Search Results for "lab"
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Showing 123 open source projects for "lab"
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NVIDIA Isaac Lab
Unified framework for robot learning built on NVIDIA Isaac Sim
Isaac Lab is an open-source modular robotics learning framework built atop Isaac Sim. It simplifies research workflows across reinforcement learning, imitation learning, and motion planning by offering robust, GPU-accelerated simulation with realistic sensor and physics fidelity—ideal for sim-to-real robot training. Compatible and optimized for use with Isaac Sim versions (e.g., Sim 5.0 and 4.5). -
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Bambu Studio
PC Software for BambuLab and other 3D printers
...It is built on PrusaSlicer and Slic3r foundations while adding Bambu Lab’s own interface, optimized slicing behavior, and printer-focused tools. The software is especially suited for Bambu Lab printers, but its open-source base also makes it relevant to the broader 3D printing community. It helps users prepare models, manage projects, adjust slicing settings, preview toolpaths, and send print-ready files to compatible machines. Bambu Studio emphasizes ease of use without removing advanced controls needed for more complex prints. ... -
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MeshLab
The open source mesh processing system
...It is aimed to help the processing of the typical not-so-small unstructured models arising in 3D scanning, providing a set of tools for editing, cleaning, healing, inspecting, rendering and converting this kind of meshes. MeshLab is mostly based on the open source C++ mesh processing library VCGlib developed at the Visual Computing Lab of ISTI - CNR. VCG can be used as a stand-alone large-scale automated mesh processing pipeline, while MeshLab makes it easy to experiment with its algorithms interactively. The open source system for processing and editing 3D triangular meshes. It provides a set of tools for editing, cleaning, healing, inspecting, rendering, texturing and converting meshes. ... -
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Seurat
R toolkit for single cell genomics
Seurat is a comprehensive R toolkit for single-cell genomics analysis, introduced by the Satija Lab at NYGC. It supports quality control, normalization, clustering, integration of multimodal data (e.g., scRNA‑seq, spatial, CITE‑seq), and visualization. Seurat v5 introduces scalable workflows and spatial transcriptomics support, commonly used in academic and industry research for single-cell studies. -
Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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Qiskit
Qiskit is an open-source SDK for working with quantum computers
...When you are looking to start Qiskit, you have two options. You can start Qiskit locally, which is much more secure and private, or you get started with Jupyter Notebooks hosted in IBM Quantum Lab. Qiskit includes a comprehensive set of quantum gates and a variety of pre-built circuits so users at all levels can use Qiskit for research and application development. The transpiler translates Qiskit code into an optimized circuit using a backend’s native gate set, allowing users to program for any quantum processor or processor architecture with minimal inputs. ... -
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PICSimLab - Prog. IC Simulator Lab.
PICSimLab is a realtime emulator for PIC, Arduino, STM32, ESP32, ...
PICSimLab is a realtime emulator of development boards with MPLABX/avr-gdb debugger integration. PICSimLab supports microcontrollers from picsim, simavr, uCsim, qemu-stm32, qemu-esp32, and gpsim. PICSimLab has integration with MPLABX/Arduino IDE for programming the microcontroller's boards. As the purpose of PICSimLab is to emulate real hardware it does not have any source code editing support. For code editing and debugging the same tools used for a real board should be used with PICSimLab,... -
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OpenClinic GA
Open Source Integrated Hospital Information Management System
OpenClinic GA is an open source integrated hospital information management system covering management of administrative, financial, clinical, lab, x-ray, pharmacy, meals distribution and other data. Extensive statistical and reporting capabilities. OpenClinic GA and OpenClinic GMAO are owned by Frank Verbeke, MD, PhD at Post-Factum BV (https://www.post-factum.be) -
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GNU Health
GNU Health - The Free/Libre Hospital and Health Information System
GNU Health is the award-winning Hospital and Health Information System (HIS), declared a Digital Public Good and adopted by the United Nations . GNU Health Hospital and Lab information system is used by academic and research institutions around the globe. It is also used in public health system of countries such as Argentina, India, Jamaica, Laos, Cameroon, Suriname. GNU Health is an official GNU project. GNU Health is brought to you by GNU Solidario, an Non-Profit Organization (NGO) that focuses in Social Medicine. -
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QUAST
Quality Assessment Tool for Genome Assemblies
QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). ... -
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itom
itom - an Open Source Measurement, Automation and Evaluation Software
itom is an open source software suite for operating measurement systems, laboratory automation and data evaluation. One main application of itom is the development and operation of sensor and measurement system for instance in a laboratory environment. Therefore, the software has to be able to communicate with a wide range of different hardware systems, such as cameras or actuators and should provide a diversified and as complete as possible set of evaluation and data processing methods.... -
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PlateEditor
PlateEditor, a free web application to work with multi-well plates
... - PlateEditor is available at this address: https://plateeditor.sourceforge.io - The source code is also available on GitHub, visit: https://github.com/vindelorme/PlateEditor More information about the source code and the API are available there (the wiki is still under construction, thanks for your patience!) For a list of recent updates, visit: https://sourceforge.net/p/plateeditor/wiki/Updates/ Hoping PlateEditor will make your life easier in the lab! If yes, please cite us: https://doi.org/10.1371/journal.pone.0252488 -
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Firmware mod for the GWInstek GPP-x32x series lab bench supply.
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RAFTS³G
Rapid Alignment Free Tool for Sequences Similarity Search to Groups
...) % More informations about RAFTS3 in: https://sourceforge.net/projects/rafts3/ % Professional and Technical Education Sector from the Federal University of Paraná - Bioinformatic Lab. % Federal of Paraná University - UFPR % Dr. Alcides Vieira Arco-verde street, 1225 % CEP: 81520-260 Jardim das Américas % Curitiba – PR % Brazil % % Developers and colaborators: % Roberto T. Raittz % Bruno T. L. Nichio % Ricardo A. Vialle % Aryel M. R. de Oliveira % Camilla R. Pierri % Leticia G. ... -
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Robotics Lab
Open Source from the Robotics Lab research group @ UC3M
Welcome to the open branch of the Robotics Lab research group @ Universidad Carlos III de Madrid (UC3M). We currently host 3 main projects here: * ASIBOT open source software, which includes basic simulation, control and vision: http://roboticslab.sourceforge.net/asibot * Datasets we use for machine learning: https://sourceforge.net/projects/roboticslab/files/Datasets * Nicolas Burrus' RGBDemo stuff. -
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Hedgehog Lab
Run, compile and execute JavaScript for Scientific Computing
Hedgehog Lab is an open-source scientific computation tool in the browser. Before the development, Pleases make sure you are already installed and enabled the yarn. Once cloned, switch to the dev branch and navigate to the folder by typing cd hedgehog-lab and then running the provided commands. On each run the program compiles and it takes time. -
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MAGeCK
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
MAGeCK2 is here: https://github.com/davidliwei/mageck2 Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. We thank the support from Claudia Adams Barr Program in Innovative Basic Cancer Research and NIH/NHGRI to develop MAGeCK. -
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cccd
Simple astronomical CCD controller
This program supports TSNK-lab ICX285AL cameras, QHY5, QHY6, QHY9, QHY8L, QHY10, DSI2PRO, DSLR. It works with Mono images of 8, 12, 16 bits and RGB images of 24, 48 bits. Photo and video modes can be used. Histogram control of preview is available. There are two modes of capture: single frame mode and series. -
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Fast and efficient 3D pharmacophore search developed by the Camacho Lab (http://smoothdock.ccbb.pitt.edu) at the University of Pittsburgh. Source code is available through the svn repository.
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sciNote
Open source electronic lab notebook (ELN) for scientists
sciNote is an open source electronic lab notebook (ELN) that helps you manage your laboratory work and stores all your experimental data in one place. sciNote is specifically designed for life science students, researchers, lab technicians and group leaders. -
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Python4Proteomics Course
Python course for Proteomics analysis
Python course (in Spanish) for Proteomics analysis using basically Jupyter NoteBooks. For more information, you can have a look at the readme.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/p4p/code/ci/default/tree/readme.md -
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Skippity
Test and measurement automation for electronics, physics and more
GET INVOLVED - see General Discussion Skippity is a versatile script-based automation controller for test and measurement instrumentation. It’s ideal for use on the test bench or for automating experiments in the lab. Skippity doesn't rely on instrument specific vendor drivers so it can communicate with both legacy and current commercial instruments and also with devices you've designed and built yourself. Once you've told Skippity about your instruments and their commands using simple dialogs, you can use those definitions in scripts to create multi-instrument test sequences without worrying further about the specifics of your instruments. ... -
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FeRaL
Finite Element Rapid Analysis Lab
FEMM procedures to analyse rotating machines. -
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2D Structural Analysis
Determine the bending moments, shear forces, axial forces and displace
2D Structural Analysis in Python by Ritchie Vink A collection examples of 2D Finite Element Analysis (FEA) made with Jupyter Notebook Lab - https://jupyter.org/ To install Jupyter - https://jupyter.org/install ===== App is available on Play Store -> https://play.google.com/store/apps/details?id=com.ulm.struct If you want to download a python editor for your android smartphone follow this link -> https://play.google.com/store/apps/details?id=com.ulm.python -
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DrawGlycan-SNFG
Renders glycans and glycopeptides with frag. info using SNFG format
...How to Cite: DrawGlycan-SNFG: a robust tool to render glycans and glycopeptides with fragmentation information Kai Cheng; Yusen Zhou; Sriram Neelamegham Glycobiology (2017) 27 (3): 200-205 Source code also available at: https://github.com/neel-lab/DrawGlycan-SNFGv2 Abstract & Full Text: https://doi.org/10.1093/glycob/cww115 -
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...Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
