Open Source Python Scientific/Engineering Software - Page 88

This is a collection of Python functions, with which data can be exported from the Python environment to a file which can be viewed in GoogleEarth.

* Note: The Google Maps V2 API used by this module has been deprecated. * For V3, consider pygeocoder: https://pypi.python.org/pypi/pygeocoder Easy-to-use Python wrapper for the Google Maps V2 and Local Search APIs. Provides geocoding, reverse geocoding, directions, and local search.

User friendly interface for calculating electronic properties in graphene-like ribbons. The programs uses the tight binding approximation and mean field Hubbard model to predict electronic properties of graphene-like nanoribbons. See Discussion to ask questions or details Update: New versions of this program will be known as quantum-honeycomp

Tandem mass spectral peptide identification and validation software, similar to X!Tandem, OMSSA, MyriMatch. Suitable for single hosts through large clusters. Written in Python for simplicity, with performance-critical sections in C++.

Geo-Spatial Data Viewer (GSDView) is a lightweight viewer for geo-spatial data and products. It is written in python and Qt4 and uses the GDAL library. GSDView is modular and has a simple plug-in architecture.

Python binding for GNU Scientific Library using Cython for NumPy users.

*WARNING* gtburst moved to github (https://github.com/giacomov/gtburst). ########################################## gtBurst is a tool to download data, analyze and simulate Gamma-ray Bursts and Solar Flares as observed by the NASA Fermi satellite.

gtkhst is a collection of GLib2 objects to compute statistics (mean, variance, correlations) in 1 and 2 dimensions and a set of Gtk2 widgets to display 1D and 2D histograms as well as trace plots showing the evolution with time of the monitored quantity

A simple GUI frontend for the Microchip pk2cmd program written in python. At the minute it only supports writing. I plan to add reading and maintainance (renaming pickit2 devices, updating firmware) features soon.

Based on PyQwt (plotting widgets for PyQt4 graphical user interfaces) and on the scientific modules NumPy and SciPy, guiqwt is a Python library providing efficient 2D data-plotting features (curve/image visualization and related tools) for interactiv

a cross-platform framework and environment for haplotype analysis with a special focus on human and medical genetics in python/wxpython

Alpha test of an XML based HDF reader

hemcuveGUI is a graphical interface for HEMCUVE++ (see http://tsc.unex.es/~llandesa/page17/page17.html). More specifically, hemcuveGUI lets you · to collect all the data required by HEMCUVE++, · to manage a materials database, · to call the external executable HEMCUVE++ and · to visualize its results.

Collection of utilities to link together various simulation codes relevant to the analysis and optimisation of Human Powered Vehicles (HPVs)

This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of SNPs differs from the ancestral allele, it may be better explained as a mutation or sequencing error. But if a series of SNP alleles differ from the ancestral pattern, then it may be more likely that an HRE has occurred, particularly if the allele pattern matches that from another part of the tree better than that of the ancestral node.

This project collect several data mining methods, such as: 1) clustering methods; 2) biclustering methods; 3) FCA methods and etc.

A program to generate the Computer Numeric Code used by the huskystar C20 Sewing Machine

iDocs is a intellectual document work flow with text mining options project.

This is the public icram.de code repository filled with code/code-snippets and other useful stuff.

The python scripts are designed to work with data measured at id03 at the ESRF.

The BESSY II synchrotron is operated at the Helmholtz-Zentrum Berlin. Undulators are moveable magnetic structures that force the electron beam on a curved trajectory creating synchrotron radiation. This project is the undulator control software.

Tokenizer and translator for the IDL language, principally used with the IDL environment from ITTVis and GDL.

imbatcher is an image batcher and rfl Registax Frame List creator that use an Mean Square Difference algorithm to separate images from the same set automatically .

Search engine to help in user understanding of the concepts behind indexing, parsing, clustering, relevance feedback and ranking.

Python program devoted to study the relationship between cells during inmune response. It is based on a 3D periodic boundary conditions grid where cells see each other and react according to certain movement, growth and interaction rules.