Showing 18 open source projects for "linux-gnome"

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  • Automate contact and company data extraction Icon
    Automate contact and company data extraction

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  • 1
    Seurat

    Seurat

    R toolkit for single cell genomics

    Seurat is a comprehensive R toolkit for single-cell genomics analysis, introduced by the Satija Lab at NYGC. It supports quality control, normalization, clustering, integration of multimodal data (e.g., scRNA‑seq, spatial, CITE‑seq), and visualization. Seurat v5 introduces scalable workflows and spatial transcriptomics support, commonly used in academic and industry research for single-cell studies.
    Downloads: 0 This Week
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  • 2
    broom

    broom

    Convert statistical analysis objects from R into tidy format

    broom is part of the tidymodels ecosystem that converts statistical model outputs (e.g. from lm, glm, t.test, lme4, etc.) into tidy tibbles — standardized data frames — using functions tidy(), glance(), and augment(). These are easier to manipulate, visualize, and report programmatically.
    Downloads: 0 This Week
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  • 3
    CausalImpact

    CausalImpact

    An R package for causal inference in time series

    The CausalImpact repository houses an R package that implements causal inference in time series using Bayesian structural time series models. Its goal is to estimate the effect of an intervention (e.g. a marketing campaign, policy change) on a time series outcome by predicting what would have happened in a counterfactual “no intervention” world. The package requires as input a response time series plus one or more control (covariate) time series that are assumed unaffected by the...
    Downloads: 0 This Week
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  • 4
    LabPlot

    LabPlot

    Data Visualization and Analysis

    LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone.
    Downloads: 46 This Week
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  • Total Network Visibility for Network Engineers and IT Managers Icon
    Total Network Visibility for Network Engineers and IT Managers

    Network monitoring and troubleshooting is hard. TotalView makes it easy.

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  • 5
    No-code system is for the visual creation of structural-functional models and the automatic generation of R language simulation models. The program can be used to describe information, production, organizational, and other processes. For graphical representation, the EdPM/EPM notation is used, which allowed us to implement: - structural-functional modeling using graphical methods; - the study of the efficiency of structural-functional models using simulation methods, that allow (e.g....
    Downloads: 0 This Week
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  • 6
    tidyverse

    tidyverse

    Easily install and load packages from the tidyverse

    tidyverse is a meta‑package that installs and loads a cohesive suite of R packages designed for data science, sharing underlying design principles, grammar, and data structures. Core components include ggplot2, dplyr, tidyr, readr, purrr, tibble, stringr, forcats, and more. It promotes tidy data workflows and consistency across tasks.
    Downloads: 0 This Week
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  • 7

    Vascular prediction

    Study develops predictive model to reduce 90-day readmissions.

    In recent years, hospital readmissions have increased, affecting public evaluations and pay-for-performance measures. A study developed a predictive model for 90-day hospital readmission in patients undergoing elective vascular procedures. The best predictive model was Shrinkage Discriminant Analysis, which considered variables such as length of stay, comorbidity scores, procedure type, and admission type. The model indicates that efforts to reduce vascular readmissions should prioritize...
    Downloads: 0 This Week
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  • 8
    OmicSelector

    OmicSelector

    Feature selection and deep learning modeling for omic biomarker study

    OmicSelector is an environment, Docker-based web application, and R package for biomarker signature selection (feature selection) from high-throughput experiments and others. It was initially developed for miRNA-seq (small RNA, smRNA-seq; hence the name was miRNAselector), RNA-seq and qPCR, but can be applied for every problem where numeric features should be selected to counteract overfitting of the models. Using our tool, you can choose features, like miRNAs, with the most significant...
    Downloads: 0 This Week
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  • 9
    geocompr

    geocompr

    Geocomputation with R: an open source book

    This repository hosts the source for Geocomputation with R, an open-source book covering spatial data analysis, visualization, and modeling using R. It teaches how to work with vector and raster data, coordinate systems, mapping, and geocomputation techniques using packages like sf, terra, tmap, and more. Actively maintained and updated for real-world geospatial workflows.
    Downloads: 0 This Week
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  • Say goodbye to broken revenue funnels and poor customer experiences Icon
    Say goodbye to broken revenue funnels and poor customer experiences

    Connect and coordinate your data, signals, tools, and people at every step of the customer journey.

    LeanData is a Demand Management solution that supports all go-to-market strategies such as account-based sales development, geo-based territories, and more. LeanData features a visual, intuitive workflow native to Salesforce that enables users to view their entire lead flow in one interface. LeanData allows users to access the drag-and-drop feature to route their leads. LeanData also features an algorithms match that uses multiple fields in Salesforce.
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  • 10
    osm4scala

    osm4scala

    Reading OpenStreetMap Pbf files.

    Scala and polyglot Spark library (Scala, PySpark, SparkSQL, ... ) focused on reading OpenStreetMap Pbf files.
    Downloads: 0 This Week
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  • 11

    miRPV

    miRPV: An automated pipeline for miRNA Prediction and Validation in si

    miRPV is an Automated tool that allows users to predict and validate microRNA from genome/gene sequence. System Requirement CPU: AMD64 (64bit) Memory: 2Gb RAM Storage: 5Gb Ubuntu 18.04
    Downloads: 0 This Week
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  • 12
    rethinking

    rethinking

    Statistical Rethinking course and book package

    This R package accompanies Richard McElreath’s Statistical Rethinking (2nd edition), offering utilities to fit and compare Bayesian models using both MAP estimation (quap) and Hamiltonian Monte Carlo via RStan (ulam). It supports specifying models via explicit distributional assumptions, providing flexibility for advanced statistical workflows.
    Downloads: 1 This Week
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  • 13
    KidneyExplorer

    KidneyExplorer

    Kidney proteomics data explorer enables you to investigate diseases

    KidneyExplorer enables you to interactively survey kidney proteomics datasets from different kidney disease models. Here you can download the corresponding SQL database dumps. The original website for the shiny app is: https://kidneyapp.shinyapps.io/kidneyorganoids/
    Downloads: 0 This Week
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  • 14

    QuantifyPoly(A)

    Quantification of poly(A) sites from 3' end sequencing data

    QuantifyPoly(A) - a tool for quantification of poly(A) sites from 3' end sequencing data. [1] QuantifyPoly(A) user manual Please visit the Wiki page of this website. [2] QuantifyPoly(A) Q&A For Q&A, please visit the Blog page of this website. [3] QuantifyPoly(A) bug report You can report a bug as a Ticket request, or start a topic session in the Discussion webpage of this website.
    Downloads: 13 This Week
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  • 15
    MitoSAlt

    MitoSAlt

    Identification of mitochondrial structural alterations

    MitoSAlt is a pipeline to identify large deletions and duplications in human and mouse mitochondrial genomes from next generation whole genome/exome sequencing data. The pipeline is capable of analyzing any circular genome in principle, as long as a proper configuration file is provided.
    Downloads: 15 This Week
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  • 16
    Reproducible-research

    Reproducible-research

    A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.

    In this tutorial, we describe a workflow to ensure long-term reproducibility of R-based data analyses. The workflow leverages established tools and practices from software engineering. It combines the benefits of various open-source software tools including R Markdown, Git, Make, and Docker, whose interplay ensures seamless integration of version management, dynamic report generation conforming to various journal styles, and full cross-platform and long-term computational reproducibility....
    Downloads: 0 This Week
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  • 17
    Pain2D
    Pain2D are programs which were developed for the automated pain drawing collection and classification of diseases on the basis of pain drawings in pen-and-paper and digital form for research purposes. Pain2D is currently not a diagnostic tool, but is aimed at scientists, physicians and anyone interested in the automated analysis of pain drawings.
    Downloads: 0 This Week
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  • 18
    TOFSIMS

    TOFSIMS

    R/Bioconductor toolkit for mass spectrometry data

    The tofsims project is an R/Bioconductor toolkit designed for processing, analyzing, and visualizing imaging mass spectrometry data from Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) instruments. It supports importing raw and preprocessed data from popular instrument platforms (e.g. IONTOF, Ulvac-Phi) and provides methods for mass calibration, peak picking, and peak integration. The package allows transformation of spectra into 2D image structures (mass images), with operations...
    Downloads: 0 This Week
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