MitoSAlt is a pipeline to identify large deletions and duplications in human and mouse mitochondrial genomes from next generation whole genome/exome sequencing data. The pipeline is capable of analyzing any circular genome in principle, as long as a proper configuration file is provided.

Features

  • Clinical Sequencing
  • Mitochondrial disease
  • Molecular signature

Project Samples

Installation Test run Output visualization

Project Activity

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Categories

Bio-Informatics

License

GNU General Public License version 3.0 (GPLv3)

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User Reviews

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  • claudia23 Posted 2021-04-22
    Thanks for developing this pipeline! Really useful for the mitochondrial community. Cheers, Claudia
    Reply from MitoSAlt
    Posted 2021-10-05
    Thank you Claudia, we hope that the pipeline helps answer several important questions pertaining to Mitochondrial genomics.
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Additional Project Details

Operating Systems

Linux

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl, R, Unix Shell

Related Categories

Unix Shell Bio-Informatics Software, Perl Bio-Informatics Software, R Bio-Informatics Software

Registered

2020-11-18
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