonline.de/s2_info.php) game files. Stranded 2 modifications require a lot of work with notepad and displaying the result can be difficult to see in game. This application displays the data found from combining the information in the game files in a simplified window for quick analysis of items, objects, building, combinations and units. It also has a certain amount of error checking when reading in scripts and can report back some simple errors in mods. Hovering over icons and text can and usually does provide additional information. ... -
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Bamformatics
Toolkit and GUI for sequencing data analysis
The Bamformatics project aims to provide a coherent and consistent approach to analysis of high-throughput sequencing data. Its toolkit includes, among others, programs to identify variants and to compute various types genomic tracks. It also provides a graphical user interface to facilitate general bioinformatic workflows. The project wiki contains further details. -
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Py3DN
Morphometric analysis and visualization of the 3D structure of neurons
...The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. Py3DN is described in the paper: Aguiar P et al, "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics, 2013, 11(4):393-403 doi: 10.1007/s12021-013-9188-z -
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...The new implemented units are then automatically integrated with the rest of the library. The base of available algorithms is steadily increasing and includes signal processing methods (Principal Component Analysis, Independent Component Analysis, Slow Feature Analysis), manifold learning methods ([Hessian] Locally Linear Embedding), several classifiers, probabilistic methods (Factor Analysis, RBM), data pre-processing methods, and many others.
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IAP.G2P
IAP - the Integrated Analysis Pipeline
The Integrated Analysis Platform (IAP) has been designed and developed to support the analysis of large-scale image data sets of different camera systems. It aims in bridging different data domains and in integrating different approaches to data analysis and post-processing. -
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orbkit (Moved to Github)
A Modular Python Toolbox for Cross-Platform Post-Processing of Quantum
PLEASE NOTE ORBKIT HAS BEEN MOVED TO https://github.com/orbkit/orbkit orbkit is a parallel Python program package for post-processing wave function data extracted from output files of MOLPRO (Molden File Format), TURBOMOLE (AOMix file format), GAMESS-US, PROAIMS/AIMPAC (wfn/wfx file format), and Gaussian (Output File and Formatted Checkpoint File) output files. Futhermore, an interface to cclib, a parser for quantum chemical logfiles, is provided. If you use orbkit in your work,... -
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MuWoC
Analysis of textual data using multiple word clouds.
A program for the analysis of categorized textual data using multiple word clouds. -
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MetaOpen
Metabolomics Bioinformatics Tools
...We use a number of high-throughput analytical platforms including multidimensional liquid chromatography-mass spectrometry (MDLC-MS) for proteomics, and for metabolomics; liquid chromatography-mass spectrometry (LC-MS), and comprehensive two-dimensional gas chromatography-mass spectrometry (GCxGC/TOF-MS). Each type of analysis affords limited analyte coverage of molecules present in a patient sample and therefore provides only a partial molecular profile for an individual patient. These diverse analytical data must be integrated with advanced bioinformatics methods for accurate evaluation of health and detection of disease susceptibility. -
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CanReg5 (moved to Github)
Canreg5 is a software package for population based cancer registries
...It has modules to do: data entry, quality control, consistency checks and basic analysis of the data It was designed with an emphasis on user friendliness, it has a modern user interface and is easy to navigate. Is available in several languages. (English, French, Spanish, Portuguese, Russian, Turkish, Georgian, and Chinese.) -
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PROMOT
A tool for finding functional motifs from aligned protein sequences
PROMOT (version 4.0) is a bioinformatics tool for discovering motifs (in the PROSITE format) from a set of aligned sequences. To run the tool, you need to have Java 8 installed on your system. Download and execute the JAR without any parameters to know about how to use the tool. A sample alignment of 91 protein sequences is also provided in the file "aligned.fasta". A sample run of the tool can be seen by using the following command: java -jar promot4.jar 70 2 n aligned.fasta >... -
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PanCGP
PanCGP: Pangenome and Comparative Genome Analysis Pipeline tool
Pan-genome and Comparative Genome analysis Pipeline tool is a high performance parallel computing analysis tool. The aim of developing this high performance and scalable pipeline is to reduce the time cost of calculating the pan-genomes from the given dataset of protein sequences of bacterial strains. The pipeline is able to compute pan-genome analysis from unpublished data-sets as well.