Showing 1591 open source projects for "general morphological analysis"

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  • 1
    DataEase

    DataEase

    Data visualization analysis tool

    An open source data visualization analysis tool available to everyone. DataEase is an open-source data visualization analysis tool that helps users quickly analyze data and gain insight into business trends, so as to achieve business improvement and optimization. DataEase supports rich data source connections, can quickly create charts by dragging and dropping, and can easily share with others. Supports rich chart types (Apache ECharts / AntV), supports drag-and-drop method to quickly create...
    Downloads: 8 This Week
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  • 2
    FieldTrip

    FieldTrip

    The MATLAB toolbox for MEG, EEG and iEEG analysis

    FieldTrip is the MATLAB software toolbox for MEG, EEG and iEEG analysis, which is released free of charge as open source software under the GNU general public license. FieldTrip is developed by members and collaborators of the Donders Institute for Brain, Cognition, and Behaviour at Radboud University, Nijmegen, the Netherlands. The toolbox offers advanced analysis methods of MEG, EEG, and invasive electrophysiological data, such as time-frequency analysis, source reconstruction using dipoles, distributed sources and beamformers and non-parametric statistical testing. ...
    Downloads: 0 This Week
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  • 3
    GROMACS

    GROMACS

    Public/backup repository of the GROMACS molecular simulation toolkit

    GROMACS is a molecular simulation toolkit focused on high-performance molecular dynamics. It is widely used for biomolecular systems such as proteins, lipids, nucleic acids, solvents, and ligand interactions. The software is optimized for speed and supports modern CPU and GPU acceleration for large and demanding simulations. It includes tools for system preparation, running simulations, trajectory processing, analysis, and workflow automation. GROMACS is especially strong in computational...
    Downloads: 13 This Week
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  • 4
    QGIS

    QGIS

    Cross platform (lin/win/mac) geographical information system (GIS)

    Create, edit, visualize, analyze and publish geospatial information on Windows, Mac, Linux, BSD and mobile devices. For your desktop, server, in your web browser and as developer libraries. QGIS is a user-friendly open-source Geographic Information System (GIS) licensed under the GNU General Public License. QGIS is an official project of the Open Source Geospatial Foundation (OSGeo). It runs on Linux, Unix, Mac OSX, Windows and Android and supports numerous vector, raster, and database...
    Downloads: 206 This Week
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  • 5
    Blender GIS

    Blender GIS

    Blender addons to make the bridge between Blender and geographic data

    Import in Blender most commons GIS data format, Shapefile vector, raster image, geotiff DEM, OpenStreetMap XML. There are a lot of possibilities to create a 3D terrain from geographic data with BlenderGIS, check the Flowchart to have an overview. Display dynamics web maps inside Blender 3d view, requests for OpenStreetMap data (buildings, roads, etc.), get true elevation data from the NASA SRTM mission. Manage georeferencing information of a scene, compute a terrain mesh by Delaunay...
    Downloads: 135 This Week
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  • 6
    MuJoCo

    MuJoCo

    Multi-Joint dynamics with Contact. A general purpose physics simulator

    MuJoCo, developed and maintained by Google DeepMind, is a high-performance physics engine designed for simulating complex, articulated systems that interact through contact. It is widely used in research fields such as robotics, biomechanics, computer graphics, animation, and machine learning, where fast and accurate physics simulations are essential. The engine provides a robust C API optimized for real-time computation, making it suitable for scientific research and advanced simulation...
    Downloads: 23 This Week
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  • 7
    Claude Scientific Skills

    Claude Scientific Skills

    A set of ready to use Agent Skills for research, science, engineering

    ...Overall, the repository acts as a modular capability layer that transforms general AI agents into domain-aware computational scientists.
    Downloads: 17 This Week
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  • 8
    LAMMPS

    LAMMPS

    Public development project of the LAMMPS MD software package

    LAMMPS is a large-scale classical molecular dynamics simulator for modeling atoms, molecules, coarse-grained particles, and other particle-based systems. It is designed for high-performance computing and can run efficiently on desktops, clusters, and supercomputers. The software is widely used in materials science, chemistry, physics, nanotechnology, soft matter, and computational engineering. It supports many interaction models, including pair potentials, many-body potentials, reactive...
    Downloads: 3 This Week
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  • 9
    Bowtie 2

    Bowtie 2

    A fast and sensitive gapped read aligner

    Bowtie 2 is a fast, memory-efficient genomic read aligner used to map sequencing reads against long reference sequences such as mammalian genomes. It is especially effective for reads ranging from around 50 bases to hundreds or thousands of characters, and it supports modern sequencing workflows that require gapped, local, and paired-end alignment. The tool builds compact FM-index-based reference indexes, keeping memory usage low even for large genomes like the human genome. Bowtie 2 outputs...
    Downloads: 0 This Week
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  • 10
    ProStack

    ProStack

    ProStack - a platform for image processing and analysis

    ProStack - a platform for image processing and analysis. It implements various image processing methods as separate modules, that can be joined in a complex image processing scenario by use of a graphical user interface. RPMs are available at https://build.opensuse.org/project/repositories/home:mackoel:compbio
    Downloads: 8 This Week
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  • 11
    OpenGXT - Geopatial Analysis Tools

    OpenGXT - Geopatial Analysis Tools

    Spatial Statistics Libraries & Tools for GeoTools, GeoServer, uDig

    The goal of this project is to provide a spatial statistics tools for Geotools, Geoserver WPS, uDig Statistics Toolbox. #. Online Documentation - http://opengxt.mangosystem.com/ #. GeoTools -Download gt-process-spatialstatistics-xx.x.jar file #. GeoServer - Download GeoServer-Extension-OpenGxT-x.xx.x.zip - Unzip and copy two files to the WEB-INF/lib directory of the GeoServer installation. - Restart GeoServer #. uDig 2.0.x Plugin Installation - Name: Spatial...
    Downloads: 3 This Week
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  • 12
    gretl

    gretl

    A cross-platform statistical package for econometric analysis

    gretl is a cross-platform software package for econometric analysis, written in the C programming language.
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    Downloads: 14,316 This Week
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  • 13
    SAGA GIS
    SAGA - System for Automated Geoscientific Analyses - is a Geographic Information System (GIS) software with immense capabilities for geodata processing and analysis. SAGA is programmed in the object oriented C++ language and supports the implementation of new functions with a very effective Application Programming Interface (API). Functions are organised as modules in framework independent Module Libraries and can be accessed via SAGA’s Graphical User Interface (GUI) or various scripting...
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    Downloads: 8,017 This Week
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  • 14
    iramuteq
    IRAMUTEQ : Interface de R pour les Analyses Multidimensionnelles de Textes et de Questionnaires. Logiciel de traitement de données pour des corpus texte ou de type individus/caractères. Permet notamment de réaliser des analyses de type "ALCESTE"
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    Downloads: 450 This Week
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  • 15
    XFLR5

    XFLR5

    XFLR5 is an analysis tool for airfoils, wings and planes

    xflr5 is a potential flow solver with built-in pre- and post- processing functionalities.
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    Downloads: 1,420 This Week
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  • 16
    Gwyddion

    Gwyddion

    Scanning probe microscopy data visualisation and analysis

    A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis.
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    Downloads: 1,174 This Week
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  • 17
    JAGS is Just Another Gibbs Sampler. It is a program for the statistical analysis of Bayesian hierarchical models by Markov Chain Monte Carlo.
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    Downloads: 2,067 This Week
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  • 18
    Kst is the fastest real-time large-dataset viewing and plotting tool available and has basic data analysis functionality. Kst contains many powerful built-in features and is expandable with plugins and extensions.
    Downloads: 21 This Week
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  • 19
    In addition to RPKM (Reads Per Kbp per Million reads) values, RACKJ computes read counts for exons and splicing events. In so doing, it is feasible to compare two samples and identify genes with most significant difference in exon(splicing)-level.
    Downloads: 0 This Week
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  • 20
    ProM is the comprehensive, extensible framework for process mining. Process Mining deals with the a-posteriori analysis of (business) processes using enactment logs.
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    Downloads: 16 This Week
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  • 21
    QSAS
    Analysis and display software targeted at space physics data. Installation instructions are at the bottom of the FILES directory. See documentation at https://qsas.sourceforge.io/QSAShelp/QSAS_help_index.html See also QSAS_Intro_June2018.pptx under FILES Contact: qsassupp@gmail.com E-Mail lists: qsas-users@lists.sourceforge.net qsas-discuss@lists.sourceforge.net
    Downloads: 20 This Week
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  • 22
    Plot Digitizer
    An easy to use Java program that allows you to digitize data points off of scanned plots, scaled drawings, or orthographic photographs. Includes an automatic digitization feature that can automatically digitize many types of functional data.
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    Downloads: 122 This Week
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  • 23
    Criterial

    Criterial

    The package for statistical data analysis and applied mathematics

    Putting truth before show-off. Criterial is an add-in for desktop versions of LibreOffice Calc (and forks) for statistical data analysis. The project is built on the refined expertise and core concepts of the AtteStat and StatAnt projects. Completely free. No donations required. Comes with absolutely no warranty. Rating: Everyone (All ages). MEDICAL DISCLAIMER: This software is not certified for use in healthcare and should not be used for diagnostic or treatment purposes. NOTICE FOR EU...
    Downloads: 6 This Week
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  • 24
    GMAT

    GMAT

    General Mission Analysis Tool

    The General Mission Analysis Tool (GMAT) is an open-source tool for space mission design and navigation. GMAT is developed by a team of NASA, private industry, and public and private contributors. The GMAT development team is pleased to announce the release of GMAT version R2026a. For a complete list of new features, compatibility changes, and bug fixes, see the R2026a Release Notes in the Users Guide.
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    Downloads: 839 This Week
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  • 25
    BioXTAS RAW

    BioXTAS RAW

    Processing and analysis of Small Angle X-ray Scattering (SAXS) data.

    BioXTAS RAW is a program for analysis of Small-Angle X-ray Scattering (SAXS) data. The software enables: creation of 1D scattering profiles from 2D detector images, standard data operations such as averaging and subtraction, analysis of radius of gyration (Rg) and molecular weight, and advanced analysis using GNOM and DAMMIF as well as electron density reconstructions using DENSS. It also allows easy processing of inline SEC-SAXS data and data deconvolution using the evolving factor analysis...
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    Downloads: 71 This Week
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