Search Results for "remove"
Sort By:
Showing 39 open source projects for "remove"
View related business solutions-
Our Free Plans just got better! | Auth0You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.
-
Cloud tools for web scraping and data extractionAutomate web data collection with cloud tools that handle anti-bot measures, browser rendering, and data transformation out of the box. Extract content from any website, push to vector databases for RAG workflows, or pipe directly into your apps via API. Schedule runs, set up webhooks, and connect to your existing stack. Free tier available, then scale as you need to.
-
1
ParDRe
Parallel tool to remove duplicate DNA reads
ParDRe is a parallel tool to remove duplicate reads. Duplicate reads can be seen as identical or nearly identical sequences with some mismatches. This tool will let the users to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset (e.g., assemblies, mappings, etc.). The tool is implemented with MPI in order to exploit the parallel capabilities of multicore clusters. -
2
...Tool to compare the interfaces ( ports, parameters, SV interfaces ) between two versions of a Verilog module or two similar modules 7. Verilog Testbench Generator 8. VHDL Testbench Generator 9. Verilog Remove Assignments 10. Verilog Find Instances or Nets 11. Clock And Reset Tree Analyzer( Alpha)
-
3
Baya - SoC Integration Platform
Best in class SoC Integration Platform, IP-XACT, Verilog VHDL, UPF
...Maintains a connectivity database with advance queries 8. Hierarchy Manipulation to create Power Domain, Voltage Domain, comply with Floor planning 8.a. Insert new hierarchy 8.b. Remove existing hierarchy 9. Associate the IP-XACT memory maps with the SoC component instances 10. Dump out the C Model for the entire design 11. Glue-Logic insertion 12. Spare port insertion across hierarchies 13. Automatic creation of the top module and it's ports based upon specified rule 14. Creates stub module -
4
iGPS
An interactive tool for GNSS position time series analysis
* Please check latest update on https://github.com/igps-ftk/iGPS A tool written in Interactive Data Language (IDL), for processing and analyzing daily continuous GPS position time series. It can read time series in various formats, detect outliers, remove abnormal observation spans, find jumps, extract common-mode components(CMC), etc. -
Run applications fast and securely in a fully managed environmentRun frontend and backend services, batch jobs, deploy websites and applications, and queue processing workloads without the need to manage infrastructure.
-
5
remove the temporary files using Temp manager, and automate the operation (remove the files every 5 seconds). Built with python. Interface : Tkinter.
-
6
AOFlagger
RFI detector and quality analysis for astronomical radio observations
The AOFlagger is a tool that can find and remove radio-frequency interference (RFI) in radio astronomical observations. The code has been highly optimized for speed and accuracy. It is used by default for the LOFAR radio telescope and thus is in productional stage. The software can run in a fully automated way, but a graphical interface is provided to analyse results and tweak the strategy. -
7
MarDRe
MapReduce-based tool to remove duplicate DNA reads
MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. ... -
8
OpenChrom is a tool for gas chromatography and mass spectrometry. The focus is to handle data files from different GC/MS and GC/FID systems and vendors. Its functionality and algorithms can be extended using a flexible plugin approach, based on Eclipse RCP.
-
9
GNAT
GNAT recognizes gene names in text and maps them to NCBI Entrez Gene
GNAT is a BioNLP/text mining tool to recognize and identify gene/protein names in natural language text. It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID. March 2017: We started to upload GNAT output on Medline. See files/results/medline/. -
Employees get more done with RipplingEffortlessly manage the entire employee lifecycle, from hiring to benefits administration. Automate HR tasks, ensure compliance, and streamline approvals. Simplify IT with device management, software access, and compliance monitoring, all from one dashboard. Enjoy timely payroll, real-time financial visibility, and dynamic spend policies. Rippling empowers your business to save time, reduce costs, and enhance efficiency, allowing you to focus on growth. Experience the power of unified management with Rippling today.
-
10
SoAx
Structure of Arrays of multiple types
Structures of arrays (SoA) are generally faster than arrays of structures (AoS) while AoS are more handy. This project (SoAx) combines the advantages of both. By means of C++(11) meta-template programming SoAx achieves maximal performance (efficient use of vector units and cache of modern CPUs) while providing a very convenient user interface (including object-oriented element handling) and flexibility. It has been designed to handle list-like sets of particles (similar to struct {int id;... -
11
PRINSOW
STL viewer for 3D printing
...It is the first author contribution in the field of free software so any comment is welcomed. -------------------------------------------------------------------------- P.S. To use the software in french, just remove the file "prinsow_en.qm". -
12
ISVASE
identification of sequence variant associated with splicing event
To generate correct mature mRNAs, the exons must be identified and joined together precisely and efficiently by RNA splicing mechanism. It is to be noted that about one third or a half of all disease-causing mutations effect RNA splicing. However, there is little bioinformatics tools to directly identify sequence variants associated with splicing events (SVASE) based on RNA-seq data. We developed ISVASE, a simple and convenient tool for identifying SVASE directly using RNA-seq data.... -
13
dxf2pcb
Convert DXF drawings of circuit boards to gEDA-PCB files.
This Python script reads in a DXF (ascii) file and generates a PCB output compatible with PCB Designer, part of the gEDA suite. It is designed for two purposes: One is to generate a PCB snippet from a mechanical drawing (such as a board outline), the other is to produce element files from CAD drawings. PCB snippets are easily imported into an existing gEDA-PCB project using File -> Load Layout to Buffer. Generated element files are ready to use (except for special cases like no-paste... -
14
ParDRR-MPI
Parallel Duplicate Read Remover with MPI
ParDRR-MPI is a parallel tool to remove duplicate reads. Duplicate reads can be seen as identical or nearly identical sequences with some mismatches. This tool will let the users to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset (e.g., assemblies, mappings, etc.). The tool is implemented with MPI in order to exploit the parallel capabilities of multicore clusters. -
15
PRADA
PRADA : Pipeline for RNA-Sequencing Data Analysis
Massively parallel sequencing of cDNA reverse transcribed from RNA (RNASeq) provides an accurate estimate of the quantity and composition of mRNAs. To characterize the transcriptome through the analysis of RNA-seq data, we developed PRADA. PRADA focuses on the processing and analysis of gene expression estimates, supervised and unsupervised gene fusion identification, and supervised intragenic deletion identification. PRADA currently supports 7 modules to process and identify... -
16
miRNA Temporal Analyzer (mirnaTA)
Differential expression analysis tool for miRNAs in temporal studies
...It is implemented in Perl and R package (>= 2.13.0) and can be run across multiple platforms such as Linux, Mac and Windows. The mirnaTA requires that users provide data from a minimum of two time points and analyze up to 20 time points. To normalize data and remove technical variability, Normal Quantile Transformation (NQT) was used, and the normalized data is analyzed using linear regression model to locate any miRNAs which are differentially expressed in a linear manner. Any miRNAs with P-value<0.05 are considered statistically significant. Remaining miRNAs which did not fit in linear model are further analyzed in two different methods: (1) if the number of time points <3, CDF of the normal distribution, and (2) if the number of time points is >= 3, ANOVA is utilized. ... -
17
Time Management
Cory time management software
Cory time management software is a feature-rich system that helps you easily track employee attendance and paid time off. Our software runs on a web server and is accessible anywhere. -
18
DimerRemover
Remove adapter dimers from NGS data
This program can be used to count or remove adapter dimers in fastq files. Using a provided adapter sequence, it generates variations of this sequence and stores them in a hash table. The reads can then be directly matched against the hash. It is far more time efficient than doing alignment. -
19
PNP is a program for tutorial purposes in the signal processing area. It allows to set, move and remove poles and zeros of an one dimensional digital filter. The program shows different effects of the filter in the frequency domain.
-
20
Data Matrix
Java Api to manipulate simple on data of Matrix Type
Java Api to manipulate simple on data of Matrix Type. There is lot of usefull methods like resize, insert , remove, sort and lot of other methods. Usefull methods to manipulate with diagonals. For example you can create block diagonal matrix. There is lot of usefull methods to manipulate on mathematic matrix also, like determinant , norm , minor , cofactor , solveLienarSystem , arithmetic operations also and lot more. -
21
The DeconSeq tool can be used to automatically detect and efficiently remove sequence contamination from genomic and metagenomic datasets. It is easily configurable and provides a user-friendly interface. More at http://deconseq.sourceforge.net
-
22
TagCleaner is an application that is able to automatically detect and efficiently remove tag sequences from metagenomic datasets. It is easily configurable and provides a user-friendly interface.
-
23
-
24
trimMate is a tool to remove junction adapters as well as sequencing adapters from mate pair libraries and trim the sequences accordingly. It works on fastq files generated by next generation sequencing (NGS) machines. The release is source code only, please download from version control.
-
25
Polyhedra-in-MATLAB/Octave
Library for working with polyhedra
Allows user to convert from vertex to facet description and vice versa, convex union of two polyhedra, intercestion of two polyhedra, remove redundant vertices or inequalities from vertex or facet description.
