Search Results for "physiology"
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Showing 20 open source projects for "physiology"
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Chromatone
Chromatone is a digital garden of visual music theory
Cards and short overviews on the physics and physiology of vision and hearing and their intersection at visual music research, exploration, practice, and self-expression. Useful tools to have in the pocket like a pack of interactive cards to learn and use in everyday music practice. These are open source web experiments with different aspects of sound and color. Chromatone is an open source research and design project to explore, develop and implement the scientific way of visual music education, communication and performance. ... -
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NeuroML is an XML-based description language for defining and exchanging neuronal cell, network and modeling data including reconstructions of cell anatomy, membrane physiology, electrophysiological data, network connectivity, and model specification
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Nokido
Local-first runtime for an artificial organism (GitHub mirror)
Nokido is a local-first runtime for an artificial organism: the nervous system and physiology that let local models, cloud providers and coding agents work together on your machine - routing, long-term memory with provenance, regulation, deterministic gates around actions, agent messaging, one hub reached through MCP. This SourceForge project is a read-only MIRROR: source of truth, issues, contributions, releases and CI live on GitHub (https://github.com/Nokido-labs/nokido), documentation in its wiki. ... -
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ATLAS_mPBPK
Modeling and Simulation of mPBPK models
ATLAS mPBPK is a MATLAb-based tool for modeling and Simulation of minimal Physiology Based Pharmacokinetic (mPBPK) models of small and large molecules. The tool enables the users to perform: i) PK data visualization, ii) simulation, iii) parameter optimization, and iv) local sensitivity analysis (SA) of mPBPK models in a simple and efficient manner. -
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larval fish Quirks
A comparative modeling tool for the study of marine fish larvae
Quirks simulates larval fish foraging behavior and growth physiology. -
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This project involves the development of a controlled vocabulary to describe traits (measurable or observable characteristics) pertaining to the morphology, physiology, or development of vertebrate organisms.
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KS Workbench
a set of scripts that helps you analyze physiology datasets
For the analyses of patch-clamp data (obtained from Igor/MME) using Python. The following modules are the minimum requirements: - Scipy (including numpy, matplotlib) - h5py In addition, following modules are required in order to fully make use of KS Workbench: - scikit-learn (for some fitting algorithms) - rpy2 (for some statistical analyses) -
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SmartRoot
Semi-automated root image analysis software
...To cite us: Guillaume Lobet, Loïc Pagès and Xavier Draye. A Novel Image Analysis Toolbox Enabling Quantitative Analysis of Root System Architecture. 2011 Plant Physiology, Vol. 157 -
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metawatt
Binner for assembled metagenomes
...The Metawatt is implemented in Java SWING and minimally depends on Diamond, HMMer3.1, BBMap, Prodigal and the Batik library for the export of SVG graphics. Citation: Strous M, Kraft B, Bisdorf R, TegetMeyer H (2012) The binning of metagenomic contigs for microbial physiology of mixed cultures. Frontiers in Microbial Physiology and Metabolism 3:410. doi: 10.3389/fmicb.2012.00410 -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Med Study Buddy
Physiology questions true-false, med-chem random cards to draw & Czech
Created to help students of medical school to study a large amount of questions. The functionality can be easily extended. -
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Manipulation and analysis of psychophysiological data (e.g. peripheral physiology, EEG, MEG). This toolbox has a special focus on time-frequency approaches, including amplitude and phase-synchrony. Developer Project Home: http://www.ccnlab.umd.edu/Psychophysiology_Toolbox/
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BioGears
Human Physiology Engine
This project has moved to GitHub https://github.com/BioGearsEngine/Engine -
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openhealthpractice
A simulation environment for physiology models simulation
The OpenHealhPractice Simulation Environment is a web framework intended to concurrently manage and launch generalized models. Models can be uploaded by the users and also can be connected to other models in order to simulate them in a row. These simulations are stored and can be reviewed or deleted at anytime. The Graphical Visualization Environment (GVE) provides the graphical visualization of the simulation results. Results can also be exported to different formats (xls, txt or... -
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TIDAL is a collection of data acquisition and processing tools for research in respiratory physiology. It provides a high-level language for specifying experimental protocols and required computations.
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ICATLite is a suite of software packages for capturing, cataloguing, describing and visualising analysed data and the analysis pipeline of processes. It is a sister project of ICAT, extending its capabilities to accommodate analysed data.
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...Polyworld is one of the earliest and most sophisticated artificial worlds developed to study Artificial Life and Artificial Intelligence, using computational genetics, physiology, metabolism, neural networks, learning, vision, and behavior.
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Test yourself with questions related to the basic subjects in medicine. Subjects included are Anatomy, Physiology, Biochemistry, Pathology, Pharmacology and Microbiology.
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jCpSim (Java CardioPulmonary Simulations) is a set of Java packages for simulation of human physiology (respiration, circulation, ...) and of medical therapy (ventilation, ...). Creation of user interfaces and therapy optimization is supported.
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ScientificIcons is a central repository of icons for scientific programs, including molecular biology, lab automation, sample tracking, chemistry, biology, physiology, etc. Looking for an icon for a flask, chemical, gene, plate, robot, atom?
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General Anesthesia Physiology Simulator for anaesthesiologic case reports, medical training (and testing) and educational purposes.
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