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Gavrog stands for "Generation, Analysis and Visualization of Reticular Ornaments using Gavrog". It is a Java library together with a suite of interactive applications for the study of periodic net-like structures in space and their applications.
The TIMTAM (Target Information Management Tracking And More) system implements a secure knowledgebase supporting the management, tracking, and analysis of experimental data associated with structural biology projects.
ChronoSVG generates a timing diagram, as used in electrical devices documentations, from a simple and intuitive ASCII source file. The output file is in SVG format, and makes use of CSS to defer the styling details to presentation time.
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TIDAL is a collection of data acquisition and processing tools for
research in respiratory physiology. It provides a high-level language for specifying experimental protocols and required computations.
ruby-sphere is a set of libraries and user interfaces written in Ruby to calculate apparent positions of stars with a moderate accuracy. Its goal is to provide an easy way to plan astronomical observations.
The SPELL gene expression explorer searches multiple datasets for related gene expression patterns.
Hibbs MA, et al. Exploring the functional landscape of gene expression: Directed search of large microarray compendia. Bioinformatics, 2007.
rSIGNAL - ruby Simple Inter-Interface Generic Aggregation Layer. It allows external data sources to be aggregated, store the aggregated data and print the aggregated data out in a transformed format to a file (or integrated HTTP server) on demand.
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Interactive mesh creation tool. Discretizer will create geometry and meshes for three dimensional flow simulations (CFD). Geometry import is not a goal: Discretizer will be furiously fast geometry builder(on many common engineering applications at least)
Ruby Research Wiki (RRiki) can be used to keep notes and organize references for research. It uses a browser interface, an intuitive plain text formatting language (markdown), and facilities to cross-reference and hierarchically organize notes
PORIS toolkit allows describing graph-based systems and their behavior in a snapshot. It provides a web
editor for a domain visual specific language (DSL) and transformation tools to generate software prototypes, system configurations, ...
A database schema and web application to archive, search, share, and download data of maximum body sizes of different taxonomic groups during the history of life on earth.
LabDiary is a program for managing laboratory experiments in a sophisticated way. It is very easy to use - you can link experiments logically with each other, associate files to an experiment and structure all your data.
SUBLEQ is a machine language in which there are no opcodes, the only operation available is substract and branch if negative or zero. This project offers a virtual machine for SUBLEQ programs. The included compiler allows you to write SUBLEQ more easy.
Netlist database and manipulation API with interfaces to Java and Ruby. Verilog netlist inputs are supported.
Project branch continues to evolve: https://github.com/gburdell/nldb
including addition of tclsh UI.
This is a recopilation of programs programmed by Eliot Hijano using either Java or Ruby. All the programs have something in common with both physics and Maths and are explained mathematically and physically in its own pdf.
ciperf is used to calculate the -b and -l values for iperf in order to produce a chosen udp packet throughput (overhead = 51 bytes) in respect to some variables which may change the calculation of the parameters (e.g. computers, links, ...).
LCS is an evidence-based medicine library consult service web application designed to facilitate physicians' use of the research literature. Physicians submit clinical questions to the system, librarians respond, and physicians rate the responses.
Tournament Director is a comprehensive software suite designed to aid tournament directors at quiz bowl tournaments. It tracks stats, creates schedules, designs handouts, and follows accepted conventions for sharing information.
JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts