Showing 81 open source projects for "matlab to python conversion"

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  • 1

    Gene-Environment iNteraction Simulator 2

    A tool able to simulate gene-environment and gene-gene interactions.

    Gene-Environment iNteraction Simulator 2 (GENS2) simulates interactions among two genetic and one environmental factor and also allows for epistatic interactions. GENS2 is based on data with realistic patterns of linkage disequilibrium, and imposes no limitations either on the number of individuals to be simulated or on number of non-predisposing genetic/environmental factors to be considered. The GENS2 tool is able to simulate gene-environment and gene-gene interactions. To make the...
    Downloads: 1 This Week
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  • 2
    This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
    Downloads: 0 This Week
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  • 3
    Toastpp

    Toastpp

    Forward and inverse modelling in optical tomography

    ...It allows 3D reconstruction of absorption and scattering distributions inside an object from boundary measurements of light transmission, using steady state, time domain or frequency domain information. Matlab and Python bindings exist for ease of use and fast prototyping.
    Downloads: 2 This Week
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  • 4
    WavePacket

    WavePacket

    Dynamics of quantum systems, controlled by external fields

    ...With its visualization of quantum dynamics generated 'on the fly', WavePacket is suitable for teaching quantum mechanics as well as for research projects, see also the numerous demonstration examples . While the Matlab/Octave version is already in a mature state, the C++/Python version is still under construction. Using tensor train techniques, the additional WaveTrain package aims at beating the curse of dimensionality.
    Downloads: 0 This Week
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  • 5
    Yet Another Audio Feature Extractor is a toolbox for audio analysis. Easy to use and efficient at extracting a large number of audio features simultaneously. WAV and MP3 files supported, or embedding in C++, Python or Matlab applications.
    Downloads: 0 This Week
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  • 6
    SPIW - Scanning Probe Image Wizard

    SPIW - Scanning Probe Image Wizard

    Scanning Probe Image Wizard - MATLAB Toolbox

    SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images.
    Downloads: 0 This Week
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  • 7
    NiftyRec
    This project, developed at UCL London, provides code for tomographic reconstruction. NiftyRec is written in C and has Python and Matlab extensions. Computationally intensive functions have a GPU accelerated version based on CUDA.
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    Downloads: 0 This Week
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  • 8
    IDL2Matlab is an Automatic translation tool from an IDL program into Matlab and Scilab code. We do not guaranty a 100% conversion efficiency.
    Downloads: 0 This Week
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  • 9
    psignifit is a toolbox to fit psychometric functions and test hypotheses on psychometric data. This is version 3 which will now predominantly support python.
    Downloads: 0 This Week
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  • 10
    ILNumerics.Net
    math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
    Downloads: 0 This Week
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  • 11

    LibppGam

    pp->gamma cross sections parametrization

    This library contains the parametrization of pp->gamma cross section functions based on Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369) work. The functions are written in Python, Fortran and Matlab. Please, if you use this library DO NOT reference to this webpage, instead reference to Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369), "Parametrization of gamma-ray production cross-sections for pp interactions in a broad proton energy range from the kinematic threshold to PeV energies" by Ervin Kafexhiu, Felix Aharonian, Andrew M. ...
    Downloads: 0 This Week
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  • 12
    C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
    Downloads: 0 This Week
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  • 13
    Ymap - Yeast Mapping Analysis Pipeline

    Ymap - Yeast Mapping Analysis Pipeline

    Pipeline for large-scale genome changes analysis of genome datasets.

    The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of...
    Downloads: 0 This Week
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  • 14

    LWPR

    Locally Weighted Projection Regression (LWPR)

    Locally Weighted Projection Regression (LWPR) is a fully incremental, online algorithm for non-linear function approximation in high dimensional spaces, capable of handling redundant and irrelevant input dimensions. At its core, it uses locally linear models, spanned by a small number of univariate regressions in selected directions in input space. A locally weighted variant of Partial Least Squares (PLS) is employed for doing the dimensionality reduction. Please cite: [1] Sethu...
    Downloads: 0 This Week
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  • 15

    RFlex

    Spectroradiometer control for shipborne reflectance measurements

    Spectroradiometer control for autonomous reflectance measurements from moving vessels. The software incorporates GPS signal parsing, control of the sensor platform viewing angle (stepper motor control), sensor triggering and data recording. Continue to the download section for the latest release information Rrs data processing code (the 'fingerprint technique') is also available - but moved to my github page: https://github.com/StefanSimis -------- Oct 2014: a beta version is...
    Downloads: 0 This Week
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  • 16
    MatrixUser

    MatrixUser

    A Multi-functional GUI-based Program for Image Processing and Analysis

    The MatrixUser project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MatrixUser/ Most of the medical images (e.g. CT, MRI, PET, etc.) comprises multiple frames which represent slices, phases, timing etc. from the same imaging object. Those images can be saved as multidimensional matrices in Matlab thanks to Matlab's powerful support of multidimensional data representation. However, within Matlab, most of image manipulation functions are limited or...
    Downloads: 0 This Week
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  • 17

    pymatlab

    A pythonic interface to MATLAB

    This package lets Python users interface and communicate with MATLAB from Python. Pymatlab makes it easier for users to integrate a project with a large MATLAB codebase into python scripts by using MATLAB scripts as a part of the python program. The basic functionality of this package is to send data from Python to MATLAB's workspace to be able to run Matlab function on the data. ...
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  • 18

    Matlab wind turbine model

    Generic Matlab model of a wind turbine drive train.

    This is a project to create a simple, open-source, simulation of a turbine suitable for use in wind or tidal streams in plain Octave/Matlab code. It will be designed to be suitable for integration with, and the testing of, some existing power take-off models. The drive train of the turbine will be modeled, with the scope of the model being the conversion of a given wind velocity to a torque at the input of a power take-off unit.
    Downloads: 0 This Week
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  • 19
    Constrained Manipulation Planning Suite

    Constrained Manipulation Planning Suite

    openrave plugins for constrained manipulation

    ...The planning and inverse kinematics algorithms in this suite are designed for articulated robots like robotic arms and humanoids. CoMPS is implemented in C++ and compiles in linux only. There are also several examples in python and matlab that show how to interface with openrave to use the plugins in CoMPS. It has been tested on all Ubuntu version from the last few years and will probably work with most modern linux distributions. Please see the wiki for installation and examples: https://sourceforge.net/p/comps/wiki/Home/
    Downloads: 0 This Week
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  • 20
    BRAHMS is a Modular Execution Framework for dynamical systems. It knits together independently-authored software modules implementing dynamical processes into an integrated system, and supervises the deployment and execution of that system.
    Downloads: 4 This Week
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  • 21
    OpenRAVE
    Moved to https://github.com/rdiankov/openrave An open-source, cross-platform, plugin-based robot planning environment for autonomous robotics. Includes services like collision detection, physics, (inverse) kinematics, sensors, robot controls, python bindings, and a network scripting environment.
    Downloads: 4 This Week
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  • 22
    Bifurcation Analysis Library
    A C++ library for the computation of bifurcation diagrams: it provides tools for the integration of systems of ODEs that depend on parameters. A Python interface is included.
    Downloads: 0 This Week
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  • 23
    Compilation of Physics Calculators

    Compilation of Physics Calculators

    A compliation of Physics derived claculators

    A NEW GUI VERSION WILL BE RELEASED SOON! Thank you for visiting the Physics Calculator, provided by PIezoSystems Inc., please visit their company website at https://piezosystems.org. For other downloads, please visit our github page, https://github.com/PiezoSystems. We hope that you find this program useful and easy to use, for troubleshooting, please email us, contact@piezosystems.org. If any bugs were found, please email us at bugs@piezosystems.org.
    Downloads: 0 This Week
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  • 24

    niftilib

    ** MAIN SITE IS NOW: https://github.com/NIFTI-Imaging/nifti_clib **

    niftilib is a collection of i/o routines for the nifti1 neuroimage data format. C (nifticlib), Java (niftijlib), Matlab (niftimatlib), and Python (pynifti) code is available. For nifti format info see: http://nifti.nimh.nih.gov/
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    Downloads: 15 This Week
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  • 25
    Ctrax is now hosted on Sourceforge (http://sourceforge.net/projects/ctrax). This Berlios site will no longer be maintained.
    Downloads: 0 This Week
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