Showing 6989 open source projects for "c source code"

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  • 1
    STochastic Engine for Pathway Simulation
    Stochastic simulator for signaling pathways occuring in biological cells. Handles reaction-diffusion processes in 3D tetrahedral meshes. Please check our new repository: https://github.com/CNS-OIST/STEPS
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  • 2

    Advanced Numerical Instruments 3D

    Advanced numerical instruments: adaptive meshing, FE methods, solvers

    Ani3D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers.
    Downloads: 1 This Week
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  • 3
    Under this name are enclosed a number of applications useful to study the scattering of waves by (nano)particles of different shapes.
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  • 5
    CloudMIG Xpress

    CloudMIG Xpress

    Find the best suited cloud provider and deployment for your software

    To reduce resource over and under-provisioning, software systems can be migrated to IaaS and PaaS-based cloud environments. However, aligning and optimizing existing software systems for a cloud computing foundation often involves substantial reengineering activities or at least an elaborated configuration during the migration. There exist various challenges that have to be addressed, for example, systematically comparing cloud environment candidates, checking the conformance with...
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  • 6
    ...Though, initially developed for experiments related to fretting wear but can be effectively used to interpret experimental data from any field. The attached files contain source code as well as a sample MATLAB (.mat) data file of 13 variables. It could be replaced to the data file of your choice. The code is open source but you are requested to give credits if used. Additionally, it also has some useful functions for exporting and generating publication quality figures for different kind of figures in MATLAB
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  • 7
    Coffee-Physics

    Coffee-Physics

    A simple, lightweight physics engine written in CoffeeScript

    Coffee-Physics is a minimalist physics engine written in CoffeeScript that favors approachable, creative-coding workflows over heavyweight simulation frameworks. It models motion with a particle system and uses simple constraints and behaviors—such as gravity, attraction/repulsion, drag, and springs—to create believable movement with very little code. The design is intentionally composable: you attach behaviors to particles or groups and let the update loop integrate positions, producing...
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  • 8

    nccmp

    Compare two NetCDF files in-place.

    We've moved to Gitlab! (gitlab.com/remikz/nccmp) Compares two NetCDF files in-place to find specific variables, dimensions and/or attributes that differ. Highly recommended for any test-driven environment and regression testing large datasets.
    Downloads: 4 This Week
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  • 9

    LightPCC

    Parallel pairwise correlation computation on Intel Xeon Phi clusters

    The first parallel and distributed library for pairwise correlation/dependence computation on Intel Xeon Phi clusters. This library is written in C++ template classes and achieves high speed by exploring the SIMD-instruction-level and thread-level parallelism within Xeon Phis as well as accelerator-level parallelism among multiple Xeon Phis. To facilitate balanced workload distribution, we have proposed a general framework for symmetric all-pairs computation by building provable bijective...
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    GQGMC

    Driver for GQ LLC GMC-300 Geiger Counter

    GQGMC is a user level driver for interfacing a Linux host to GQ Electronic's GMC-300 geiger-muller counter. Written in C++, the driver provides an interface method for each of the capabilities of the GMC-300. A sample command line text only program and sample Qt based GUI program are provided.
    Downloads: 2 This Week
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  • 11

    DarlandPhilosophy

    Dennis J. Darland's Philosophy

    Representation of my philosophy (currently limited to philosophy of language) in the languages Prolog or Life. These languages must be acquired separately and Ruby is also needed. However the main purpose is to show how some philosophy problems can be solved. The source code and output are sufficient for that.
    Downloads: 0 This Week
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  • 12
    ViralFusionSeq [VFS]

    ViralFusionSeq [VFS]

    Accurately discover viral integration events and fusion transcripts

    ...VFS combines soft-clipping information, read-pair analysis, and targeted de novo assembly to discover and annotate viral-human fusion events. A simple yet effective empirical statistical model is used to evaluate the quality of fusion breakpoints. Minimal user defined parameters are required. Source code with user manual and installation guide of VFS is available at sourceforge's "Files" section. Citation: http://www.ncbi.nlm.nih.gov/pubmed/
    Downloads: 1 This Week
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  • 13

    Involute Gears DXF

    Open DXFs with QCad

    Program draws a gears tooth for reference profile and Fellows manufacturing. Open dxfs with qcad or Solid Works, ec but not with AutoCad. Autodesk has remouved support for enteties only format.It compiles well with OpenWatcom 1.9 c++ compiler.
    Downloads: 1 This Week
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  • 14
    BarraCUDA Fast Short Read Aligner
    Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
    Downloads: 2 This Week
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  • 15
    UnityConverter

    UnityConverter

    Simple software to convert many kinds of unity.

    Unity Converter is the software, which have really good tools to convert many kinds of unity, it helps people whose works with physics too much, and also people who are engineer.
    Downloads: 1 This Week
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  • 16
    LAMA

    LAMA

    Heterogeneous Software Development Accelerated

    LAMA is a framework for developing hardware-independent, high performance code for heterogeneous computing systems. It facilitates the development of fast and scalable software that can be deployed on nearly every type of system with a single code base. By using LAMA for their application, software developers benefit from higher productivity and stay up to date with the latest hardware innovations, both leading to shorter time-to-market. The framework supports multiple target platforms...
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  • 17
    This software is for processing binary Doppler radar data in, but not limited to, DORADE sweepfile format. The software can modify metadata and moment data using quality control routines and extract moment data as comma-delimited ASCII files.
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  • 18

    RAtom

    solves nonlinear Kohn-Sham equation for the neutral atom.

    RAtom solves nonlinear Kohn-Sham equation for the neutral atom. The adaptive algorithm based on finite element method (FEM) is implemented. Discretization of the differential eigenvalue problem is done by finite element method with Lobatto polynomials as a basis functions. High order Gauss quadratures are applied in order to obtain the total energy of atom with absolut accuracy of 1E-6 hartree. Disctretization leads to generalized eigenvalue problem, which is solved by procedures from...
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  • 19

    TIDBITS GIS converter

    Batch convert Lat/Long to UTM for Zone 19

    This simple R code converts GPS coordinates from Decimal Degrees or Degrees Minutes Seconds format to Northings and Eastings in UTM Zone 19. Coordinates should be entered as a .csv containing the column names "Latitude" and "Longitude" (capitalization does not matter). The code was designed primarily for use by researchers at the University of Maine working on the Penobscot River, but could be easily modified to handle other UTM Zones.
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  • 20
    CANpie
    This project defines a Standard API for access to the CAN (Controller Area Network) bus. The API provides functionality for ISO/OSI Layer-2 (Data Link Layer). The project is now hosted on GitHub: https://github.com/canpie/CANpie
    Downloads: 1 This Week
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  • 21
    The Virtual Geometry Model (VGM) provides abstract interfaces to geometry objects and functions for conversion between supported geometry formats (Geant4, Root, GDML, AGDD).
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  • 22

    HZDR

    Scripts and programs (e. g. THz-Shaker) for work in HZDR

    Scripts for evaluation and whole programs for measurements from work in Helmholtz-Zentrum Dresden Rossendorf (www.hzdr.de). One main project was the THz-Shaker (incl. THz-LiveCam and THz-Viewer) as complete new measurement framework. See Code (https://sourceforge.net/p/hzdr/code/) for files. A special thing is the wrapped CsAPI for GaGe CompuScope cards (e. g. Octopus) into Python: https://sourceforge.net/p/hzdr/code/HEAD/tree/thzshaker/device/scope/csapi.py An example of usage can...
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  • 23
    Fast Neurite Tracer

    Fast Neurite Tracer

    Semi-automatic neurite tracing with tera-bytes of imaging data.

    Fast Neurite Tracer (FNT) is a tool for semi-automated neurite tracing. FNT can handle big imaging data such as fMOST data. It can also process other types of light imaging data in general. FNT is designed to be * accurate in tracing (each tracing step needs your confirmation), * fast (operations using computer mouse is reduced with automatic searching), * scalable (large volume data of tera-bytes in size are supported). Other features include * the results can be exported to...
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  • 24
    We developed a systematic algorithmic solution for quantitative drug sensitivity scoring (DSS), based on continuous modeling and integration of multiple dose-response relationships in high-throughput compound testing studies. License: The DSS R-package is made available under the terms of the GNU General Public License, which means that the source code is freely available for use within other software, but if you alter the code and distribute it, you must make the new source code freely available as well. This software is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY. In case you use the package in your work, we do appreciate a citation to a DSS publication. ...
    Downloads: 1 This Week
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  • 25
    3DimViewer

    3DimViewer

    3DimViewer is a lightweight 3D viewer of medical DICOM datasets.

    3DimViewer is a lightweight 3D viewer of medical DICOM datasets that is distributed as open source software. The viewer is multiplatform software written in C++ that runs on Windows, Mac OS X and Linux systems. 3DimViewer source codes are available on Bitbucket (https://bitbucket.org/3dimlab/3dimviewer). Video tutorials can be found on YouTube (https://www.youtube.com/playlist?list=PLCvwUmKRw9ZO4YexLKEXmw_2jPo-kXVRn).
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    Downloads: 54 This Week
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