Search Results for "gnu linux" - Page 34
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Showing 10191 open source projects for "gnu linux"
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Allelome.PRO
A pipeline to define allele-specific genomic features
Detecting allelic biases from high-throughput sequencing data requires an approach that maximises sensitivity while minimizing false positives. Here we present Allelome.PRO, an automated userfriendly bioinformatics pipeline, which uses high-throughput sequencing data from reciprocal crosses of two genetically distinct mouse strains to detect allele-specific expression and chromatin modifications. Allelome.PRO extends approaches used in previous studies that exclusively... -
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Zarja
Agent-based simulation toolkit
It is an open source scientific library that is focused on multi-agent simulations on graphs. It prepares basic toolkit for agents, models, timers, graphs, nodes and edges. It is also accompanied with tools for data processing. -
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Open Grid Analysis and Display System
OpenGrADS provides extensions and interfaces for GrADS.
The Grid Analysis and Display System (GrADS) is an interactive desktop tool for easy access, manipulation, and visualization of earth science data. The OpenGrADS Project seeks to develop advanced interfaces and extensions based on the main GrADS engine. -
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Blenbridge
Finite element mesh from Blender objects.
Hexahedral finite element mesh from Blender. Fun! Useful with Elmer, Calculix, Gmsh, IA-FEMesh, Febio, others. Documentation available here in PDF format, or on the locally hosted Blenbridge website in HTML format. Video tutorials are also available. (Additional console versions are available for linux and windows, with fewer features but with greater execution speed, and the advantage of being scriptable.) -
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Re-face
Re-face is a helper applet tied to Lifted and Hexi projects.
In the manual improvement of hexahedral elements, faces belonging to incomplete elements are subject to loss during two format conversion steps. Re-face retrieves the lost faces, restoring the composition and integrity of the parent mesh. -
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VISTAS (VCSEL Integrated Spatio-Temporal Advanced Simulator) is a highly efficient 2D, time-domain Vertical-Cavity Surface-Emitting Laser (VCSEL) model aimed at optimizing entire optical links.
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Towhee is a Monte Carlo molecular simulation code originally designed for the prediction of fluid phase equilibria using atom-based force fields and the Gibbs ensemble with particular attention paid to algorithms addressing molecule conformation sampling.
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DynaQ
Innovative text document search. http://dynaq.opendfki.de for details.
The goal of DynaQ is to develop an inquiry system to explore the personal information space, supporting you with the searching paradigm 'orienteering'. DynaQ is a (desktop)search engine with enhanced functionality for file, email and blog search. Look at our GitLab homepage for sourcecode and documentation: http://dynaq.opendfki.de -
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eLogSim
Digital circuit simulator
eLogSim is an event driven, 4-level (0,X,1,Z) digital circuit simulator. It uses a test oriented stimulus approach and offers a statistical (or exhaustive if it makes sense) fault simulation option. eLogSim has a simple GUI and is pre-compiled for Ubuntu 20, Mint 20, CentOS 8, openSUSE 15, FreeBSD 12, Solaris 11, Windows 10/11 & Raspbian/Raspberry PiOS Buster (32/64bit) & Ubuntu-MATE 20.04 (64 bit) operating systems. Cross platform & -network, concurrent fault simulation now available.... -
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StatisticsTables
This is a Java APP for Probability and Statistics Tables
If you have Windows or a MAC , you can setup and run Statistics Tables with very little effort. You can use jdistabs in place of paper Probability Tables to get electronic probabilities. You can also download the Java code used to create this APP. There are 2 zips. One is for a working windows APP, and the other with complete code and file structure. I used Eclipse to develop the APP. Click the link you want to download to get the Statistics Tables Windows.exe or OS X zipped files. ... -
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Calculate Sunrise, Sunset and dawn times. The calculation based on sunriset by Paul Schlyter. 64 bit windows users: There are 64 bit windows binarys in the file section.
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kAtomics
Geometric kernel for CAD programs using an atomic approach
This kernel uses a discrete approach where the geometry is split into "atoms" at a fixed resolution (e.g. 1µm). The aim is to make full use of the parallel processing capabilities of modern graphics hardware. -
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OpenNum
OpenNum lets you distribute solvers with a nice graphical interface
Typically, to program a GUI is time consuming and requires experience with graphic libraries. OpenNum lets you create a graphical interface adapted to your solvers by simply editing an XML configuration file. More specifically, OpenNum lets you · to collect a hierarchical dataset, · to call any executable file and · to visualize scalar and vector fields, plot graphs or show simple plain text files. It also has other useful utilities specifically designed for numerical... -
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QccPack provides an open-source collection of library routines and utility programs for quantization, compression, and coding of data.
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QuantifyPoly(A)
Quantification of poly(A) sites from 3' end sequencing data
QuantifyPoly(A) - a tool for quantification of poly(A) sites from 3' end sequencing data. [1] QuantifyPoly(A) user manual Please visit the Wiki page of this website. [2] QuantifyPoly(A) Q&A For Q&A, please visit the Blog page of this website. [3] QuantifyPoly(A) bug report You can report a bug as a Ticket request, or start a topic session in the Discussion webpage of this website. -
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Pushloc
A wireless push-type network simulator.
A wireless push-type network simulator that considers locality of demand for performance improvement. The network environment consists of multiple directed emitters for parallel data broadcasting. Performance depends on the mean response time of clients. -
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SMTracker (v1.5, v2.0)
A tool for analysis and visualization of single-molecule tracking data
SMTracker v2.0 is a MATLAB-based graphical user interface (GUI) for automatically quantifying, visualising and managing SMT data via five interactive panels, allowing the user to interactively explore tracking data from several conditions, movies and cells on a track-by- track basis. Diffusion parameters and motion behaviour is analysed by several methods: a) by a Gaussian mixture model ,or b) by using the cumulative probability distribution of square displacements, c) Mean-Squared... -
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This is an application generator for conflation algorithms in perl language. This system supports generation perl source code for a stemmer from a rule file, running a stemmer which is supported by the system, parsing a corpus file.
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DWDS/Dialing Concordance
a collection of indexing and search tools for corpus linguists
DWDS/Dialing Concordance (DDC) - a collection of index and search tools for corpus linguists -
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ATTinyCore Universal
Arduino core for ATtiny 1634, 828, x313, x4, x41, x5, x61, x7 and x8
Arduino support for almost every classic tinyAVR device! Supports ATtiny 1634, 2313/4313, 24/44/84, 441/841, 25/45/85, 261/461/861, 87/167, 48/88, 43 and 828. Supports programming vis ISP, Serial (Optiboot - all parts with >4k flash, and all parts with 4k flash for which an 8k version is available) or VUSB (Micronucleus - where appropriate) There are 272 different versions of micronucleus built (and part of the 2.0.0-dev branch now), and optiboot will dwarf that number! 0 of those have been... -
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HMD Mathematics
Numerical mathematics platform, Matlab alternative
Matlab alternative. Scilab alternative. GNU Octave alternative. Mathematics software for numerical computation. Ordinary differential equations solver and finite elements solver. It has a console script interpreter, as well as a graphical interface script interpreter, for entering equations and statements, and a line plot display. -
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GMP Fortran library
Fortran binding for GMP library
Fortran binding for GMP library. Currently gfortran compiler supported on Linux and MS Windows (MinGW) platforms. Included Fortran program for solving Archimedes's cattle problem. -
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MitoSAlt
Identification of mitochondrial structural alterations
MitoSAlt is a pipeline to identify large deletions and duplications in human and mouse mitochondrial genomes from next generation whole genome/exome sequencing data. The pipeline is capable of analyzing any circular genome in principle, as long as a proper configuration file is provided. -
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Strumenti
Gestione delle tarature e verifiche periodiche della strumentazione
Strumenti è un programma per la gestione delle tarature e verifiche periodiche delle strumentazioni di processo o degli elementi di un impianto industriale. E' nato focalizzandosi sui seguenti punti : - Semplice nell'uso - Senza necessità di installazione - Possibilità di utilizzarlo da una chiavetta USB - Possibilità di generare Report e di modificarli per adattarli alle proprie esigenze - Multipiattaforma Sostanzialmente un coltellino svizzero per lo strumentista o per chi si...
